EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000005334 (Gene tree)
Gene ID: 103273701
Gene Symbol: RBFOX1
Alias: A2BP1|FOX-1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Plus strand
Length: 198714 bases
Position: chrKE948630.1:39123-237836
Accession: 103273701
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000034254	Fox-1_C	PF12414.8	7.6e-43	1	1
ENSTSYP00000017271	Fox-1_C	PF12414.8	1.1e-42	1	1
ENSTSYP00000004885	Fox-1_C	PF12414.8	1.2e-40	1	1
ENSTSYP00000025386	Fox-1_C	PF12414.8	1.6e-40	1	1
ENSTSYP00000027727	Fox-1_C	PF12414.8	2.3e-40	1	1
ENSTSYP00000027520	Fox-1_C	PF12414.8	4e-40	1	1
ENSTSYP00000017129	Fox-1_C	PF12414.8	5.3e-23	1	1
ENSTSYP00000004885	RRM_1	PF00076.22	2.9e-18	1	1
ENSTSYP00000034254	RRM_1	PF00076.22	3e-18	1	1
ENSTSYP00000017129	RRM_1	PF00076.22	3.1e-18	1	1
ENSTSYP00000017271	RRM_1	PF00076.22	3.2e-18	1	1
ENSTSYP00000027727	RRM_1	PF00076.22	3.7e-18	1	1
ENSTSYP00000027520	RRM_1	PF00076.22	4.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000046699	RBFOX1-206	1245	XM_008071141	ENSTSYP00000027727	414 (aa)	-	UPI000C2F65B7
ENSTSYT00000044417	RBFOX1-205	1041	XM_008071143	ENSTSYP00000027520	346 (aa)	-	UPI000C2F3F8A
ENSTSYT00000048848	RBFOX1-204	1086	XM_008071140	ENSTSYP00000034254	361 (aa)	-	UPI000C2F6834
ENSTSYT00000036173	RBFOX1-202	4964	XM_008071142	ENSTSYP00000017271	373 (aa)	-	UPI000C2F7C7B
ENSTSYT00000030758	RBFOX1-207	1008	-	ENSTSYP00000025386	335 (aa)	-	UPI000C2F5D6A
ENSTSYT00000046177	RBFOX1-201	1140	-	ENSTSYP00000017129	379 (aa)	-	UPI000C2F412C
ENSTSYT00000005332	RBFOX1-203	1170	-	ENSTSYP00000004885	389 (aa)	-	UPI000C2F6FB9

Gene Model

Click here to download ENSTSYG00000005334's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000005334's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000005334	RBFOX1	100	62.654	ENSTSYG00000014123	RBFOX2	94	66.027
ENSTSYG00000005334	RBFOX1	87	62.198	ENSTSYG00000029617	RBFOX3	100	67.313

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000005334	RBFOX1	100	99.229	ENSG00000078328	RBFOX1	98	99.169	Homo_sapiens
ENSTSYG00000005334	RBFOX1	100	81.530	ENSAPOG00000003197	rbfox1	98	82.058	Acanthochromis_polyacanthus
ENSTSYG00000005334	RBFOX1	60	96.296	ENSAMEG00000008605	RBFOX1	88	95.023	Ailuropoda_melanoleuca
ENSTSYG00000005334	RBFOX1	66	71.375	ENSACIG00000005478	rbfox1	68	71.375	Amphilophus_citrinellus
ENSTSYG00000005334	RBFOX1	72	78.495	ENSAOCG00000008283	rbfox1	96	78.136	Amphiprion_ocellaris
ENSTSYG00000005334	RBFOX1	95	74.792	ENSAPEG00000010636	rbfox1	100	74.931	Amphiprion_percula
ENSTSYG00000005334	RBFOX1	72	76.868	ENSATEG00000007513	rbfox1	96	76.512	Anabas_testudineus
ENSTSYG00000005334	RBFOX1	100	92.545	ENSAPLG00000013263	RBFOX1	97	92.545	Anas_platyrhynchos
ENSTSYG00000005334	RBFOX1	100	85.969	ENSACAG00000004013	RBFOX1	98	85.969	Anolis_carolinensis
ENSTSYG00000005334	RBFOX1	100	99.422	ENSANAG00000029527	RBFOX1	99	97.878	Aotus_nancymaae
ENSTSYG00000005334	RBFOX1	60	88.426	ENSAMXG00000002431	rbfox1	63	88.426	Astyanax_mexicanus
ENSTSYG00000005334	RBFOX1	100	98.201	ENSBTAG00000007210	RBFOX1	97	98.630	Bos_taurus
ENSTSYG00000005334	RBFOX1	100	99.133	ENSCJAG00000017351	RBFOX1	98	97.090	Callithrix_jacchus
ENSTSYG00000005334	RBFOX1	100	98.458	ENSCAFG00000019082	RBFOX1	93	98.458	Canis_familiaris
ENSTSYG00000005334	RBFOX1	100	78.082	ENSCAFG00020024881	RBFOX1	92	83.060	Canis_lupus_dingo
ENSTSYG00000005334	RBFOX1	100	98.201	ENSCHIG00000023549	RBFOX1	97	98.630	Capra_hircus
ENSTSYG00000005334	RBFOX1	100	97.943	ENSCAPG00000017669	RBFOX1	100	95.887	Cavia_aperea
ENSTSYG00000005334	RBFOX1	100	97.943	ENSCPOG00000011314	RBFOX1	99	95.887	Cavia_porcellus
ENSTSYG00000005334	RBFOX1	100	99.422	ENSCCAG00000023031	RBFOX1	97	99.275	Cebus_capucinus
ENSTSYG00000005334	RBFOX1	100	99.229	ENSCATG00000033816	RBFOX1	96	99.169	Cercocebus_atys
ENSTSYG00000005334	RBFOX1	100	98.458	ENSCLAG00000012761	RBFOX1	97	98.630	Chinchilla_lanigera
ENSTSYG00000005334	RBFOX1	100	93.973	ENSCSAG00000008739	RBFOX1	97	99.178	Chlorocebus_sabaeus
ENSTSYG00000005334	RBFOX1	81	96.923	ENSCHOG00000012843	RBFOX1	74	96.923	Choloepus_hoffmanni
ENSTSYG00000005334	RBFOX1	100	95.291	ENSCPBG00000026626	RBFOX1	97	94.795	Chrysemys_picta_bellii
ENSTSYG00000005334	RBFOX1	100	99.229	ENSCANG00000033125	RBFOX1	96	99.169	Colobus_angolensis_palliatus
ENSTSYG00000005334	RBFOX1	100	97.429	ENSCGRG00001013729	Rbfox1	98	95.373	Cricetulus_griseus_chok1gshd
ENSTSYG00000005334	RBFOX1	100	97.429	ENSCGRG00000003272	Rbfox1	98	95.373	Cricetulus_griseus_crigri
ENSTSYG00000005334	RBFOX1	97	76.486	ENSCSEG00000008840	rbfox1	100	76.486	Cynoglossus_semilaevis
ENSTSYG00000005334	RBFOX1	100	88.122	ENSDARG00000014746	rbfox1	100	86.829	Danio_rerio
ENSTSYG00000005334	RBFOX1	100	96.144	ENSDNOG00000043612	RBFOX1	93	96.144	Dasypus_novemcinctus
ENSTSYG00000005334	RBFOX1	100	95.213	ENSDORG00000010024	Rbfox1	97	95.213	Dipodomys_ordii
ENSTSYG00000005334	RBFOX1	100	77.121	ENSETEG00000003771	RBFOX1	93	77.121	Echinops_telfairi
ENSTSYG00000005334	RBFOX1	100	98.972	ENSEASG00005011599	RBFOX1	97	98.972	Equus_asinus_asinus
ENSTSYG00000005334	RBFOX1	100	98.715	ENSECAG00000012667	RBFOX1	97	98.904	Equus_caballus
ENSTSYG00000005334	RBFOX1	100	55.923	ENSELUG00000013096	rbfox1	97	55.096	Esox_lucius
ENSTSYG00000005334	RBFOX1	100	98.555	ENSFCAG00000025322	RBFOX1	97	98.630	Felis_catus
ENSTSYG00000005334	RBFOX1	86	94.720	ENSFALG00000004027	RBFOX1	97	94.720	Ficedula_albicollis
ENSTSYG00000005334	RBFOX1	100	98.458	ENSFDAG00000007388	RBFOX1	98	96.401	Fukomys_damarensis
ENSTSYG00000005334	RBFOX1	100	93.830	ENSGALG00000034325	RBFOX1	96	94.795	Gallus_gallus
ENSTSYG00000005334	RBFOX1	100	93.830	ENSGAGG00000023681	RBFOX1	100	92.593	Gopherus_agassizii
ENSTSYG00000005334	RBFOX1	100	99.229	ENSGGOG00000016871	-	99	97.878	Gorilla_gorilla
ENSTSYG00000005334	RBFOX1	100	98.201	ENSHGLG00000016944	RBFOX1	97	98.356	Heterocephalus_glaber_female
ENSTSYG00000005334	RBFOX1	100	98.201	ENSHGLG00100003272	RBFOX1	97	98.356	Heterocephalus_glaber_male
ENSTSYG00000005334	RBFOX1	86	76.875	ENSHCOG00000016419	rbfox1	91	76.875	Hippocampus_comes
ENSTSYG00000005334	RBFOX1	97	90.000	ENSIPUG00000015215	rbfox1	100	90.000	Ictalurus_punctatus
ENSTSYG00000005334	RBFOX1	100	97.686	ENSSTOG00000000322	RBFOX1	97	97.808	Ictidomys_tridecemlineatus
ENSTSYG00000005334	RBFOX1	100	94.602	ENSJJAG00000002575	Rbfox1	98	92.545	Jaculus_jaculus
ENSTSYG00000005334	RBFOX1	97	78.747	ENSLBEG00000014659	rbfox1	97	78.747	Labrus_bergylta
ENSTSYG00000005334	RBFOX1	100	86.189	ENSLOCG00000006675	rbfox1	98	86.189	Lepisosteus_oculatus
ENSTSYG00000005334	RBFOX1	79	99.351	ENSLAFG00000011480	RBFOX1	100	99.351	Loxodonta_africana
ENSTSYG00000005334	RBFOX1	100	99.486	ENSMFAG00000036447	RBFOX1	98	97.638	Macaca_fascicularis
ENSTSYG00000005334	RBFOX1	100	99.486	ENSMMUG00000003458	RBFOX1	99	99.180	Macaca_mulatta
ENSTSYG00000005334	RBFOX1	100	99.486	ENSMNEG00000032034	RBFOX1	97	99.275	Macaca_nemestrina
ENSTSYG00000005334	RBFOX1	100	99.229	ENSMLEG00000015382	RBFOX1	96	99.169	Mandrillus_leucophaeus
ENSTSYG00000005334	RBFOX1	97	80.822	ENSMAMG00000003142	rbfox1	100	81.370	Mastacembelus_armatus
ENSTSYG00000005334	RBFOX1	75	89.286	ENSMGAG00000008606	RBFOX1	95	89.091	Meleagris_gallopavo
ENSTSYG00000005334	RBFOX1	99	57.937	ENSMAUG00000020570	Rbfox1	99	57.407	Mesocricetus_auratus
ENSTSYG00000005334	RBFOX1	100	98.928	ENSMICG00000034286	RBFOX1	96	98.892	Microcebus_murinus
ENSTSYG00000005334	RBFOX1	100	97.429	ENSMOCG00000020932	Rbfox1	100	95.325	Microtus_ochrogaster
ENSTSYG00000005334	RBFOX1	88	77.358	ENSMMOG00000009716	rbfox1	86	78.205	Mola_mola
ENSTSYG00000005334	RBFOX1	97	91.808	ENSMODG00000005826	RBFOX1	100	97.175	Monodelphis_domestica
ENSTSYG00000005334	RBFOX1	100	82.038	ENSMALG00000003337	rbfox1	98	82.038	Monopterus_albus
ENSTSYG00000005334	RBFOX1	100	97.686	MGP_CAROLIEiJ_G0020427	Rbfox1	97	96.860	Mus_caroli
ENSTSYG00000005334	RBFOX1	100	97.429	ENSMUSG00000008658	Rbfox1	100	99.248	Mus_musculus
ENSTSYG00000005334	RBFOX1	100	97.686	MGP_PahariEiJ_G0016135	Rbfox1	98	95.630	Mus_pahari
ENSTSYG00000005334	RBFOX1	100	97.172	MGP_SPRETEiJ_G0021321	Rbfox1	97	96.377	Mus_spretus
ENSTSYG00000005334	RBFOX1	100	93.151	ENSMPUG00000014822	RBFOX1	93	98.356	Mustela_putorius_furo
ENSTSYG00000005334	RBFOX1	79	97.078	ENSMLUG00000015896	RBFOX1	100	97.078	Myotis_lucifugus
ENSTSYG00000005334	RBFOX1	100	97.943	ENSNGAG00000023276	Rbfox1	100	95.887	Nannospalax_galili
ENSTSYG00000005334	RBFOX1	99	62.907	ENSNBRG00000011084	rbfox1	94	62.750	Neolamprologus_brichardi
ENSTSYG00000005334	RBFOX1	100	98.972	ENSNLEG00000010017	-	96	98.892	Nomascus_leucogenys
ENSTSYG00000005334	RBFOX1	100	79.949	ENSMEUG00000012525	RBFOX1	93	79.949	Notamacropus_eugenii
ENSTSYG00000005334	RBFOX1	88	97.222	ENSOPRG00000006199	-	76	97.222	Ochotona_princeps
ENSTSYG00000005334	RBFOX1	100	98.458	ENSODEG00000013166	RBFOX1	98	96.401	Octodon_degus
ENSTSYG00000005334	RBFOX1	100	90.959	ENSOANG00000002379	RBFOX1	97	96.164	Ornithorhynchus_anatinus
ENSTSYG00000005334	RBFOX1	60	97.685	ENSOCUG00000001205	-	96	97.685	Oryctolagus_cuniculus
ENSTSYG00000005334	RBFOX1	100	97.172	ENSOGAG00000025535	RBFOX1	98	97.172	Otolemur_garnettii
ENSTSYG00000005334	RBFOX1	65	93.750	ENSOARG00000005135	RBFOX1	96	93.750	Ovis_aries
ENSTSYG00000005334	RBFOX1	100	99.169	ENSPPAG00000036238	-	100	99.169	Pan_paniscus
ENSTSYG00000005334	RBFOX1	100	98.555	ENSPPRG00000006546	RBFOX1	96	98.061	Panthera_pardus
ENSTSYG00000005334	RBFOX1	100	86.327	ENSPTIG00000021154	RBFOX1	99	86.792	Panthera_tigris_altaica
ENSTSYG00000005334	RBFOX1	100	99.229	ENSPTRG00000007744	RBFOX1	99	97.878	Pan_troglodytes
ENSTSYG00000005334	RBFOX1	100	99.229	ENSPANG00000026500	RBFOX1	96	99.169	Papio_anubis
ENSTSYG00000005334	RBFOX1	100	89.807	ENSPKIG00000009667	-	95	90.909	Paramormyrops_kingsleyae
ENSTSYG00000005334	RBFOX1	73	93.156	ENSPKIG00000019353	rbfox1	86	93.156	Paramormyrops_kingsleyae
ENSTSYG00000005334	RBFOX1	100	92.545	ENSPSIG00000006523	RBFOX1	97	92.545	Pelodiscus_sinensis
ENSTSYG00000005334	RBFOX1	100	97.686	ENSPEMG00000017607	Rbfox1	98	95.630	Peromyscus_maniculatus_bairdii
ENSTSYG00000005334	RBFOX1	75	91.781	ENSPCIG00000026887	RBFOX1	100	94.014	Phascolarctos_cinereus
ENSTSYG00000005334	RBFOX1	100	93.973	ENSPPYG00000007079	-	93	99.178	Pongo_abelii
ENSTSYG00000005334	RBFOX1	93	87.679	ENSPCAG00000002630	RBFOX1	92	89.685	Procavia_capensis
ENSTSYG00000005334	RBFOX1	100	99.229	ENSPCOG00000025687	RBFOX1	96	99.169	Propithecus_coquereli
ENSTSYG00000005334	RBFOX1	100	94.344	ENSPVAG00000013467	RBFOX1	93	94.344	Pteropus_vampyrus
ENSTSYG00000005334	RBFOX1	97	86.992	ENSPNAG00000023109	rbfox1	100	86.992	Pygocentrus_nattereri
ENSTSYG00000005334	RBFOX1	100	95.373	ENSRNOG00000002827	Rbfox1	97	95.082	Rattus_norvegicus
ENSTSYG00000005334	RBFOX1	100	99.169	ENSRBIG00000044478	RBFOX1	100	99.169	Rhinopithecus_bieti
ENSTSYG00000005334	RBFOX1	100	99.229	ENSRROG00000044411	RBFOX1	96	99.169	Rhinopithecus_roxellana
ENSTSYG00000005334	RBFOX1	100	99.133	ENSSBOG00000033726	RBFOX1	98	98.922	Saimiri_boliviensis_boliviensis
ENSTSYG00000005334	RBFOX1	100	91.260	ENSSHAG00000009257	RBFOX1	98	91.260	Sarcophilus_harrisii
ENSTSYG00000005334	RBFOX1	100	77.008	ENSSFOG00015023675	rbfox1	97	86.667	Scleropages_formosus
ENSTSYG00000005334	RBFOX1	89	75.988	ENSSFOG00015009955	-	83	75.988	Scleropages_formosus
ENSTSYG00000005334	RBFOX1	100	82.540	ENSSMAG00000015505	rbfox1	94	80.473	Scophthalmus_maximus
ENSTSYG00000005334	RBFOX1	100	80.274	ENSSDUG00000016413	rbfox1	99	80.000	Seriola_dumerili
ENSTSYG00000005334	RBFOX1	88	77.743	ENSSLDG00000009353	rbfox1	95	79.000	Seriola_lalandi_dorsalis
ENSTSYG00000005334	RBFOX1	86	89.776	ENSSPUG00000009732	RBFOX1	87	89.776	Sphenodon_punctatus
ENSTSYG00000005334	RBFOX1	100	81.530	ENSSPAG00000009723	rbfox1	100	81.266	Stegastes_partitus
ENSTSYG00000005334	RBFOX1	100	96.627	ENSSSCG00000007917	RBFOX1	100	98.588	Sus_scrofa
ENSTSYG00000005334	RBFOX1	100	92.545	ENSTGUG00000004562	RBFOX1	99	92.545	Taeniopygia_guttata
ENSTSYG00000005334	RBFOX1	100	81.217	ENSTRUG00000020940	rbfox1	99	81.217	Takifugu_rubripes
ENSTSYG00000005334	RBFOX1	72	57.006	ENSTNIG00000002567	rbfox1	100	64.460	Tetraodon_nigroviridis
ENSTSYG00000005334	RBFOX1	66	100.000	ENSTBEG00000009169	-	60	100.000	Tupaia_belangeri
ENSTSYG00000005334	RBFOX1	100	98.201	ENSTTRG00000005700	RBFOX1	93	98.201	Tursiops_truncatus
ENSTSYG00000005334	RBFOX1	97	98.361	ENSUAMG00000024633	RBFOX1	97	98.361	Ursus_americanus
ENSTSYG00000005334	RBFOX1	97	88.798	ENSUMAG00000003579	RBFOX1	97	89.071	Ursus_maritimus
ENSTSYG00000005334	RBFOX1	79	99.351	ENSVPAG00000001284	RBFOX1	74	99.351	Vicugna_pacos
ENSTSYG00000005334	RBFOX1	100	98.061	ENSVVUG00000017311	RBFOX1	97	98.630	Vulpes_vulpes