EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000005712 (Gene tree)
Gene ID: 103259471
Gene Symbol: -
Alias: -
Full Name: cleavage and polyadenylation specific factor 4
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Minus strand
Length: 16002 bases
Position: chrKE938965.1:289918-305919
Accession: 103259471
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000016689	zf-CCCH	PF00642.24	1.9e-20	1	2
ENSTSYP00000016689	zf-CCCH	PF00642.24	1.9e-20	2	2
ENSTSYP00000005240	zf-CCCH	PF00642.24	1.5e-15	1	2
ENSTSYP00000005240	zf-CCCH	PF00642.24	1.5e-15	2	2
ENSTSYP00000005240	zf-CCHC	PF00098.23	3.4e-06	1	1
ENSTSYP00000016689	zf-CCHC	PF00098.23	4.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000005717	-	636	-	ENSTSYP00000005240	211 (aa)	-	UPI000C2F6644
ENSTSYT00000034252	-	1660	XM_008057133	ENSTSYP00000016689	244 (aa)	XP_008055324	A0A1U7TBW9

Gene Model

Click here to download ENSTSYG00000005712's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000005712's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000005712	-	88	92.593	ENSTSYG00000008195	-	99	92.000
ENSTSYG00000005712	-	100	91.020	ENSTSYG00000014604	-	100	91.020

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000005712	-	100	99.180	ENSG00000160917	CPSF4	100	100.000	Homo_sapiens
ENSTSYG00000005712	-	64	68.927	ENSAPOG00000004921	cpsf4	100	68.927	Acanthochromis_polyacanthus
ENSTSYG00000005712	-	100	89.963	ENSAMEG00000006252	CPSF4	100	89.963	Ailuropoda_melanoleuca
ENSTSYG00000005712	-	100	86.885	ENSACIG00000009248	cpsf4	100	86.885	Amphilophus_citrinellus
ENSTSYG00000005712	-	100	81.887	ENSAOCG00000019616	cpsf4	100	81.887	Amphiprion_ocellaris
ENSTSYG00000005712	-	100	81.887	ENSAPEG00000011679	cpsf4	100	81.887	Amphiprion_percula
ENSTSYG00000005712	-	100	84.615	ENSATEG00000007010	cpsf4	100	85.020	Anabas_testudineus
ENSTSYG00000005712	-	100	84.015	ENSACAG00000012941	CPSF4	89	83.643	Anolis_carolinensis
ENSTSYG00000005712	-	100	99.052	ENSANAG00000021360	CPSF4	100	99.052	Aotus_nancymaae
ENSTSYG00000005712	-	100	81.148	ENSACLG00000010374	cpsf4	100	81.148	Astatotilapia_calliptera
ENSTSYG00000005712	-	100	86.256	ENSAMXG00000031647	cpsf4	100	84.906	Astyanax_mexicanus
ENSTSYG00000005712	-	100	98.770	ENSBTAG00000002090	CPSF4	100	98.770	Bos_taurus
ENSTSYG00000005712	-	100	99.052	ENSCJAG00000015826	CPSF4	100	99.052	Callithrix_jacchus
ENSTSYG00000005712	-	100	98.113	ENSCAFG00000015036	CPSF4	100	98.113	Canis_familiaris
ENSTSYG00000005712	-	100	90.521	ENSCAFG00020014462	CPSF4	100	90.521	Canis_lupus_dingo
ENSTSYG00000005712	-	100	99.052	ENSCHIG00000014313	CPSF4	100	99.052	Capra_hircus
ENSTSYG00000005712	-	76	99.375	ENSCAPG00000013881	CPSF4	82	99.375	Cavia_aperea
ENSTSYG00000005712	-	100	99.180	ENSCPOG00000001783	CPSF4	100	99.180	Cavia_porcellus
ENSTSYG00000005712	-	100	99.052	ENSCCAG00000028291	CPSF4	100	99.052	Cebus_capucinus
ENSTSYG00000005712	-	100	99.052	ENSCATG00000038440	CPSF4	100	99.052	Cercocebus_atys
ENSTSYG00000005712	-	100	98.578	ENSCLAG00000007050	CPSF4	100	98.578	Chinchilla_lanigera
ENSTSYG00000005712	-	100	89.963	ENSCSAG00000017795	CPSF4	100	89.963	Chlorocebus_sabaeus
ENSTSYG00000005712	-	68	81.325	ENSCPBG00000010269	-	100	81.325	Chrysemys_picta_bellii
ENSTSYG00000005712	-	78	82.407	ENSCPBG00000020869	CPSF4	100	81.944	Chrysemys_picta_bellii
ENSTSYG00000005712	-	96	56.299	ENSCING00000021080	-	97	56.299	Ciona_intestinalis
ENSTSYG00000005712	-	96	52.650	ENSCSAVG00000011469	-	97	42.349	Ciona_savignyi
ENSTSYG00000005712	-	100	99.052	ENSCANG00000019384	CPSF4	100	99.052	Colobus_angolensis_palliatus
ENSTSYG00000005712	-	100	99.180	ENSCGRG00001024184	Cpsf4	100	99.180	Cricetulus_griseus_chok1gshd
ENSTSYG00000005712	-	100	99.052	ENSCGRG00000013892	Cpsf4	100	99.052	Cricetulus_griseus_crigri
ENSTSYG00000005712	-	100	85.308	ENSCSEG00000019055	cpsf4	100	85.308	Cynoglossus_semilaevis
ENSTSYG00000005712	-	100	80.755	ENSCVAG00000016528	cpsf4	100	80.755	Cyprinodon_variegatus
ENSTSYG00000005712	-	100	79.705	ENSDARG00000020217	cpsf4	100	80.074	Danio_rerio
ENSTSYG00000005712	-	100	90.335	ENSDNOG00000006344	CPSF4	100	90.335	Dasypus_novemcinctus
ENSTSYG00000005712	-	79	87.558	ENSDORG00000000742	Cpsf4	100	87.558	Dipodomys_ordii
ENSTSYG00000005712	-	100	51.839	FBgn0015621	Clp	99	53.425	Drosophila_melanogaster
ENSTSYG00000005712	-	77	100.000	ENSETEG00000002608	CPSF4	70	100.000	Echinops_telfairi
ENSTSYG00000005712	-	99	70.968	ENSEBUG00000012552	cpsf4	98	69.758	Eptatretus_burgeri
ENSTSYG00000005712	-	100	99.180	ENSEASG00005002487	CPSF4	100	99.180	Equus_asinus_asinus
ENSTSYG00000005712	-	100	99.052	ENSECAG00000007525	CPSF4	100	99.052	Equus_caballus
ENSTSYG00000005712	-	68	100.000	ENSEEUG00000002158	CPSF4	73	100.000	Erinaceus_europaeus
ENSTSYG00000005712	-	100	79.779	ENSELUG00000011481	cpsf4	100	79.779	Esox_lucius
ENSTSYG00000005712	-	100	99.052	ENSFCAG00000015070	CPSF4	100	99.052	Felis_catus
ENSTSYG00000005712	-	68	57.558	ENSFALG00000012906	-	100	57.558	Ficedula_albicollis
ENSTSYG00000005712	-	100	95.492	ENSFALG00000013799	CPSF4	100	95.492	Ficedula_albicollis
ENSTSYG00000005712	-	88	98.378	ENSFDAG00000014092	CPSF4	100	98.378	Fukomys_damarensis
ENSTSYG00000005712	-	100	80.000	ENSFHEG00000010880	cpsf4	100	80.000	Fundulus_heteroclitus
ENSTSYG00000005712	-	100	80.620	ENSGMOG00000002330	cpsf4	100	80.620	Gadus_morhua
ENSTSYG00000005712	-	100	95.492	ENSGALG00000004714	CPSF4	100	95.492	Gallus_gallus
ENSTSYG00000005712	-	99	39.106	ENSGALG00000004441	-	98	37.989	Gallus_gallus
ENSTSYG00000005712	-	100	80.682	ENSGAFG00000010580	cpsf4	100	80.682	Gambusia_affinis
ENSTSYG00000005712	-	100	82.283	ENSGACG00000007792	cpsf4	100	82.283	Gasterosteus_aculeatus
ENSTSYG00000005712	-	100	85.502	ENSGAGG00000021835	CPSF4	100	85.130	Gopherus_agassizii
ENSTSYG00000005712	-	75	77.473	ENSGAGG00000020579	-	92	81.818	Gopherus_agassizii
ENSTSYG00000005712	-	100	99.052	ENSGGOG00000015131	CPSF4	100	99.052	Gorilla_gorilla
ENSTSYG00000005712	-	100	80.377	ENSHBUG00000013699	cpsf4	100	80.377	Haplochromis_burtoni
ENSTSYG00000005712	-	100	98.578	ENSHGLG00000017150	CPSF4	100	98.578	Heterocephalus_glaber_female
ENSTSYG00000005712	-	83	96.591	ENSHGLG00100009215	-	100	96.591	Heterocephalus_glaber_male
ENSTSYG00000005712	-	100	70.616	ENSHGLG00100017302	-	100	68.246	Heterocephalus_glaber_male
ENSTSYG00000005712	-	100	80.000	ENSHCOG00000004397	cpsf4	100	80.000	Hippocampus_comes
ENSTSYG00000005712	-	100	77.860	ENSIPUG00000017147	cpsf4	100	79.336	Ictalurus_punctatus
ENSTSYG00000005712	-	100	99.052	ENSSTOG00000001688	CPSF4	100	99.052	Ictidomys_tridecemlineatus
ENSTSYG00000005712	-	100	98.578	ENSJJAG00000019426	Cpsf4	100	98.578	Jaculus_jaculus
ENSTSYG00000005712	-	100	78.868	ENSKMAG00000015642	cpsf4	100	78.868	Kryptolebias_marmoratus
ENSTSYG00000005712	-	100	66.260	ENSLACG00000018470	-	100	64.898	Latimeria_chalumnae
ENSTSYG00000005712	-	100	83.704	ENSLACG00000010938	CPSF4	100	83.704	Latimeria_chalumnae
ENSTSYG00000005712	-	100	81.784	ENSLOCG00000004814	cpsf4	100	84.387	Lepisosteus_oculatus
ENSTSYG00000005712	-	100	89.591	ENSLAFG00000000159	CPSF4	100	98.137	Loxodonta_africana
ENSTSYG00000005712	-	100	99.052	ENSMFAG00000001462	CPSF4	100	99.476	Macaca_fascicularis
ENSTSYG00000005712	-	100	99.052	ENSMMUG00000019191	CPSF4	100	99.052	Macaca_mulatta
ENSTSYG00000005712	-	100	99.052	ENSMNEG00000032306	CPSF4	100	99.052	Macaca_nemestrina
ENSTSYG00000005712	-	100	99.052	ENSMLEG00000034721	CPSF4	100	99.052	Mandrillus_leucophaeus
ENSTSYG00000005712	-	100	80.451	ENSMAMG00000006244	cpsf4	100	80.451	Mastacembelus_armatus
ENSTSYG00000005712	-	100	80.377	ENSMZEG00005007515	cpsf4	100	80.377	Maylandia_zebra
ENSTSYG00000005712	-	86	94.762	ENSMGAG00000004235	CPSF4	100	94.762	Meleagris_gallopavo
ENSTSYG00000005712	-	100	99.052	ENSMAUG00000021253	Cpsf4	100	99.052	Mesocricetus_auratus
ENSTSYG00000005712	-	100	98.578	ENSMICG00000017429	CPSF4	100	98.578	Microcebus_murinus
ENSTSYG00000005712	-	100	99.052	ENSMOCG00000014901	Cpsf4	100	99.052	Microtus_ochrogaster
ENSTSYG00000005712	-	100	85.308	ENSMMOG00000001813	cpsf4	100	85.308	Mola_mola
ENSTSYG00000005712	-	100	88.848	ENSMODG00000001367	CPSF4	100	88.848	Monodelphis_domestica
ENSTSYG00000005712	-	100	82.397	ENSMALG00000012611	cpsf4	100	81.648	Monopterus_albus
ENSTSYG00000005712	-	100	99.180	MGP_CAROLIEiJ_G0028012	Cpsf4	100	99.180	Mus_caroli
ENSTSYG00000005712	-	100	99.180	ENSMUSG00000029625	Cpsf4	100	99.180	Mus_musculus
ENSTSYG00000005712	-	100	99.180	MGP_PahariEiJ_G0024581	Cpsf4	100	99.180	Mus_pahari
ENSTSYG00000005712	-	100	98.770	MGP_SPRETEiJ_G0029013	Cpsf4	100	98.770	Mus_spretus
ENSTSYG00000005712	-	100	89.963	ENSMPUG00000016508	CPSF4	100	89.963	Mustela_putorius_furo
ENSTSYG00000005712	-	86	98.095	ENSMLUG00000010980	CPSF4	100	98.095	Myotis_lucifugus
ENSTSYG00000005712	-	100	98.578	ENSNGAG00000001567	Cpsf4	100	98.578	Nannospalax_galili
ENSTSYG00000005712	-	90	79.253	ENSNBRG00000003943	cpsf4	98	79.253	Neolamprologus_brichardi
ENSTSYG00000005712	-	100	99.180	ENSNLEG00000011074	CPSF4	100	99.180	Nomascus_leucogenys
ENSTSYG00000005712	-	100	88.848	ENSMEUG00000006955	CPSF4	100	88.848	Notamacropus_eugenii
ENSTSYG00000005712	-	100	89.219	ENSOPRG00000013663	CPSF4	100	89.219	Ochotona_princeps
ENSTSYG00000005712	-	100	72.797	ENSODEG00000009779	-	100	72.797	Octodon_degus
ENSTSYG00000005712	-	98	84.167	ENSODEG00000018283	-	91	84.167	Octodon_degus
ENSTSYG00000005712	-	100	99.052	ENSODEG00000011181	-	100	99.052	Octodon_degus
ENSTSYG00000005712	-	100	80.377	ENSONIG00000008495	cpsf4	100	80.377	Oreochromis_niloticus
ENSTSYG00000005712	-	86	86.325	ENSOANG00000007729	CPSF4	100	86.325	Ornithorhynchus_anatinus
ENSTSYG00000005712	-	100	53.957	ENSOANG00000009568	-	100	52.878	Ornithorhynchus_anatinus
ENSTSYG00000005712	-	100	89.219	ENSOCUG00000002437	CPSF4	70	89.219	Oryctolagus_cuniculus
ENSTSYG00000005712	-	100	80.755	ENSORLG00000022798	cpsf4	100	80.755	Oryzias_latipes
ENSTSYG00000005712	-	100	80.755	ENSORLG00020008548	cpsf4	100	80.755	Oryzias_latipes_hni
ENSTSYG00000005712	-	100	80.377	ENSORLG00015019575	cpsf4	100	80.377	Oryzias_latipes_hsok
ENSTSYG00000005712	-	100	84.360	ENSOMEG00000005176	cpsf4	100	84.360	Oryzias_melastigma
ENSTSYG00000005712	-	100	89.591	ENSOGAG00000010884	CPSF4	100	89.591	Otolemur_garnettii
ENSTSYG00000005712	-	100	78.388	ENSOARG00000018668	CPSF4	100	77.289	Ovis_aries
ENSTSYG00000005712	-	100	98.578	ENSPPAG00000043355	CPSF4	100	98.578	Pan_paniscus
ENSTSYG00000005712	-	100	99.052	ENSPPRG00000003134	CPSF4	100	99.052	Panthera_pardus
ENSTSYG00000005712	-	87	98.913	ENSPTIG00000005604	CPSF4	87	98.913	Panthera_tigris_altaica
ENSTSYG00000005712	-	100	98.578	ENSPTRG00000019453	CPSF4	100	98.578	Pan_troglodytes
ENSTSYG00000005712	-	100	99.052	ENSPANG00000023123	CPSF4	100	99.052	Papio_anubis
ENSTSYG00000005712	-	100	81.022	ENSPKIG00000014278	cpsf4	100	81.022	Paramormyrops_kingsleyae
ENSTSYG00000005712	-	79	65.306	ENSPSIG00000018198	-	100	64.767	Pelodiscus_sinensis
ENSTSYG00000005712	-	78	81.944	ENSPSIG00000011229	CPSF4	100	81.481	Pelodiscus_sinensis
ENSTSYG00000005712	-	100	81.148	ENSPMGG00000017735	cpsf4	100	79.268	Periophthalmus_magnuspinnatus
ENSTSYG00000005712	-	100	99.052	ENSPEMG00000004508	Cpsf4	100	99.052	Peromyscus_maniculatus_bairdii
ENSTSYG00000005712	-	100	88.848	ENSPCIG00000024776	CPSF4	100	88.848	Phascolarctos_cinereus
ENSTSYG00000005712	-	100	80.682	ENSPFOG00000014912	cpsf4	100	80.682	Poecilia_formosa
ENSTSYG00000005712	-	100	80.081	ENSPLAG00000009599	cpsf4	100	79.675	Poecilia_latipinna
ENSTSYG00000005712	-	100	80.682	ENSPMEG00000009790	cpsf4	100	80.682	Poecilia_mexicana
ENSTSYG00000005712	-	100	79.924	ENSPREG00000018166	cpsf4	100	77.481	Poecilia_reticulata
ENSTSYG00000005712	-	86	88.034	ENSPPYG00000017378	CPSF4	100	88.034	Pongo_abelii
ENSTSYG00000005712	-	100	88.848	ENSPCAG00000001892	CPSF4	100	88.848	Procavia_capensis
ENSTSYG00000005712	-	100	99.052	ENSPCOG00000012771	CPSF4	100	99.052	Propithecus_coquereli
ENSTSYG00000005712	-	100	83.271	ENSPVAG00000007531	CPSF4	100	83.271	Pteropus_vampyrus
ENSTSYG00000005712	-	100	80.377	ENSPNYG00000018559	cpsf4	100	80.377	Pundamilia_nyererei
ENSTSYG00000005712	-	100	82.222	ENSPNAG00000003736	cpsf4	100	82.222	Pygocentrus_nattereri
ENSTSYG00000005712	-	100	99.052	ENSRNOG00000000985	Cpsf4	100	99.052	Rattus_norvegicus
ENSTSYG00000005712	-	83	99.432	ENSRBIG00000033886	CPSF4	100	99.432	Rhinopithecus_bieti
ENSTSYG00000005712	-	100	99.180	ENSRROG00000040431	CPSF4	100	99.180	Rhinopithecus_roxellana
ENSTSYG00000005712	-	100	99.052	ENSSBOG00000020493	CPSF4	100	99.476	Saimiri_boliviensis_boliviensis
ENSTSYG00000005712	-	100	88.848	ENSSHAG00000011533	CPSF4	100	88.848	Sarcophilus_harrisii
ENSTSYG00000005712	-	100	82.246	ENSSFOG00015007883	cpsf4	100	82.246	Scleropages_formosus
ENSTSYG00000005712	-	100	86.640	ENSSMAG00000006374	cpsf4	100	86.640	Scophthalmus_maximus
ENSTSYG00000005712	-	100	81.273	ENSSDUG00000018887	cpsf4	100	81.273	Seriola_dumerili
ENSTSYG00000005712	-	100	81.273	ENSSLDG00000019078	cpsf4	100	82.022	Seriola_lalandi_dorsalis
ENSTSYG00000005712	-	86	88.462	ENSSARG00000012416	CPSF4	100	88.462	Sorex_araneus
ENSTSYG00000005712	-	100	86.245	ENSSPUG00000003549	CPSF4	100	84.758	Sphenodon_punctatus
ENSTSYG00000005712	-	95	65.236	ENSSPUG00000014803	-	97	64.557	Sphenodon_punctatus
ENSTSYG00000005712	-	100	88.115	ENSSPAG00000006174	cpsf4	100	88.115	Stegastes_partitus
ENSTSYG00000005712	-	100	98.770	ENSSSCG00000026896	CPSF4	100	98.770	Sus_scrofa
ENSTSYG00000005712	-	100	94.309	ENSTGUG00000007552	CPSF4	100	94.309	Taeniopygia_guttata
ENSTSYG00000005712	-	100	78.707	ENSTRUG00000024220	cpsf4	100	78.707	Takifugu_rubripes
ENSTSYG00000005712	-	100	78.327	ENSTNIG00000006265	cpsf4	100	79.087	Tetraodon_nigroviridis
ENSTSYG00000005712	-	86	76.923	ENSTBEG00000011406	CPSF4	100	77.350	Tupaia_belangeri
ENSTSYG00000005712	-	100	78.067	ENSTTRG00000003007	CPSF4	100	78.067	Tursiops_truncatus
ENSTSYG00000005712	-	91	98.649	ENSUAMG00000008051	CPSF4	85	98.649	Ursus_americanus
ENSTSYG00000005712	-	100	98.770	ENSUMAG00000009474	CPSF4	100	98.770	Ursus_maritimus
ENSTSYG00000005712	-	100	98.770	ENSVVUG00000008824	CPSF4	100	98.770	Vulpes_vulpes
ENSTSYG00000005712	-	100	80.287	ENSXETG00000009892	cpsf4	100	81.720	Xenopus_tropicalis
ENSTSYG00000005712	-	99	61.654	ENSXETG00000004641	cpsf4l	99	60.902	Xenopus_tropicalis
ENSTSYG00000005712	-	100	84.834	ENSXCOG00000016040	cpsf4	100	84.834	Xiphophorus_couchianus
ENSTSYG00000005712	-	100	80.682	ENSXMAG00000024670	cpsf4	100	80.682	Xiphophorus_maculatus