EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000006246 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Minus strand
Length: 30270 bases
Position: chrKE946863.1:137284-167553
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000005717	zf-C2H2	PF00096.26	3.3e-57	1	11
ENSTSYP00000005717	zf-C2H2	PF00096.26	3.3e-57	2	11
ENSTSYP00000005717	zf-C2H2	PF00096.26	3.3e-57	3	11
ENSTSYP00000005717	zf-C2H2	PF00096.26	3.3e-57	4	11
ENSTSYP00000005717	zf-C2H2	PF00096.26	3.3e-57	5	11
ENSTSYP00000005717	zf-C2H2	PF00096.26	3.3e-57	6	11
ENSTSYP00000005717	zf-C2H2	PF00096.26	3.3e-57	7	11
ENSTSYP00000005717	zf-C2H2	PF00096.26	3.3e-57	8	11
ENSTSYP00000005717	zf-C2H2	PF00096.26	3.3e-57	9	11
ENSTSYP00000005717	zf-C2H2	PF00096.26	3.3e-57	10	11
ENSTSYP00000005717	zf-C2H2	PF00096.26	3.3e-57	11	11
ENSTSYP00000005717	zf-met	PF12874.7	0.00041	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000006246	-	1602	-	ENSTSYP00000005717	534 (aa)	-	UPI000C2F6127
ENSTSYT00000048665	-	339	-	ENSTSYP00000033220	113 (aa)	-	UPI000C2F4887

Gene Model

Click here to download ENSTSYG00000006246's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000006246's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000006246	-	99	47.257	ENSTSYG00000004899	ZNF2	95	47.257
ENSTSYG00000006246	-	76	48.571	ENSTSYG00000003178	ZNF384	68	48.571
ENSTSYG00000006246	-	95	40.306	ENSTSYG00000008405	-	97	40.306
ENSTSYG00000006246	-	99	44.909	ENSTSYG00000007256	ZNF596	97	44.909
ENSTSYG00000006246	-	76	34.052	ENSTSYG00000004319	ZNF770	97	44.828
ENSTSYG00000006246	-	99	43.344	ENSTSYG00000032460	ZNF670	98	45.515
ENSTSYG00000006246	-	99	57.724	ENSTSYG00000003925	ZNF226	97	55.200
ENSTSYG00000006246	-	74	37.209	ENSTSYG00000032488	ZNF646	76	37.209
ENSTSYG00000006246	-	73	50.000	ENSTSYG00000009630	PRDM5	71	50.000
ENSTSYG00000006246	-	74	39.286	ENSTSYG00000027307	ZNF423	96	39.286
ENSTSYG00000006246	-	74	41.085	ENSTSYG00000030892	SNAI2	57	41.085
ENSTSYG00000006246	-	99	54.128	ENSTSYG00000029281	ZNF582	90	54.128
ENSTSYG00000006246	-	72	33.206	ENSTSYG00000004206	GTF3A	77	33.460
ENSTSYG00000006246	-	99	53.097	ENSTSYG00000034979	ZNF599	97	53.097
ENSTSYG00000006246	-	99	41.760	ENSTSYG00000029979	ZNF317	88	41.760
ENSTSYG00000006246	-	76	49.819	ENSTSYG00000033027	ZNF768	53	51.333
ENSTSYG00000006246	-	99	55.527	ENSTSYG00000027063	ZNF235	98	55.527
ENSTSYG00000006246	-	99	50.000	ENSTSYG00000003349	-	95	50.000
ENSTSYG00000006246	-	88	44.000	ENSTSYG00000026526	ZFP64	79	41.781
ENSTSYG00000006246	-	73	41.085	ENSTSYG00000025594	SNAI3	51	41.085
ENSTSYG00000006246	-	99	60.227	ENSTSYG00000036894	ZNF829	91	60.227
ENSTSYG00000006246	-	99	47.603	ENSTSYG00000003164	ZNF136	98	49.558
ENSTSYG00000006246	-	99	50.802	ENSTSYG00000008934	ZNF225	97	50.802
ENSTSYG00000006246	-	99	49.742	ENSTSYG00000008231	ZNF81	96	51.155
ENSTSYG00000006246	-	99	41.896	ENSTSYG00000029077	ZFP1	97	41.896
ENSTSYG00000006246	-	72	45.283	ENSTSYG00000034121	WT1	58	44.037
ENSTSYG00000006246	-	88	36.412	ENSTSYG00000034049	ZNF574	87	35.572
ENSTSYG00000006246	-	77	56.011	ENSTSYG00000032827	-	80	56.011
ENSTSYG00000006246	-	99	52.800	ENSTSYG00000003915	ZNF234	97	52.800

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000006246	-	73	58.182	ENSAOCG00000013672	-	95	56.250	Amphiprion_ocellaris
ENSTSYG00000006246	-	78	50.146	ENSACLG00000008821	-	92	52.299	Astatotilapia_calliptera
ENSTSYG00000006246	-	73	54.167	ENSAMXG00000036633	-	62	54.266	Astyanax_mexicanus
ENSTSYG00000006246	-	74	56.250	ENSAMXG00000043423	-	78	56.250	Astyanax_mexicanus
ENSTSYG00000006246	-	78	53.000	ENSAMXG00000040677	-	90	53.000	Astyanax_mexicanus
ENSTSYG00000006246	-	76	53.556	ENSAMXG00000037981	-	82	53.556	Astyanax_mexicanus
ENSTSYG00000006246	-	74	47.797	ENSAMXG00000036241	-	86	48.525	Astyanax_mexicanus
ENSTSYG00000006246	-	99	54.813	ENSCGRG00001024303	-	99	54.813	Cricetulus_griseus_chok1gshd
ENSTSYG00000006246	-	93	57.143	ENSCGRG00001019143	-	93	57.143	Cricetulus_griseus_chok1gshd
ENSTSYG00000006246	-	99	54.626	ENSCGRG00001012803	-	93	54.626	Cricetulus_griseus_chok1gshd
ENSTSYG00000006246	-	96	56.769	ENSCGRG00000008531	-	99	54.386	Cricetulus_griseus_crigri
ENSTSYG00000006246	-	99	54.626	ENSCGRG00000009742	-	93	54.626	Cricetulus_griseus_crigri
ENSTSYG00000006246	-	75	50.169	ENSEBUG00000015834	-	85	50.169	Eptatretus_burgeri
ENSTSYG00000006246	-	99	47.656	ENSEBUG00000017017	-	79	47.656	Eptatretus_burgeri
ENSTSYG00000006246	-	75	46.635	ENSEBUG00000003236	-	94	49.180	Eptatretus_burgeri
ENSTSYG00000006246	-	76	45.220	ENSEBUG00000015993	-	70	45.220	Eptatretus_burgeri
ENSTSYG00000006246	-	93	42.315	ENSEBUG00000001121	-	98	42.315	Eptatretus_burgeri
ENSTSYG00000006246	-	80	49.091	ENSEBUG00000007375	-	84	49.091	Eptatretus_burgeri
ENSTSYG00000006246	-	76	51.825	ENSEBUG00000003590	-	71	51.825	Eptatretus_burgeri
ENSTSYG00000006246	-	76	49.871	ENSIPUG00000013315	-	96	49.871	Ictalurus_punctatus
ENSTSYG00000006246	-	100	52.105	ENSMAUG00000016437	-	99	54.971	Mesocricetus_auratus
ENSTSYG00000006246	-	99	55.172	ENSMAUG00000005691	-	88	55.172	Mesocricetus_auratus
ENSTSYG00000006246	-	99	54.271	ENSMOCG00000000365	-	92	54.271	Microtus_ochrogaster
ENSTSYG00000006246	-	99	58.710	MGP_CAROLIEiJ_G0018683	Zfp493	98	58.710	Mus_caroli
ENSTSYG00000006246	-	99	50.885	MGP_CAROLIEiJ_G0018660	-	75	50.885	Mus_caroli
ENSTSYG00000006246	-	97	58.363	ENSMUSG00000091474	2610021A01Rik	76	58.363	Mus_musculus
ENSTSYG00000006246	-	99	55.217	ENSMUSG00000074824	Rslcan18	78	55.217	Mus_musculus
ENSTSYG00000006246	-	94	56.393	MGP_PahariEiJ_G0012839	-	81	56.393	Mus_pahari
ENSTSYG00000006246	-	99	51.327	MGP_SPRETEiJ_G0019543	-	77	51.327	Mus_spretus
ENSTSYG00000006246	-	78	43.966	ENSPMAG00000000404	-	99	43.966	Petromyzon_marinus
ENSTSYG00000006246	-	79	55.949	ENSPNAG00000014492	-	91	56.584	Pygocentrus_nattereri
ENSTSYG00000006246	-	74	58.407	ENSPNAG00000003017	-	91	53.822	Pygocentrus_nattereri
ENSTSYG00000006246	-	99	60.434	ENSSSCG00000040389	-	98	57.721	Sus_scrofa
ENSTSYG00000006246	-	76	40.230	ENSTRUG00000014476	-	86	40.230	Takifugu_rubripes