EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTSYG00000005204 (Gene tree)
Gene ID
103273174
Gene Symbol
-
Alias
-
Full Name
LSM3 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type
protein_coding
Species
Carlito_syrichta
Status
putative
Strand
Plus strand
Length
22339 bases
Position
chrKE948361.1:491317-513655
Accession
103273174
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTSYP00000004757LSMPF01423.225e-2011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTSYT00000005201-573XM_008070604ENSTSYP00000004757102 (aa)XP_008068795A0A1U7UF87
Gene Model
Click here to download ENSTSYG00000005204's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000005204's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTSYG00000005204-7731.707ENSTSYG00000011207-6931.707
ENSTSYG00000005204-7434.667ENSTSYG00000006449-8234.667
ENSTSYG00000005204-9981.188ENSTSYG00000028528-9981.188
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTSYG00000005204-10099.020ENSG00000170860LSM310099.020Homo_sapiens
ENSTSYG00000005204-10096.078ENSAPOG00000018947lsm310096.078Acanthochromis_polyacanthus
ENSTSYG00000005204-10099.020ENSAMEG00000009405LSM310099.020Ailuropoda_melanoleuca
ENSTSYG00000005204-10095.098ENSACIG00000004574lsm37195.098Amphilophus_citrinellus
ENSTSYG00000005204-10096.078ENSAOCG00000007658lsm310096.078Amphiprion_ocellaris
ENSTSYG00000005204-10096.078ENSAPEG00000018621lsm310096.078Amphiprion_percula
ENSTSYG00000005204-10096.078ENSATEG00000005153lsm310096.078Anabas_testudineus
ENSTSYG00000005204-93100.000ENSAPLG00000014499LSM3100100.000Anas_platyrhynchos
ENSTSYG00000005204-10098.039ENSACAG00000013503LSM310098.039Anolis_carolinensis
ENSTSYG00000005204-10095.098ENSANAG00000002903-10095.098Aotus_nancymaae
ENSTSYG00000005204-10099.020ENSANAG00000034627LSM310099.020Aotus_nancymaae
ENSTSYG00000005204-9596.907ENSACLG00000001726-9496.907Astatotilapia_calliptera
ENSTSYG00000005204-10098.039ENSAMXG00000041214lsm310098.039Astyanax_mexicanus
ENSTSYG00000005204-94100.000ENSBTAG00000007363LSM3100100.000Bos_taurus
ENSTSYG00000005204-10069.608WBGene00003077lsm-310069.608Caenorhabditis_elegans
ENSTSYG00000005204-10097.059ENSCAFG00000001760LSM310097.059Canis_familiaris
ENSTSYG00000005204-10096.078ENSCAFG00020026452-10096.078Canis_lupus_dingo
ENSTSYG00000005204-10097.059ENSCAFG00020021584-10097.059Canis_lupus_dingo
ENSTSYG00000005204-10087.850ENSCAFG00020020950-10087.850Canis_lupus_dingo
ENSTSYG00000005204-10097.059ENSCAFG00020017266-10097.059Canis_lupus_dingo
ENSTSYG00000005204-10090.196ENSCAFG00020016680-10090.196Canis_lupus_dingo
ENSTSYG00000005204-10099.020ENSCHIG00000024650LSM310099.020Capra_hircus
ENSTSYG00000005204-94100.000ENSCAPG00000015760LSM3100100.000Cavia_aperea
ENSTSYG00000005204-10099.020ENSCPOG00000034071LSM310099.020Cavia_porcellus
ENSTSYG00000005204-10099.020ENSCCAG00000019503-10099.020Cebus_capucinus
ENSTSYG00000005204-10099.020ENSCCAG00000036499-10099.020Cebus_capucinus
ENSTSYG00000005204-10079.412ENSCCAG00000032763-10079.412Cebus_capucinus
ENSTSYG00000005204-10099.020ENSCATG00000039421LSM310099.020Cercocebus_atys
ENSTSYG00000005204-9978.218ENSCATG00000031630-9978.218Cercocebus_atys
ENSTSYG00000005204-10099.020ENSCLAG00000015997LSM310099.020Chinchilla_lanigera
ENSTSYG00000005204-10094.118ENSCSAG00000019525-10094.118Chlorocebus_sabaeus
ENSTSYG00000005204-10098.039ENSCPBG00000014531LSM310098.039Chrysemys_picta_bellii
ENSTSYG00000005204-10080.769ENSCSAVG00000009542-10080.769Ciona_savignyi
ENSTSYG00000005204-10096.078ENSCANG00000038037-10096.078Colobus_angolensis_palliatus
ENSTSYG00000005204-10099.020ENSCANG00000033944-10099.020Colobus_angolensis_palliatus
ENSTSYG00000005204-10094.118ENSCANG00000018782-10094.118Colobus_angolensis_palliatus
ENSTSYG00000005204-10074.757ENSCGRG00001008639-10074.757Cricetulus_griseus_chok1gshd
ENSTSYG00000005204-10099.020ENSCGRG00001017598Lsm310099.020Cricetulus_griseus_chok1gshd
ENSTSYG00000005204-9883.000ENSCGRG00001011396-10083.000Cricetulus_griseus_chok1gshd
ENSTSYG00000005204-9384.211ENSCGRG00000012129-10084.211Cricetulus_griseus_crigri
ENSTSYG00000005204-10099.020ENSCGRG00000016159Lsm310099.020Cricetulus_griseus_crigri
ENSTSYG00000005204-10096.078ENSCSEG00000015071lsm37796.078Cynoglossus_semilaevis
ENSTSYG00000005204-10095.098ENSCVAG00000006933lsm310095.098Cyprinodon_variegatus
ENSTSYG00000005204-10098.039ENSDARG00000089663lsm310098.039Danio_rerio
ENSTSYG00000005204-10099.020ENSDNOG00000030808LSM310099.020Dasypus_novemcinctus
ENSTSYG00000005204-10079.412ENSDORG00000024490-10079.412Dipodomys_ordii
ENSTSYG00000005204-10099.020ENSDORG00000006894-10099.020Dipodomys_ordii
ENSTSYG00000005204-10077.670FBgn0051184LSm310077.670Drosophila_melanogaster
ENSTSYG00000005204-10099.020ENSETEG00000016207LSM310099.020Echinops_telfairi
ENSTSYG00000005204-10089.216ENSEBUG00000004943lsm310089.216Eptatretus_burgeri
ENSTSYG00000005204-10099.020ENSEASG00005015443LSM310099.020Equus_asinus_asinus
ENSTSYG00000005204-10099.020ENSECAG00000007803LSM310099.020Equus_caballus
ENSTSYG00000005204-10097.059ENSELUG00000018922lsm310097.059Esox_lucius
ENSTSYG00000005204-10099.020ENSFCAG00000038453LSM310099.020Felis_catus
ENSTSYG00000005204-10074.510ENSFCAG00000044344-10074.510Felis_catus
ENSTSYG00000005204-10098.039ENSFALG00000012644LSM310098.039Ficedula_albicollis
ENSTSYG00000005204-10099.020ENSFDAG00000011470LSM310099.020Fukomys_damarensis
ENSTSYG00000005204-10096.078ENSFHEG00000000876lsm310096.078Fundulus_heteroclitus
ENSTSYG00000005204-9396.842ENSGMOG00000011024lsm310096.842Gadus_morhua
ENSTSYG00000005204-10096.078ENSGAFG00000013965lsm310096.078Gambusia_affinis
ENSTSYG00000005204-10096.078ENSGACG00000003488lsm310096.078Gasterosteus_aculeatus
ENSTSYG00000005204-10098.039ENSGAGG00000025707LSM310098.039Gopherus_agassizii
ENSTSYG00000005204-10099.020ENSGGOG00000010006LSM310099.020Gorilla_gorilla
ENSTSYG00000005204-10096.078ENSHBUG00000022399lsm310096.078Haplochromis_burtoni
ENSTSYG00000005204-10099.020ENSHGLG00000000651LSM310099.020Heterocephalus_glaber_female
ENSTSYG00000005204-10079.412ENSHGLG00000015564-10079.412Heterocephalus_glaber_female
ENSTSYG00000005204-10099.020ENSHGLG00100011343LSM310099.020Heterocephalus_glaber_male
ENSTSYG00000005204-10079.412ENSHGLG00100010658-10079.412Heterocephalus_glaber_male
ENSTSYG00000005204-10095.098ENSHCOG00000013481lsm310095.098Hippocampus_comes
ENSTSYG00000005204-10098.039ENSIPUG00000009207lsm310098.039Ictalurus_punctatus
ENSTSYG00000005204-10099.020ENSSTOG00000006842LSM310099.020Ictidomys_tridecemlineatus
ENSTSYG00000005204-10090.196ENSJJAG00000012797-10090.196Jaculus_jaculus
ENSTSYG00000005204-9975.490ENSJJAG00000018311-10075.490Jaculus_jaculus
ENSTSYG00000005204-10099.020ENSJJAG00000017351Lsm310099.020Jaculus_jaculus
ENSTSYG00000005204-10095.098ENSKMAG00000015182lsm310095.098Kryptolebias_marmoratus
ENSTSYG00000005204-9694.898ENSLBEG00000021292lsm310094.898Labrus_bergylta
ENSTSYG00000005204-10096.078ENSLOCG00000013560lsm310096.078Lepisosteus_oculatus
ENSTSYG00000005204-10098.058ENSLAFG00000023308LSM310098.058Loxodonta_africana
ENSTSYG00000005204-10099.020ENSMFAG00000003185LSM310099.020Macaca_fascicularis
ENSTSYG00000005204-9578.351ENSMMUG00000002294-9478.351Macaca_mulatta
ENSTSYG00000005204-10076.471ENSMMUG00000043596-10076.471Macaca_mulatta
ENSTSYG00000005204-10099.020ENSMMUG00000023126LSM310099.020Macaca_mulatta
ENSTSYG00000005204-10099.020ENSMNEG00000043632LSM310099.020Macaca_nemestrina
ENSTSYG00000005204-9980.198ENSMNEG00000037686-9980.198Macaca_nemestrina
ENSTSYG00000005204-10099.020ENSMLEG00000036162LSM310099.020Mandrillus_leucophaeus
ENSTSYG00000005204-10096.078ENSMAMG00000012807lsm310096.078Mastacembelus_armatus
ENSTSYG00000005204-10096.078ENSMZEG00005016682lsm37396.078Maylandia_zebra
ENSTSYG00000005204-94100.000ENSMGAG00000007776LSM3100100.000Meleagris_gallopavo
ENSTSYG00000005204-10098.039ENSMICG00000032361-10098.039Microcebus_murinus
ENSTSYG00000005204-10084.314ENSMICG00000027821-10084.314Microcebus_murinus
ENSTSYG00000005204-10099.020ENSMOCG00000014269Lsm310099.020Microtus_ochrogaster
ENSTSYG00000005204-10095.098ENSMMOG00000020715lsm310095.098Mola_mola
ENSTSYG00000005204-10098.039ENSMODG00000007275LSM310098.039Monodelphis_domestica
ENSTSYG00000005204-10096.078ENSMALG00000006485lsm310096.078Monopterus_albus
ENSTSYG00000005204-10099.020ENSMUSG00000034192Lsm310099.020Mus_musculus
ENSTSYG00000005204-10099.020MGP_PahariEiJ_G0022402Lsm310099.020Mus_pahari
ENSTSYG00000005204-10099.020MGP_SPRETEiJ_G0029681Lsm310099.020Mus_spretus
ENSTSYG00000005204-8391.765ENSMPUG00000017256-10091.765Mustela_putorius_furo
ENSTSYG00000005204-9787.879ENSMPUG00000019120-9787.879Mustela_putorius_furo
ENSTSYG00000005204-10099.020ENSMLUG00000010677LSM310099.020Myotis_lucifugus
ENSTSYG00000005204-10093.137ENSMLUG00000024700-10093.137Myotis_lucifugus
ENSTSYG00000005204-9980.198ENSNGAG00000010207-9980.198Nannospalax_galili
ENSTSYG00000005204-10073.529ENSNGAG00000013716-10073.529Nannospalax_galili
ENSTSYG00000005204-10099.020ENSNGAG00000022450Lsm310099.020Nannospalax_galili
ENSTSYG00000005204-10096.078ENSNBRG00000014318lsm310096.078Neolamprologus_brichardi
ENSTSYG00000005204-10090.196ENSNLEG00000030229-10090.196Nomascus_leucogenys
ENSTSYG00000005204-10099.020ENSNLEG00000005079LSM310099.020Nomascus_leucogenys
ENSTSYG00000005204-10091.176ENSODEG00000019403-10091.176Octodon_degus
ENSTSYG00000005204-10099.020ENSODEG00000001726LSM310099.020Octodon_degus
ENSTSYG00000005204-10098.039ENSODEG00000019740-10098.039Octodon_degus
ENSTSYG00000005204-10097.059ENSODEG00000019158-10097.059Octodon_degus
ENSTSYG00000005204-10096.078ENSONIG00000021369-10096.078Oreochromis_niloticus
ENSTSYG00000005204-10096.078ENSONIG00000000370lsm310096.078Oreochromis_niloticus
ENSTSYG00000005204-10098.039ENSOANG00000012273LSM310098.039Ornithorhynchus_anatinus
ENSTSYG00000005204-10094.118ENSOCUG00000011088-10094.118Oryctolagus_cuniculus
ENSTSYG00000005204-10099.020ENSOCUG00000027653-10099.020Oryctolagus_cuniculus
ENSTSYG00000005204-10094.118ENSORLG00000025900lsm310094.118Oryzias_latipes
ENSTSYG00000005204-10094.118ENSORLG00020007125lsm310094.118Oryzias_latipes_hni
ENSTSYG00000005204-10094.118ENSORLG00015002944lsm310094.118Oryzias_latipes_hsok
ENSTSYG00000005204-10094.118ENSOMEG00000001915lsm310094.118Oryzias_melastigma
ENSTSYG00000005204-10089.216ENSOGAG00000033051-10089.216Otolemur_garnettii
ENSTSYG00000005204-9696.939ENSOGAG00000028858-10096.939Otolemur_garnettii
ENSTSYG00000005204-10099.020ENSOGAG00000007659-10099.020Otolemur_garnettii
ENSTSYG00000005204-10098.058ENSOARG00000000600LSM310098.058Ovis_aries
ENSTSYG00000005204-10099.020ENSPPAG00000034074LSM310099.020Pan_paniscus
ENSTSYG00000005204-9991.089ENSPPRG00000010610-8991.089Panthera_pardus
ENSTSYG00000005204-10098.039ENSPPRG00000020953-10098.039Panthera_pardus
ENSTSYG00000005204-10099.020ENSPPRG00000012912-10099.020Panthera_pardus
ENSTSYG00000005204-10099.020ENSPTIG00000003463-10099.020Panthera_tigris_altaica
ENSTSYG00000005204-10099.020ENSPTIG00000013072-10099.020Panthera_tigris_altaica
ENSTSYG00000005204-10099.020ENSPTRG00000014650LSM310099.020Pan_troglodytes
ENSTSYG00000005204-10099.020ENSPANG00000009378LSM310099.020Papio_anubis
ENSTSYG00000005204-10077.451ENSPANG00000032192-10077.451Papio_anubis
ENSTSYG00000005204-10099.020ENSPKIG00000008037lsm39199.020Paramormyrops_kingsleyae
ENSTSYG00000005204-10098.039ENSPSIG00000015720LSM310098.039Pelodiscus_sinensis
ENSTSYG00000005204-9592.784ENSPMGG00000012103lsm39892.784Periophthalmus_magnuspinnatus
ENSTSYG00000005204-10099.020ENSPEMG00000015797Lsm310099.020Peromyscus_maniculatus_bairdii
ENSTSYG00000005204-10082.353ENSPEMG00000020213-10082.353Peromyscus_maniculatus_bairdii
ENSTSYG00000005204-10096.078ENSPFOG00000008372lsm310096.078Poecilia_formosa
ENSTSYG00000005204-10096.078ENSPLAG00000000563lsm310096.078Poecilia_latipinna
ENSTSYG00000005204-10096.078ENSPMEG00000022052lsm310096.078Poecilia_mexicana
ENSTSYG00000005204-10096.078ENSPREG00000022485lsm310096.078Poecilia_reticulata
ENSTSYG00000005204-10099.020ENSPPYG00000013402LSM310099.020Pongo_abelii
ENSTSYG00000005204-10099.020ENSPCAG00000017077LSM310099.020Procavia_capensis
ENSTSYG00000005204-9476.042ENSPCOG00000014435-9876.042Propithecus_coquereli
ENSTSYG00000005204-10098.039ENSPCOG00000016217-10098.039Propithecus_coquereli
ENSTSYG00000005204-10099.020ENSPVAG00000016795LSM310099.020Pteropus_vampyrus
ENSTSYG00000005204-10096.078ENSPNYG00000009552lsm37396.078Pundamilia_nyererei
ENSTSYG00000005204-10098.039ENSPNAG00000023467lsm310098.039Pygocentrus_nattereri
ENSTSYG00000005204-10099.020ENSRNOG00000008733Lsm310099.020Rattus_norvegicus
ENSTSYG00000005204-10099.020ENSRBIG00000034399LSM310099.020Rhinopithecus_bieti
ENSTSYG00000005204-10082.353ENSRBIG00000043783-10082.353Rhinopithecus_bieti
ENSTSYG00000005204-10080.392ENSRROG00000044056-10080.392Rhinopithecus_roxellana
ENSTSYG00000005204-10099.020ENSRROG00000033276-10099.020Rhinopithecus_roxellana
ENSTSYG00000005204-10088.235ENSRROG00000044047-10088.235Rhinopithecus_roxellana
ENSTSYG00000005204-10083.333ENSRROG00000039868-10083.333Rhinopithecus_roxellana
ENSTSYG00000005204-10099.020ENSSBOG00000024310LSM310099.020Saimiri_boliviensis_boliviensis
ENSTSYG00000005204-10098.039ENSSFOG00015007071lsm310098.039Scleropages_formosus
ENSTSYG00000005204-10096.078ENSSMAG00000001818lsm310096.078Scophthalmus_maximus
ENSTSYG00000005204-10096.078ENSSDUG00000006040lsm310096.078Seriola_dumerili
ENSTSYG00000005204-10096.078ENSSLDG00000006399lsm310096.078Seriola_lalandi_dorsalis
ENSTSYG00000005204-57100.000ENSSARG00000005275-100100.000Sorex_araneus
ENSTSYG00000005204-93100.000ENSSPUG00000017047-99100.000Sphenodon_punctatus
ENSTSYG00000005204-10088.235ENSSPUG00000005394LSM310088.235Sphenodon_punctatus
ENSTSYG00000005204-10085.294ENSSPAG00000000934lsm310085.294Stegastes_partitus
ENSTSYG00000005204-9576.289ENSSSCG00000023718-9976.289Sus_scrofa
ENSTSYG00000005204-10099.020ENSSSCG00000011601LSM310099.020Sus_scrofa
ENSTSYG00000005204-10098.039ENSTGUG00000008327LSM310098.039Taeniopygia_guttata
ENSTSYG00000005204-10095.098ENSTRUG00000023175lsm310095.098Takifugu_rubripes
ENSTSYG00000005204-10095.098ENSTNIG00000005589lsm310095.098Tetraodon_nigroviridis
ENSTSYG00000005204-10089.216ENSTBEG00000001050-9989.216Tupaia_belangeri
ENSTSYG00000005204-10099.020ENSTTRG00000011197LSM310099.020Tursiops_truncatus
ENSTSYG00000005204-10099.020ENSUAMG00000017250-10099.020Ursus_americanus
ENSTSYG00000005204-10099.020ENSUMAG00000015905LSM310099.020Ursus_maritimus
ENSTSYG00000005204-93100.000ENSVPAG00000010709LSM3100100.000Vicugna_pacos
ENSTSYG00000005204-10090.196ENSVVUG00000024228-10090.196Vulpes_vulpes
ENSTSYG00000005204-10095.098ENSVVUG00000007332-9195.098Vulpes_vulpes
ENSTSYG00000005204-10094.118ENSVVUG00000006481-10094.118Vulpes_vulpes
ENSTSYG00000005204-10094.118ENSVVUG00000029294-10094.118Vulpes_vulpes
ENSTSYG00000005204-10093.137ENSVVUG00000005684-10093.137Vulpes_vulpes
ENSTSYG00000005204-10099.020ENSXETG00000011534lsm310099.020Xenopus_tropicalis
ENSTSYG00000005204-10096.078ENSXCOG00000017432LSM310096.078Xiphophorus_couchianus
ENSTSYG00000005204-10096.078ENSXMAG00000009151lsm310096.078Xiphophorus_maculatus

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