EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000005403 (Gene tree)
Gene ID: 103262810
Gene Symbol: TNRC6C
Alias: -
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Minus strand
Length: 69870 bases
Position: chrKE940513.1:139927-209796
Accession: 103262810
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000004951	Ago_hook	PF10427.9	7.1e-22	1	1
ENSTSYP00000004951	RRM_1	PF00076.22	0.00025	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000005410	TNRC6C-201	8200	XM_008060455	ENSTSYP00000004951	1724 (aa)	XP_008058646	A0A1U7TYD5

Gene Model

Click here to download ENSTSYG00000005403's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000005403's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000005403	TNRC6C	99	43.471	ENSTSYG00000012711	TNRC6A	85	43.165
ENSTSYG00000005403	TNRC6C	93	37.317	ENSTSYG00000011836	TNRC6B	80	40.694

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000005403	TNRC6C	100	95.713	ENSG00000078687	TNRC6C	100	95.829	Homo_sapiens
ENSTSYG00000005403	TNRC6C	80	53.431	ENSAPOG00000019749	tnrc6c1	92	50.000	Acanthochromis_polyacanthus
ENSTSYG00000005403	TNRC6C	100	89.983	ENSAMEG00000013756	TNRC6C	96	89.868	Ailuropoda_melanoleuca
ENSTSYG00000005403	TNRC6C	94	50.359	ENSACIG00000008075	tnrc6c1	79	54.170	Amphilophus_citrinellus
ENSTSYG00000005403	TNRC6C	78	64.910	ENSAOCG00000023968	tnrc6c1	92	51.283	Amphiprion_ocellaris
ENSTSYG00000005403	TNRC6C	80	54.050	ENSAPEG00000009020	tnrc6c1	92	51.228	Amphiprion_percula
ENSTSYG00000005403	TNRC6C	100	87.271	ENSAPLG00000005456	TNRC6C	90	87.171	Anas_platyrhynchos
ENSTSYG00000005403	TNRC6C	100	87.782	ENSACAG00000016198	TNRC6C	88	87.782	Anolis_carolinensis
ENSTSYG00000005403	TNRC6C	100	94.922	ENSANAG00000021554	TNRC6C	100	93.171	Aotus_nancymaae
ENSTSYG00000005403	TNRC6C	100	49.834	ENSACLG00000000424	tnrc6c1	91	49.687	Astatotilapia_calliptera
ENSTSYG00000005403	TNRC6C	97	91.867	ENSBTAG00000018658	TNRC6C	100	88.831	Bos_taurus
ENSTSYG00000005403	TNRC6C	100	95.211	ENSCJAG00000019431	TNRC6C	100	93.171	Callithrix_jacchus
ENSTSYG00000005403	TNRC6C	100	92.236	ENSCAFG00000005224	TNRC6C	89	92.294	Canis_familiaris
ENSTSYG00000005403	TNRC6C	100	91.811	ENSCAFG00020006661	TNRC6C	100	89.166	Canis_lupus_dingo
ENSTSYG00000005403	TNRC6C	100	88.290	ENSCHIG00000026004	TNRC6C	100	85.797	Capra_hircus
ENSTSYG00000005403	TNRC6C	100	83.795	ENSCAPG00000007307	TNRC6C	89	83.891	Cavia_aperea
ENSTSYG00000005403	TNRC6C	100	89.211	ENSCPOG00000000467	TNRC6C	97	89.501	Cavia_porcellus
ENSTSYG00000005403	TNRC6C	100	95.884	ENSCCAG00000030524	TNRC6C	100	95.884	Cebus_capucinus
ENSTSYG00000005403	TNRC6C	100	95.942	ENSCATG00000033135	TNRC6C	100	95.942	Cercocebus_atys
ENSTSYG00000005403	TNRC6C	100	91.821	ENSCLAG00000011139	TNRC6C	89	91.763	Chinchilla_lanigera
ENSTSYG00000005403	TNRC6C	100	96.000	ENSCSAG00000005167	TNRC6C	89	96.000	Chlorocebus_sabaeus
ENSTSYG00000005403	TNRC6C	76	86.657	ENSCHOG00000000088	TNRC6C	72	85.325	Choloepus_hoffmanni
ENSTSYG00000005403	TNRC6C	100	86.285	ENSCPBG00000027960	TNRC6C	100	86.400	Chrysemys_picta_bellii
ENSTSYG00000005403	TNRC6C	100	95.536	ENSCANG00000041771	TNRC6C	100	95.536	Colobus_angolensis_palliatus
ENSTSYG00000005403	TNRC6C	100	88.632	ENSCGRG00001022686	Tnrc6c	100	87.536	Cricetulus_griseus_chok1gshd
ENSTSYG00000005403	TNRC6C	100	89.043	ENSCGRG00000018041	Tnrc6c	100	87.536	Cricetulus_griseus_crigri
ENSTSYG00000005403	TNRC6C	80	51.666	ENSCSEG00000012744	tnrc6c1	88	49.021	Cynoglossus_semilaevis
ENSTSYG00000005403	TNRC6C	94	55.918	ENSDARG00000076847	tnrc6c1	96	55.609	Danio_rerio
ENSTSYG00000005403	TNRC6C	100	91.725	ENSDNOG00000003247	TNRC6C	91	91.782	Dasypus_novemcinctus
ENSTSYG00000005403	TNRC6C	100	85.121	ENSDORG00000004558	Tnrc6c	100	84.890	Dipodomys_ordii
ENSTSYG00000005403	TNRC6C	90	80.808	ENSETEG00000005527	TNRC6C	87	80.808	Echinops_telfairi
ENSTSYG00000005403	TNRC6C	100	89.913	ENSEASG00005004799	TNRC6C	100	89.913	Equus_asinus_asinus
ENSTSYG00000005403	TNRC6C	100	91.942	ENSECAG00000012486	TNRC6C	90	91.652	Equus_caballus
ENSTSYG00000005403	TNRC6C	96	91.312	ENSEEUG00000010008	TNRC6C	93	91.312	Erinaceus_europaeus
ENSTSYG00000005403	TNRC6C	100	89.689	ENSFCAG00000028358	TNRC6C	100	88.042	Felis_catus
ENSTSYG00000005403	TNRC6C	100	87.514	ENSFALG00000000848	TNRC6C	100	86.833	Ficedula_albicollis
ENSTSYG00000005403	TNRC6C	100	90.893	ENSFDAG00000010368	TNRC6C	97	91.183	Fukomys_damarensis
ENSTSYG00000005403	TNRC6C	100	48.152	ENSFHEG00000002936	tnrc6c1	92	50.726	Fundulus_heteroclitus
ENSTSYG00000005403	TNRC6C	100	89.449	ENSGALG00000001725	TNRC6C	100	87.072	Gallus_gallus
ENSTSYG00000005403	TNRC6C	100	49.402	ENSGAFG00000019019	tnrc6c1	97	49.607	Gambusia_affinis
ENSTSYG00000005403	TNRC6C	80	52.228	ENSGACG00000012320	tnrc6c1	86	49.403	Gasterosteus_aculeatus
ENSTSYG00000005403	TNRC6C	100	87.854	ENSGAGG00000022043	TNRC6C	96	88.086	Gopherus_agassizii
ENSTSYG00000005403	TNRC6C	100	95.075	ENSGGOG00000011304	TNRC6C	100	95.017	Gorilla_gorilla
ENSTSYG00000005403	TNRC6C	100	49.944	ENSHBUG00000010846	tnrc6c1	97	47.987	Haplochromis_burtoni
ENSTSYG00000005403	TNRC6C	100	91.473	ENSHGLG00000004809	TNRC6C	89	91.415	Heterocephalus_glaber_female
ENSTSYG00000005403	TNRC6C	100	90.704	ENSHGLG00100012597	TNRC6C	89	90.704	Heterocephalus_glaber_male
ENSTSYG00000005403	TNRC6C	100	52.551	ENSIPUG00000000818	tnrc6c1	89	53.070	Ictalurus_punctatus
ENSTSYG00000005403	TNRC6C	100	89.867	ENSSTOG00000009101	TNRC6C	97	89.751	Ictidomys_tridecemlineatus
ENSTSYG00000005403	TNRC6C	100	87.536	ENSJJAG00000017055	Tnrc6c	89	87.421	Jaculus_jaculus
ENSTSYG00000005403	TNRC6C	94	50.570	ENSKMAG00000021023	tnrc6c1	97	50.233	Kryptolebias_marmoratus
ENSTSYG00000005403	TNRC6C	100	74.670	ENSLACG00000015283	TNRC6C	97	74.871	Latimeria_chalumnae
ENSTSYG00000005403	TNRC6C	99	56.092	ENSLOCG00000013377	tnrc6c1	87	58.039	Lepisosteus_oculatus
ENSTSYG00000005403	TNRC6C	100	89.607	ENSLAFG00000011122	TNRC6C	96	87.199	Loxodonta_africana
ENSTSYG00000005403	TNRC6C	100	96.058	ENSMFAG00000043943	TNRC6C	100	96.058	Macaca_fascicularis
ENSTSYG00000005403	TNRC6C	100	96.058	ENSMMUG00000011924	TNRC6C	100	93.576	Macaca_mulatta
ENSTSYG00000005403	TNRC6C	100	95.557	ENSMNEG00000030405	TNRC6C	100	93.519	Macaca_nemestrina
ENSTSYG00000005403	TNRC6C	100	96.000	ENSMLEG00000033436	TNRC6C	100	96.000	Mandrillus_leucophaeus
ENSTSYG00000005403	TNRC6C	88	55.045	ENSMAMG00000023613	tnrc6c1	97	52.079	Mastacembelus_armatus
ENSTSYG00000005403	TNRC6C	100	49.834	ENSMZEG00005010920	tnrc6c1	92	48.854	Maylandia_zebra
ENSTSYG00000005403	TNRC6C	100	80.458	ENSMGAG00000003906	TNRC6C	90	80.493	Meleagris_gallopavo
ENSTSYG00000005403	TNRC6C	100	88.402	ENSMAUG00000021618	Tnrc6c	100	88.286	Mesocricetus_auratus
ENSTSYG00000005403	TNRC6C	100	94.667	ENSMICG00000003952	TNRC6C	100	94.551	Microcebus_murinus
ENSTSYG00000005403	TNRC6C	100	90.493	ENSMOCG00000015879	Tnrc6c	97	90.377	Microtus_ochrogaster
ENSTSYG00000005403	TNRC6C	79	54.316	ENSMMOG00000005203	tnrc6c1	100	49.834	Mola_mola
ENSTSYG00000005403	TNRC6C	100	85.648	ENSMODG00000001785	TNRC6C	89	85.303	Monodelphis_domestica
ENSTSYG00000005403	TNRC6C	100	90.377	MGP_CAROLIEiJ_G0017465	Tnrc6c	97	90.261	Mus_caroli
ENSTSYG00000005403	TNRC6C	100	90.145	ENSMUSG00000025571	Tnrc6c	97	90.029	Mus_musculus
ENSTSYG00000005403	TNRC6C	100	89.971	MGP_PahariEiJ_G0018593	Tnrc6c	97	89.855	Mus_pahari
ENSTSYG00000005403	TNRC6C	100	90.203	MGP_SPRETEiJ_G0018309	Tnrc6c	97	90.087	Mus_spretus
ENSTSYG00000005403	TNRC6C	100	89.340	ENSMPUG00000013348	TNRC6C	88	89.455	Mustela_putorius_furo
ENSTSYG00000005403	TNRC6C	100	83.324	ENSMLUG00000014431	TNRC6C	88	83.496	Myotis_lucifugus
ENSTSYG00000005403	TNRC6C	100	89.088	ENSNGAG00000012203	Tnrc6c	89	88.972	Nannospalax_galili
ENSTSYG00000005403	TNRC6C	100	50.532	ENSNBRG00000005344	tnrc6c1	91	50.430	Neolamprologus_brichardi
ENSTSYG00000005403	TNRC6C	100	92.902	ENSNLEG00000000047	TNRC6C	89	92.729	Nomascus_leucogenys
ENSTSYG00000005403	TNRC6C	98	79.621	ENSMEUG00000005104	TNRC6C	96	90.625	Notamacropus_eugenii
ENSTSYG00000005403	TNRC6C	100	91.415	ENSODEG00000012499	TNRC6C	100	91.589	Octodon_degus
ENSTSYG00000005403	TNRC6C	100	49.526	ENSONIG00000002210	tnrc6c1	96	52.456	Oreochromis_niloticus
ENSTSYG00000005403	TNRC6C	99	62.693	ENSOANG00000009758	-	84	65.021	Ornithorhynchus_anatinus
ENSTSYG00000005403	TNRC6C	92	49.070	ENSORLG00000009837	tnrc6c1	100	67.658	Oryzias_latipes
ENSTSYG00000005403	TNRC6C	92	50.150	ENSORLG00020016510	tnrc6c1	97	49.916	Oryzias_latipes_hni
ENSTSYG00000005403	TNRC6C	70	45.298	ENSORLG00015000171	tnrc6c1	94	45.743	Oryzias_latipes_hsok
ENSTSYG00000005403	TNRC6C	92	50.779	ENSOMEG00000000357	tnrc6c1	94	49.810	Oryzias_melastigma
ENSTSYG00000005403	TNRC6C	100	93.271	ENSOGAG00000007197	TNRC6C	100	93.271	Otolemur_garnettii
ENSTSYG00000005403	TNRC6C	96	85.524	ENSOARG00000006041	TNRC6C	87	85.758	Ovis_aries
ENSTSYG00000005403	TNRC6C	100	95.768	ENSPPAG00000027160	TNRC6C	100	95.768	Pan_paniscus
ENSTSYG00000005403	TNRC6C	100	89.689	ENSPPRG00000018881	TNRC6C	100	88.042	Panthera_pardus
ENSTSYG00000005403	TNRC6C	90	85.590	ENSPTIG00000008791	TNRC6C	69	73.743	Panthera_tigris_altaica
ENSTSYG00000005403	TNRC6C	100	95.768	ENSPTRG00000009699	TNRC6C	100	95.768	Pan_troglodytes
ENSTSYG00000005403	TNRC6C	100	95.615	ENSPANG00000019994	TNRC6C	100	93.739	Papio_anubis
ENSTSYG00000005403	TNRC6C	96	53.709	ENSPKIG00000005428	tnrc6c1	98	52.854	Paramormyrops_kingsleyae
ENSTSYG00000005403	TNRC6C	100	84.037	ENSPSIG00000018069	TNRC6C	97	84.153	Pelodiscus_sinensis
ENSTSYG00000005403	TNRC6C	66	58.351	ENSPMGG00000022911	tnrc6c1	97	63.673	Periophthalmus_magnuspinnatus
ENSTSYG00000005403	TNRC6C	100	89.729	ENSPEMG00000009785	Tnrc6c	100	87.363	Peromyscus_maniculatus_bairdii
ENSTSYG00000005403	TNRC6C	56	86.626	ENSPCIG00000017421	-	99	86.626	Phascolarctos_cinereus
ENSTSYG00000005403	TNRC6C	100	49.538	ENSPFOG00000012560	tnrc6c1	97	57.442	Poecilia_formosa
ENSTSYG00000005403	TNRC6C	100	50.450	ENSPLAG00000021055	tnrc6c1	97	51.399	Poecilia_latipinna
ENSTSYG00000005403	TNRC6C	100	96.116	ENSPPYG00000008679	TNRC6C	88	96.116	Pongo_abelii
ENSTSYG00000005403	TNRC6C	93	85.683	ENSPCAG00000012510	TNRC6C	91	85.466	Procavia_capensis
ENSTSYG00000005403	TNRC6C	100	95.362	ENSPCOG00000021451	TNRC6C	100	95.362	Propithecus_coquereli
ENSTSYG00000005403	TNRC6C	96	91.525	ENSPVAG00000002008	TNRC6C	93	91.525	Pteropus_vampyrus
ENSTSYG00000005403	TNRC6C	100	49.471	ENSPNYG00000014477	tnrc6c1	97	47.902	Pundamilia_nyererei
ENSTSYG00000005403	TNRC6C	100	89.288	ENSRNOG00000022395	Tnrc6c	100	89.346	Rattus_norvegicus
ENSTSYG00000005403	TNRC6C	100	96.000	ENSRBIG00000027777	TNRC6C	100	96.000	Rhinopithecus_bieti
ENSTSYG00000005403	TNRC6C	100	95.942	ENSRROG00000042912	TNRC6C	100	95.942	Rhinopithecus_roxellana
ENSTSYG00000005403	TNRC6C	100	95.420	ENSSBOG00000023981	TNRC6C	100	95.420	Saimiri_boliviensis_boliviensis
ENSTSYG00000005403	TNRC6C	54	90.693	ENSSHAG00000018330	-	100	90.584	Sarcophilus_harrisii
ENSTSYG00000005403	TNRC6C	91	58.118	ENSSFOG00015006475	tnrc6c1	92	52.755	Scleropages_formosus
ENSTSYG00000005403	TNRC6C	69	56.871	ENSSFOG00015004735	-	99	58.500	Scleropages_formosus
ENSTSYG00000005403	TNRC6C	100	47.443	ENSSMAG00000012761	tnrc6c1	99	49.489	Scophthalmus_maximus
ENSTSYG00000005403	TNRC6C	94	50.567	ENSSDUG00000002366	tnrc6c1	90	51.617	Seriola_dumerili
ENSTSYG00000005403	TNRC6C	94	48.752	ENSSLDG00000025613	tnrc6c1	97	49.775	Seriola_lalandi_dorsalis
ENSTSYG00000005403	TNRC6C	91	89.076	ENSSARG00000006816	TNRC6C	88	89.076	Sorex_araneus
ENSTSYG00000005403	TNRC6C	83	87.561	ENSSPUG00000007341	TNRC6C	91	87.144	Sphenodon_punctatus
ENSTSYG00000005403	TNRC6C	79	53.836	ENSSPAG00000014977	tnrc6c1	89	50.762	Stegastes_partitus
ENSTSYG00000005403	TNRC6C	96	92.111	ENSSSCG00000034373	TNRC6C	100	86.029	Sus_scrofa
ENSTSYG00000005403	TNRC6C	100	86.871	ENSTGUG00000007733	TNRC6C	97	86.698	Taeniopygia_guttata
ENSTSYG00000005403	TNRC6C	79	55.267	ENSTRUG00000011685	tnrc6c1	97	50.625	Takifugu_rubripes
ENSTSYG00000005403	TNRC6C	94	53.239	ENSTNIG00000005273	tnrc6c1	100	61.019	Tetraodon_nigroviridis
ENSTSYG00000005403	TNRC6C	65	85.558	ENSTBEG00000005046	TNRC6C	95	85.922	Tupaia_belangeri
ENSTSYG00000005403	TNRC6C	100	89.647	ENSTTRG00000010828	TNRC6C	97	89.647	Tursiops_truncatus
ENSTSYG00000005403	TNRC6C	100	89.862	ENSUMAG00000013614	TNRC6C	90	89.862	Ursus_maritimus
ENSTSYG00000005403	TNRC6C	53	78.493	ENSVPAG00000006765	-	99	78.375	Vicugna_pacos
ENSTSYG00000005403	TNRC6C	100	90.556	ENSVVUG00000015268	TNRC6C	100	90.556	Vulpes_vulpes
ENSTSYG00000005403	TNRC6C	100	73.621	ENSXETG00000019470	tnrc6c	100	73.506	Xenopus_tropicalis
ENSTSYG00000005403	TNRC6C	100	49.155	ENSXMAG00000025971	tnrc6c1	97	49.522	Xiphophorus_maculatus