EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTSYG00000004979 (Gene tree)
Gene ID: 103259355
Gene Symbol: SND1
Alias: TDRD11|p100
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Minus strand
Length: 326760 bases
Position: chrKE938866.1:6992-333751
Accession: 103259355
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000004555	SNase	PF00565.17	7.2e-49	1	3
ENSTSYP00000004555	SNase	PF00565.17	7.2e-49	2	3
ENSTSYP00000004555	SNase	PF00565.17	7.2e-49	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000004979	SND1-201	1782	XM_008057030	ENSTSYP00000004555	593 (aa)	-	UPI000C2F3200

Gene Model

Click here to download ENSTSYG00000004979's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000004979's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000004979	SND1	96	99.472	ENSG00000197157	SND1	73	99.472	Homo_sapiens
ENSTSYG00000004979	SND1	96	87.368	ENSAPOG00000017599	snd1	70	87.368	Acanthochromis_polyacanthus
ENSTSYG00000004979	SND1	96	98.596	ENSAMEG00000004664	SND1	69	98.596	Ailuropoda_melanoleuca
ENSTSYG00000004979	SND1	96	83.128	ENSACIG00000003551	snd1	69	83.128	Amphilophus_citrinellus
ENSTSYG00000004979	SND1	96	87.193	ENSAOCG00000014166	snd1	70	87.193	Amphiprion_ocellaris
ENSTSYG00000004979	SND1	96	87.193	ENSAPEG00000007067	snd1	70	87.193	Amphiprion_percula
ENSTSYG00000004979	SND1	96	87.719	ENSATEG00000018475	snd1	64	87.719	Anabas_testudineus
ENSTSYG00000004979	SND1	96	99.120	ENSANAG00000034463	SND1	75	98.774	Aotus_nancymaae
ENSTSYG00000004979	SND1	96	86.667	ENSACLG00000022897	snd1	70	86.667	Astatotilapia_calliptera
ENSTSYG00000004979	SND1	96	87.762	ENSAMXG00000016318	snd1	74	87.762	Astyanax_mexicanus
ENSTSYG00000004979	SND1	96	98.592	ENSBTAG00000010692	SND1	73	98.592	Bos_taurus
ENSTSYG00000004979	SND1	96	51.993	WBGene00006626	tsn-1	75	51.993	Caenorhabditis_elegans
ENSTSYG00000004979	SND1	96	98.768	ENSCJAG00000017668	SND1	75	98.424	Callithrix_jacchus
ENSTSYG00000004979	SND1	96	99.296	ENSCAFG00000001700	SND1	73	99.296	Canis_familiaris
ENSTSYG00000004979	SND1	96	99.296	ENSCAFG00020021639	SND1	73	99.296	Canis_lupus_dingo
ENSTSYG00000004979	SND1	96	99.120	ENSCHIG00000023390	SND1	74	98.946	Capra_hircus
ENSTSYG00000004979	SND1	96	86.316	ENSCAPG00000010677	SND1	78	86.316	Cavia_aperea
ENSTSYG00000004979	SND1	96	98.944	ENSCPOG00000006251	SND1	73	98.944	Cavia_porcellus
ENSTSYG00000004979	SND1	96	99.296	ENSCCAG00000036847	SND1	74	99.296	Cebus_capucinus
ENSTSYG00000004979	SND1	96	99.472	ENSCATG00000035214	SND1	75	99.297	Cercocebus_atys
ENSTSYG00000004979	SND1	96	98.944	ENSCLAG00000011796	SND1	94	98.087	Chinchilla_lanigera
ENSTSYG00000004979	SND1	96	99.472	ENSCSAG00000010182	SND1	73	99.472	Chlorocebus_sabaeus
ENSTSYG00000004979	SND1	97	73.545	ENSCHOG00000002218	SND1	73	73.545	Choloepus_hoffmanni
ENSTSYG00000004979	SND1	96	95.070	ENSCPBG00000018094	SND1	73	95.070	Chrysemys_picta_bellii
ENSTSYG00000004979	SND1	96	61.379	ENSCING00000000524	-	71	61.379	Ciona_intestinalis
ENSTSYG00000004979	SND1	96	63.002	ENSCSAVG00000008807	-	71	63.002	Ciona_savignyi
ENSTSYG00000004979	SND1	96	99.472	ENSCANG00000035119	SND1	73	99.472	Colobus_angolensis_palliatus
ENSTSYG00000004979	SND1	96	97.711	ENSCGRG00001022514	Snd1	93	97.535	Cricetulus_griseus_chok1gshd
ENSTSYG00000004979	SND1	96	97.711	ENSCGRG00000012277	Snd1	75	97.711	Cricetulus_griseus_crigri
ENSTSYG00000004979	SND1	96	87.544	ENSCSEG00000008661	snd1	72	87.544	Cynoglossus_semilaevis
ENSTSYG00000004979	SND1	96	88.421	ENSCVAG00000010316	snd1	71	88.087	Cyprinodon_variegatus
ENSTSYG00000004979	SND1	97	87.868	ENSDARG00000006766	snd1	95	87.868	Danio_rerio
ENSTSYG00000004979	SND1	96	94.737	ENSDNOG00000006795	SND1	75	94.737	Dasypus_novemcinctus
ENSTSYG00000004979	SND1	96	98.944	ENSDORG00000000336	Snd1	73	98.944	Dipodomys_ordii
ENSTSYG00000004979	SND1	98	52.667	FBgn0035121	Tudor-SN	70	52.667	Drosophila_melanogaster
ENSTSYG00000004979	SND1	96	71.127	ENSETEG00000000375	SND1	72	71.127	Echinops_telfairi
ENSTSYG00000004979	SND1	93	64.541	ENSEBUG00000014201	-	84	75.410	Eptatretus_burgeri
ENSTSYG00000004979	SND1	96	99.120	ENSEASG00005008513	SND1	73	96.404	Equus_asinus_asinus
ENSTSYG00000004979	SND1	96	99.120	ENSECAG00000011451	SND1	72	99.120	Equus_caballus
ENSTSYG00000004979	SND1	97	97.178	ENSEEUG00000014737	SND1	62	97.178	Erinaceus_europaeus
ENSTSYG00000004979	SND1	96	85.140	ENSELUG00000001805	snd1	68	85.140	Esox_lucius
ENSTSYG00000004979	SND1	96	99.472	ENSFCAG00000008289	SND1	75	99.472	Felis_catus
ENSTSYG00000004979	SND1	96	98.944	ENSFDAG00000015881	SND1	73	98.944	Fukomys_damarensis
ENSTSYG00000004979	SND1	96	87.895	ENSFHEG00000004093	snd1	72	87.895	Fundulus_heteroclitus
ENSTSYG00000004979	SND1	56	94.211	ENSGALG00000052684	-	52	91.837	Gallus_gallus
ENSTSYG00000004979	SND1	96	87.895	ENSGAFG00000008421	snd1	72	87.895	Gambusia_affinis
ENSTSYG00000004979	SND1	96	41.278	ENSGACG00000019793	snd1	70	41.278	Gasterosteus_aculeatus
ENSTSYG00000004979	SND1	96	99.472	ENSGGOG00000009614	SND1	75	99.124	Gorilla_gorilla
ENSTSYG00000004979	SND1	96	86.667	ENSHBUG00000019135	snd1	70	86.667	Haplochromis_burtoni
ENSTSYG00000004979	SND1	96	98.415	ENSHGLG00000003618	SND1	93	98.239	Heterocephalus_glaber_female
ENSTSYG00000004979	SND1	96	98.415	ENSHGLG00100012449	SND1	73	98.415	Heterocephalus_glaber_male
ENSTSYG00000004979	SND1	96	87.193	ENSHCOG00000005266	snd1	71	87.193	Hippocampus_comes
ENSTSYG00000004979	SND1	96	87.238	ENSIPUG00000013279	snd1	71	87.238	Ictalurus_punctatus
ENSTSYG00000004979	SND1	96	98.944	ENSSTOG00000002140	SND1	73	98.944	Ictidomys_tridecemlineatus
ENSTSYG00000004979	SND1	96	98.944	ENSJJAG00000009561	Snd1	73	98.944	Jaculus_jaculus
ENSTSYG00000004979	SND1	96	87.719	ENSKMAG00000016997	snd1	70	87.719	Kryptolebias_marmoratus
ENSTSYG00000004979	SND1	96	86.316	ENSLBEG00000013563	snd1	73	86.316	Labrus_bergylta
ENSTSYG00000004979	SND1	96	87.197	ENSLOCG00000015537	snd1	73	87.197	Lepisosteus_oculatus
ENSTSYG00000004979	SND1	96	98.415	ENSLAFG00000009696	SND1	73	98.415	Loxodonta_africana
ENSTSYG00000004979	SND1	96	99.472	ENSMFAG00000038114	SND1	75	99.297	Macaca_fascicularis
ENSTSYG00000004979	SND1	97	99.469	ENSMMUG00000015432	SND1	93	99.469	Macaca_mulatta
ENSTSYG00000004979	SND1	97	99.469	ENSMNEG00000039808	SND1	97	99.469	Macaca_nemestrina
ENSTSYG00000004979	SND1	97	99.469	ENSMLEG00000029040	SND1	97	99.469	Mandrillus_leucophaeus
ENSTSYG00000004979	SND1	96	87.895	ENSMAMG00000011739	snd1	70	87.895	Mastacembelus_armatus
ENSTSYG00000004979	SND1	96	86.667	ENSMZEG00005005681	snd1	71	86.667	Maylandia_zebra
ENSTSYG00000004979	SND1	96	99.120	ENSMICG00000000097	SND1	73	99.120	Microcebus_murinus
ENSTSYG00000004979	SND1	96	98.415	ENSMOCG00000005040	Snd1	73	98.415	Microtus_ochrogaster
ENSTSYG00000004979	SND1	96	87.018	ENSMMOG00000001795	snd1	70	87.018	Mola_mola
ENSTSYG00000004979	SND1	96	95.246	ENSMODG00000015182	SND1	73	95.246	Monodelphis_domestica
ENSTSYG00000004979	SND1	96	86.842	ENSMALG00000012071	snd1	71	86.842	Monopterus_albus
ENSTSYG00000004979	SND1	97	98.060	MGP_CAROLIEiJ_G0028159	Snd1	95	98.060	Mus_caroli
ENSTSYG00000004979	SND1	96	97.711	ENSMUSG00000001424	Snd1	93	97.535	Mus_musculus
ENSTSYG00000004979	SND1	97	98.060	MGP_PahariEiJ_G0021917	Snd1	96	98.060	Mus_pahari
ENSTSYG00000004979	SND1	96	98.063	MGP_SPRETEiJ_G0029159	Snd1	93	97.887	Mus_spretus
ENSTSYG00000004979	SND1	96	99.120	ENSMPUG00000006545	SND1	73	99.120	Mustela_putorius_furo
ENSTSYG00000004979	SND1	96	98.421	ENSMLUG00000017130	SND1	71	98.421	Myotis_lucifugus
ENSTSYG00000004979	SND1	96	98.239	ENSNGAG00000011186	Snd1	73	98.239	Nannospalax_galili
ENSTSYG00000004979	SND1	96	86.667	ENSNBRG00000006681	snd1	70	86.667	Neolamprologus_brichardi
ENSTSYG00000004979	SND1	97	99.471	ENSNLEG00000012263	SND1	96	99.471	Nomascus_leucogenys
ENSTSYG00000004979	SND1	97	87.500	ENSOPRG00000013405	SND1	63	87.500	Ochotona_princeps
ENSTSYG00000004979	SND1	96	99.120	ENSODEG00000011502	SND1	73	99.120	Octodon_degus
ENSTSYG00000004979	SND1	96	86.491	ENSONIG00000011481	snd1	68	86.491	Oreochromis_niloticus
ENSTSYG00000004979	SND1	96	95.431	ENSOANG00000000817	SND1	70	95.431	Ornithorhynchus_anatinus
ENSTSYG00000004979	SND1	96	97.535	ENSOCUG00000001620	SND1	73	97.535	Oryctolagus_cuniculus
ENSTSYG00000004979	SND1	96	87.719	ENSORLG00000015201	snd1	71	87.719	Oryzias_latipes
ENSTSYG00000004979	SND1	96	87.719	ENSORLG00020013991	snd1	71	87.719	Oryzias_latipes_hni
ENSTSYG00000004979	SND1	96	87.719	ENSORLG00015012436	snd1	70	87.719	Oryzias_latipes_hsok
ENSTSYG00000004979	SND1	96	87.193	ENSOMEG00000006406	snd1	70	87.193	Oryzias_melastigma
ENSTSYG00000004979	SND1	96	98.596	ENSOGAG00000013356	SND1	69	98.596	Otolemur_garnettii
ENSTSYG00000004979	SND1	96	98.944	ENSOARG00000002149	SND1	75	98.944	Ovis_aries
ENSTSYG00000004979	SND1	96	99.472	ENSPPAG00000042947	SND1	75	99.124	Pan_paniscus
ENSTSYG00000004979	SND1	96	99.472	ENSPPRG00000004494	SND1	73	99.472	Panthera_pardus
ENSTSYG00000004979	SND1	96	99.472	ENSPTIG00000014214	SND1	73	99.472	Panthera_tigris_altaica
ENSTSYG00000004979	SND1	96	99.472	ENSPTRG00000023911	SND1	75	99.124	Pan_troglodytes
ENSTSYG00000004979	SND1	96	99.472	ENSPANG00000011997	SND1	75	99.472	Papio_anubis
ENSTSYG00000004979	SND1	96	85.269	ENSPKIG00000023494	snd1	71	85.269	Paramormyrops_kingsleyae
ENSTSYG00000004979	SND1	93	86.076	ENSPMGG00000003629	snd1	74	86.076	Periophthalmus_magnuspinnatus
ENSTSYG00000004979	SND1	96	98.415	ENSPEMG00000010240	Snd1	73	98.415	Peromyscus_maniculatus_bairdii
ENSTSYG00000004979	SND1	96	79.510	ENSPMAG00000007915	-	72	79.510	Petromyzon_marinus
ENSTSYG00000004979	SND1	96	95.775	ENSPCIG00000011561	SND1	73	95.775	Phascolarctos_cinereus
ENSTSYG00000004979	SND1	96	87.544	ENSPFOG00000001557	snd1	70	87.544	Poecilia_formosa
ENSTSYG00000004979	SND1	96	87.719	ENSPLAG00000018459	snd1	68	87.719	Poecilia_latipinna
ENSTSYG00000004979	SND1	96	88.070	ENSPMEG00000006803	snd1	70	88.070	Poecilia_mexicana
ENSTSYG00000004979	SND1	96	88.070	ENSPREG00000002189	snd1	71	88.070	Poecilia_reticulata
ENSTSYG00000004979	SND1	96	99.296	ENSPPYG00000017972	SND1	79	99.296	Pongo_abelii
ENSTSYG00000004979	SND1	97	80.106	ENSPCAG00000011305	SND1	73	80.106	Procavia_capensis
ENSTSYG00000004979	SND1	98	98.621	ENSPCOG00000026791	SND1	93	98.621	Propithecus_coquereli
ENSTSYG00000004979	SND1	96	95.951	ENSPVAG00000013945	SND1	73	95.951	Pteropus_vampyrus
ENSTSYG00000004979	SND1	96	86.667	ENSPNYG00000000932	snd1	70	86.667	Pundamilia_nyererei
ENSTSYG00000004979	SND1	96	87.762	ENSPNAG00000001206	snd1	71	87.762	Pygocentrus_nattereri
ENSTSYG00000004979	SND1	96	97.887	ENSRNOG00000031173	Snd1	75	96.831	Rattus_norvegicus
ENSTSYG00000004979	SND1	97	99.250	ENSRBIG00000027782	-	93	99.430	Rhinopithecus_bieti
ENSTSYG00000004979	SND1	96	99.472	ENSRROG00000033020	SND1	73	99.472	Rhinopithecus_roxellana
ENSTSYG00000004979	SND1	98	98.793	ENSSBOG00000032461	SND1	94	98.793	Saimiri_boliviensis_boliviensis
ENSTSYG00000004979	SND1	96	91.373	ENSSHAG00000015359	SND1	75	91.373	Sarcophilus_harrisii
ENSTSYG00000004979	SND1	96	86.308	ENSSFOG00015001103	snd1	72	86.308	Scleropages_formosus
ENSTSYG00000004979	SND1	96	86.316	ENSSMAG00000001932	snd1	66	86.316	Scophthalmus_maximus
ENSTSYG00000004979	SND1	96	87.368	ENSSDUG00000002699	snd1	65	87.368	Seriola_dumerili
ENSTSYG00000004979	SND1	97	75.965	ENSSLDG00000001950	snd1	68	75.965	Seriola_lalandi_dorsalis
ENSTSYG00000004979	SND1	96	91.373	ENSSARG00000004877	SND1	78	91.373	Sorex_araneus
ENSTSYG00000004979	SND1	98	86.542	ENSSPUG00000017586	SND1	97	86.542	Sphenodon_punctatus
ENSTSYG00000004979	SND1	97	86.726	ENSSPAG00000021398	snd1	95	86.726	Stegastes_partitus
ENSTSYG00000004979	SND1	96	98.592	ENSSSCG00000016590	SND1	70	98.592	Sus_scrofa
ENSTSYG00000004979	SND1	97	87.500	ENSTRUG00000014067	snd1	71	87.500	Takifugu_rubripes
ENSTSYG00000004979	SND1	96	87.368	ENSTNIG00000011019	snd1	94	87.238	Tetraodon_nigroviridis
ENSTSYG00000004979	SND1	96	90.493	ENSTBEG00000003999	SND1	67	90.493	Tupaia_belangeri
ENSTSYG00000004979	SND1	96	92.077	ENSTTRG00000006059	SND1	73	92.077	Tursiops_truncatus
ENSTSYG00000004979	SND1	89	88.920	ENSUAMG00000002820	-	83	88.920	Ursus_americanus
ENSTSYG00000004979	SND1	86	99.048	ENSUAMG00000005604	-	54	99.048	Ursus_americanus
ENSTSYG00000004979	SND1	96	99.296	ENSUMAG00000005960	SND1	73	99.296	Ursus_maritimus
ENSTSYG00000004979	SND1	96	87.478	ENSVPAG00000008302	SND1	63	87.478	Vicugna_pacos
ENSTSYG00000004979	SND1	96	98.944	ENSVVUG00000007226	SND1	73	98.944	Vulpes_vulpes
ENSTSYG00000004979	SND1	96	91.197	ENSXETG00000023043	snd1	76	91.197	Xenopus_tropicalis
ENSTSYG00000004979	SND1	93	87.523	ENSXCOG00000013629	snd1	74	87.523	Xiphophorus_couchianus
ENSTSYG00000004979	SND1	96	87.895	ENSXMAG00000011469	snd1	70	87.895	Xiphophorus_maculatus