EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTSYG00000006532 (Gene tree)
Gene ID
103256517
Gene Symbol
PABPC4
Alias
-
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Carlito_syrichta
Status
putative
Strand
Minus strand
Length
15120 bases
Position
chrKE936443.1:48151-63270
Accession
103256517
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTSYP00000006022PABPPF00658.181.9e-3111
ENSTSYP00000014523PABPPF00658.182.1e-3111
ENSTSYP00000006022RRM_5PF13893.63.1e-0912
ENSTSYP00000006022RRM_5PF13893.63.1e-0922
ENSTSYP00000014523RRM_5PF13893.63.9e-0912
ENSTSYP00000014523RRM_5PF13893.63.9e-0922
ENSTSYP00000006022RRM_1PF00076.223.4e-9214
ENSTSYP00000006022RRM_1PF00076.223.4e-9224
ENSTSYP00000006022RRM_1PF00076.223.4e-9234
ENSTSYP00000006022RRM_1PF00076.223.4e-9244
ENSTSYP00000014523RRM_1PF00076.224.4e-9214
ENSTSYP00000014523RRM_1PF00076.224.4e-9224
ENSTSYP00000014523RRM_1PF00076.224.4e-9234
ENSTSYP00000014523RRM_1PF00076.224.4e-9244
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTSYT00000006581PABPC4-2022232XM_008054368ENSTSYP00000006022631 (aa)XP_008052559A0A1U7SXH9
ENSTSYT00000034668PABPC4-2012319XM_008054366ENSTSYP00000014523660 (aa)XP_008052557A0A1U7THV3
Gene Model
Click here to download ENSTSYG00000006532's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000006532's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTSYG00000006532PABPC45338.889ENSTSYG00000003866CELF17038.636
ENSTSYG00000006532PABPC45867.978ENSTSYG00000036351PABPC59567.769
ENSTSYG00000006532PABPC49978.471ENSTSYG00000004229PABPC19978.471
ENSTSYG00000006532PABPC45833.553ENSTSYG00000008248ELAVL19533.553
ENSTSYG00000006532PABPC45876.650ENSTSYG00000001775-9976.650
ENSTSYG00000006532PABPC49767.476ENSTSYG00000006645PABPC1L9867.476
ENSTSYG00000006532PABPC47076.923ENSTSYG00000033737-9077.201
ENSTSYG00000006532PABPC45934.940ENSTSYG00000013066ELAVL28734.940
ENSTSYG00000006532PABPC49967.707ENSTSYG00000037130-9278.820
ENSTSYG00000006532PABPC45730.769ENSTSYG00000004348TIAL17930.220
ENSTSYG00000006532PABPC45938.750ENSTSYG00000014755RBM236239.241
ENSTSYG00000006532PABPC45730.370ENSTSYG00000005276TIA18530.189
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTSYG00000006532PABPC410099.394ENSG00000090621PABPC4100100.000Homo_sapiens
ENSTSYG00000006532PABPC49983.360ENSAPOG00000001161pabpc410083.594Acanthochromis_polyacanthus
ENSTSYG00000006532PABPC49857.556ENSAMEG00000015083-9957.556Ailuropoda_melanoleuca
ENSTSYG00000006532PABPC410098.939ENSAMEG00000011535-10098.939Ailuropoda_melanoleuca
ENSTSYG00000006532PABPC410083.594ENSACIG00000023343pabpc410084.219Amphilophus_citrinellus
ENSTSYG00000006532PABPC49983.518ENSAOCG00000021529pabpc410083.750Amphiprion_ocellaris
ENSTSYG00000006532PABPC49983.518ENSAPEG00000019196pabpc410083.750Amphiprion_percula
ENSTSYG00000006532PABPC49982.622ENSATEG00000007402pabpc410083.151Anabas_testudineus
ENSTSYG00000006532PABPC49991.429ENSAPLG00000009729-10091.429Anas_platyrhynchos
ENSTSYG00000006532PABPC49990.161ENSACAG00000002544PABPC410090.161Anolis_carolinensis
ENSTSYG00000006532PABPC410099.242ENSANAG00000025079PABPC410099.242Aotus_nancymaae
ENSTSYG00000006532PABPC410083.125ENSACLG00000019558pabpc410083.750Astatotilapia_calliptera
ENSTSYG00000006532PABPC49978.922ENSAMXG00000018779pabpc49979.715Astyanax_mexicanus
ENSTSYG00000006532PABPC45786.826ENSBTAG00000048536-9886.826Bos_taurus
ENSTSYG00000006532PABPC410096.520ENSBTAG00000017125PABPC410096.520Bos_taurus
ENSTSYG00000006532PABPC410099.394ENSCJAG00000002512-10099.394Callithrix_jacchus
ENSTSYG00000006532PABPC47789.754ENSCJAG00000045953-9389.754Callithrix_jacchus
ENSTSYG00000006532PABPC410099.208ENSCAFG00000003081PABPC410099.208Canis_familiaris
ENSTSYG00000006532PABPC410099.091ENSCAFG00020004161PABPC410099.091Canis_lupus_dingo
ENSTSYG00000006532PABPC410098.939ENSCHIG00000019398-10098.939Capra_hircus
ENSTSYG00000006532PABPC410076.667ENSCHIG00000023385-10076.667Capra_hircus
ENSTSYG00000006532PABPC49999.088ENSCAPG00000015984PABPC410099.088Cavia_aperea
ENSTSYG00000006532PABPC410099.091ENSCPOG00000009552PABPC410099.091Cavia_porcellus
ENSTSYG00000006532PABPC410099.242ENSCCAG00000037306PABPC410099.242Cebus_capucinus
ENSTSYG00000006532PABPC410099.545ENSCATG00000042164PABPC410099.545Cercocebus_atys
ENSTSYG00000006532PABPC410099.091ENSCLAG00000011899PABPC410099.091Chinchilla_lanigera
ENSTSYG00000006532PABPC410099.545ENSCSAG00000001135PABPC410099.545Chlorocebus_sabaeus
ENSTSYG00000006532PABPC48697.889ENSCHOG00000005327PABPC48197.889Choloepus_hoffmanni
ENSTSYG00000006532PABPC49991.746ENSCPBG00000001038PABPC410091.746Chrysemys_picta_bellii
ENSTSYG00000006532PABPC49999.386ENSCANG00000034177PABPC410099.386Colobus_angolensis_palliatus
ENSTSYG00000006532PABPC410097.590ENSCGRG00001018166Pabpc410097.590Cricetulus_griseus_chok1gshd
ENSTSYG00000006532PABPC49995.115ENSCGRG00000009777Pabpc410095.115Cricetulus_griseus_crigri
ENSTSYG00000006532PABPC410082.344ENSCSEG00000000130pabpc410082.969Cynoglossus_semilaevis
ENSTSYG00000006532PABPC49983.625ENSCVAG00000019246pabpc410084.261Cyprinodon_variegatus
ENSTSYG00000006532PABPC49984.921ENSDARG00000059259pabpc410085.691Danio_rerio
ENSTSYG00000006532PABPC49999.464ENSDNOG00000018444-10099.464Dasypus_novemcinctus
ENSTSYG00000006532PABPC410096.818ENSDORG00000011581Pabpc410096.818Dipodomys_ordii
ENSTSYG00000006532PABPC48665.185ENSETEG00000009172-9965.201Echinops_telfairi
ENSTSYG00000006532PABPC4100100.000ENSETEG00000018453-84100.000Echinops_telfairi
ENSTSYG00000006532PABPC49776.898ENSEBUG00000013782pabpc49976.582Eptatretus_burgeri
ENSTSYG00000006532PABPC49976.582ENSEBUG00000000992pabpc410080.346Eptatretus_burgeri
ENSTSYG00000006532PABPC410099.545ENSEASG00005014119PABPC410099.545Equus_asinus_asinus
ENSTSYG00000006532PABPC410099.545ENSECAG00000009396PABPC410099.545Equus_caballus
ENSTSYG00000006532PABPC410096.364ENSEEUG00000002962PABPC410096.364Erinaceus_europaeus
ENSTSYG00000006532PABPC49983.599ENSELUG00000003195pabpc49884.177Esox_lucius
ENSTSYG00000006532PABPC410099.242ENSFCAG00000015254-10099.242Felis_catus
ENSTSYG00000006532PABPC49990.952ENSFALG00000000543PABPC410090.952Ficedula_albicollis
ENSTSYG00000006532PABPC49067.284ENSFDAG00000010581-10063.193Fukomys_damarensis
ENSTSYG00000006532PABPC410099.394ENSFDAG00000020016-10099.394Fukomys_damarensis
ENSTSYG00000006532PABPC410083.412ENSFHEG00000007548pabpc410084.038Fundulus_heteroclitus
ENSTSYG00000006532PABPC49982.808ENSGMOG00000019025pabpc49983.438Gadus_morhua
ENSTSYG00000006532PABPC49991.746ENSGALG00000003800PABPC410091.746Gallus_gallus
ENSTSYG00000006532PABPC49990.566ENSGAFG00000018195pabpc49895.556Gambusia_affinis
ENSTSYG00000006532PABPC410081.591ENSGACG00000007179pabpc410082.215Gasterosteus_aculeatus
ENSTSYG00000006532PABPC49991.587ENSGAGG00000001888PABPC410091.587Gopherus_agassizii
ENSTSYG00000006532PABPC410099.394ENSGGOG00000004002PABPC410099.394Gorilla_gorilla
ENSTSYG00000006532PABPC410083.281ENSHBUG00000020206pabpc410083.906Haplochromis_burtoni
ENSTSYG00000006532PABPC410099.545ENSHGLG00000011162PABPC410099.545Heterocephalus_glaber_female
ENSTSYG00000006532PABPC410099.525ENSHGLG00100001580PABPC410099.525Heterocephalus_glaber_male
ENSTSYG00000006532PABPC410082.316ENSHCOG00000012694pabpc410082.942Hippocampus_comes
ENSTSYG00000006532PABPC49883.307ENSIPUG00000016620pabpc49983.333Ictalurus_punctatus
ENSTSYG00000006532PABPC410096.970ENSSTOG00000010416PABPC410096.970Ictidomys_tridecemlineatus
ENSTSYG00000006532PABPC410094.848ENSJJAG00000007781Pabpc410094.848Jaculus_jaculus
ENSTSYG00000006532PABPC49982.677ENSKMAG00000013597pabpc49983.307Kryptolebias_marmoratus
ENSTSYG00000006532PABPC410082.582ENSLBEG00000013654pabpc410083.204Labrus_bergylta
ENSTSYG00000006532PABPC49988.013ENSLACG00000011907PABPC410088.013Latimeria_chalumnae
ENSTSYG00000006532PABPC49985.512ENSLOCG00000001877pabpc49986.299Lepisosteus_oculatus
ENSTSYG00000006532PABPC410099.091ENSLAFG00000000151PABPC410099.091Loxodonta_africana
ENSTSYG00000006532PABPC410099.545ENSMFAG00000041481PABPC410099.545Macaca_fascicularis
ENSTSYG00000006532PABPC410099.545ENSMMUG00000007497PABPC410099.545Macaca_mulatta
ENSTSYG00000006532PABPC410099.394ENSMNEG00000043054PABPC410099.394Macaca_nemestrina
ENSTSYG00000006532PABPC410099.545ENSMLEG00000040716PABPC410099.545Mandrillus_leucophaeus
ENSTSYG00000006532PABPC49983.201ENSMAMG00000010025pabpc49983.491Mastacembelus_armatus
ENSTSYG00000006532PABPC410091.076ENSMZEG00005006141pabpc410083.594Maylandia_zebra
ENSTSYG00000006532PABPC49987.905ENSMGAG00000005408PABPC410087.905Meleagris_gallopavo
ENSTSYG00000006532PABPC45781.287ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSTSYG00000006532PABPC47289.423ENSMAUG00000001295-9789.423Mesocricetus_auratus
ENSTSYG00000006532PABPC47795.413ENSMAUG00000019763-8495.413Mesocricetus_auratus
ENSTSYG00000006532PABPC48996.441ENSMICG00000016633-9799.574Microcebus_murinus
ENSTSYG00000006532PABPC49981.528ENSMICG00000036729-10085.613Microcebus_murinus
ENSTSYG00000006532PABPC410097.590ENSMOCG00000006763Pabpc410097.590Microtus_ochrogaster
ENSTSYG00000006532PABPC410080.346ENSMMOG00000002363pabpc49981.319Mola_mola
ENSTSYG00000006532PABPC49889.352ENSMODG00000017657-10088.939Monodelphis_domestica
ENSTSYG00000006532PABPC45974.011ENSMODG00000018051-9174.011Monodelphis_domestica
ENSTSYG00000006532PABPC49982.780ENSMALG00000011017pabpc410083.022Monopterus_albus
ENSTSYG00000006532PABPC49983.729MGP_CAROLIEiJ_G0024864-10083.729Mus_caroli
ENSTSYG00000006532PABPC410097.273MGP_CAROLIEiJ_G0026435-10099.291Mus_caroli
ENSTSYG00000006532PABPC410097.727ENSMUSG00000011257Pabpc410099.405Mus_musculus
ENSTSYG00000006532PABPC49997.389MGP_PahariEiJ_G0028765Pabpc4100100.000Mus_pahari
ENSTSYG00000006532PABPC49978.455MGP_SPRETEiJ_G0027415Pabpc410099.291Mus_spretus
ENSTSYG00000006532PABPC410099.242ENSMPUG00000014414-10099.242Mustela_putorius_furo
ENSTSYG00000006532PABPC49553.477ENSMPUG00000006836-10053.477Mustela_putorius_furo
ENSTSYG00000006532PABPC410096.513ENSMLUG00000012068PABPC410096.513Myotis_lucifugus
ENSTSYG00000006532PABPC410096.515ENSNGAG00000018292Pabpc410096.515Nannospalax_galili
ENSTSYG00000006532PABPC45992.788ENSNBRG00000009708pabpc49892.788Neolamprologus_brichardi
ENSTSYG00000006532PABPC46786.441ENSNBRG00000010047-7586.441Neolamprologus_brichardi
ENSTSYG00000006532PABPC410099.525ENSNLEG00000011928PABPC410099.525Nomascus_leucogenys
ENSTSYG00000006532PABPC48598.947ENSOPRG00000011984PABPC48798.947Ochotona_princeps
ENSTSYG00000006532PABPC45385.714ENSODEG00000013457-10085.714Octodon_degus
ENSTSYG00000006532PABPC49989.733ENSODEG00000017434-10089.733Octodon_degus
ENSTSYG00000006532PABPC410098.788ENSODEG00000006592-10098.788Octodon_degus
ENSTSYG00000006532PABPC410083.281ENSONIG00000008176pabpc410083.906Oreochromis_niloticus
ENSTSYG00000006532PABPC49991.270ENSOANG00000010001PABPC410091.270Ornithorhynchus_anatinus
ENSTSYG00000006532PABPC49699.209ENSOCUG00000000562PABPC48899.209Oryctolagus_cuniculus
ENSTSYG00000006532PABPC49991.049ENSORLG00000017479pabpc49991.049Oryzias_latipes
ENSTSYG00000006532PABPC49991.049ENSORLG00020018644pabpc49991.049Oryzias_latipes_hni
ENSTSYG00000006532PABPC49991.049ENSORLG00015015042pabpc49991.049Oryzias_latipes_hsok
ENSTSYG00000006532PABPC49983.201ENSOMEG00000014410pabpc49983.648Oryzias_melastigma
ENSTSYG00000006532PABPC410096.833ENSOGAG00000004067PABPC410096.833Otolemur_garnettii
ENSTSYG00000006532PABPC410098.939ENSOARG00000020060PABPC410098.939Ovis_aries
ENSTSYG00000006532PABPC410099.394ENSPPAG00000043625PABPC410099.394Pan_paniscus
ENSTSYG00000006532PABPC410099.242ENSPPRG00000024727PABPC410099.242Panthera_pardus
ENSTSYG00000006532PABPC410099.242ENSPTIG00000005829PABPC410099.242Panthera_tigris_altaica
ENSTSYG00000006532PABPC410099.394ENSPTRG00000000573PABPC410099.394Pan_troglodytes
ENSTSYG00000006532PABPC410099.394ENSPANG00000009484PABPC410099.394Papio_anubis
ENSTSYG00000006532PABPC49984.810ENSPKIG00000025356pabpc49985.443Paramormyrops_kingsleyae
ENSTSYG00000006532PABPC49991.746ENSPSIG00000016892PABPC410091.746Pelodiscus_sinensis
ENSTSYG00000006532PABPC410081.417ENSPMGG00000009073pabpc49981.417Periophthalmus_magnuspinnatus
ENSTSYG00000006532PABPC410097.121ENSPEMG00000023569-9997.121Peromyscus_maniculatus_bairdii
ENSTSYG00000006532PABPC410090.909ENSPEMG00000024193-9990.909Peromyscus_maniculatus_bairdii
ENSTSYG00000006532PABPC49571.311ENSPMAG00000007885pabpc410071.173Petromyzon_marinus
ENSTSYG00000006532PABPC48973.484ENSPMAG00000002836pabpc410074.350Petromyzon_marinus
ENSTSYG00000006532PABPC49794.033ENSPCIG00000020674PABPC410094.033Phascolarctos_cinereus
ENSTSYG00000006532PABPC410082.629ENSPFOG00000002682pabpc410083.725Poecilia_formosa
ENSTSYG00000006532PABPC410082.629ENSPLAG00000010112pabpc410083.725Poecilia_latipinna
ENSTSYG00000006532PABPC49983.148ENSPMEG00000019739pabpc410083.881Poecilia_mexicana
ENSTSYG00000006532PABPC410083.099ENSPREG00000001589pabpc410083.725Poecilia_reticulata
ENSTSYG00000006532PABPC410099.394ENSPPYG00000001506PABPC410099.394Pongo_abelii
ENSTSYG00000006532PABPC410094.242ENSPCAG00000003341PABPC410094.242Procavia_capensis
ENSTSYG00000006532PABPC410099.546ENSPCOG00000023725-10099.546Propithecus_coquereli
ENSTSYG00000006532PABPC49982.003ENSPCOG00000025882-9594.059Propithecus_coquereli
ENSTSYG00000006532PABPC49998.655ENSPVAG00000002187PABPC410098.655Pteropus_vampyrus
ENSTSYG00000006532PABPC410083.125ENSPNYG00000006134pabpc410083.750Pundamilia_nyererei
ENSTSYG00000006532PABPC410083.725ENSPNAG00000024355pabpc410084.351Pygocentrus_nattereri
ENSTSYG00000006532PABPC410095.758ENSRNOG00000015642Pabpc410095.758Rattus_norvegicus
ENSTSYG00000006532PABPC410093.636ENSRNOG00000028592AABR07035074.110093.636Rattus_norvegicus
ENSTSYG00000006532PABPC410099.545ENSRBIG00000039761PABPC410099.545Rhinopithecus_bieti
ENSTSYG00000006532PABPC410099.545ENSRROG00000033355PABPC410099.545Rhinopithecus_roxellana
ENSTSYG00000006532PABPC410099.091ENSSBOG00000026193PABPC410099.091Saimiri_boliviensis_boliviensis
ENSTSYG00000006532PABPC49892.718ENSSHAG00000018139PABPC410092.222Sarcophilus_harrisii
ENSTSYG00000006532PABPC49985.714ENSSFOG00015023514pabpc49985.714Scleropages_formosus
ENSTSYG00000006532PABPC49982.437ENSSMAG00000009007pabpc49983.386Scophthalmus_maximus
ENSTSYG00000006532PABPC49982.726ENSSDUG00000012683pabpc410088.046Seriola_dumerili
ENSTSYG00000006532PABPC49982.726ENSSLDG00000013025pabpc410082.969Seriola_lalandi_dorsalis
ENSTSYG00000006532PABPC410091.970ENSSARG00000000310PABPC410091.970Sorex_araneus
ENSTSYG00000006532PABPC49990.000ENSSPUG00000003204PABPC410090.000Sphenodon_punctatus
ENSTSYG00000006532PABPC49990.562ENSSPAG00000009252pabpc49983.176Stegastes_partitus
ENSTSYG00000006532PABPC410099.091ENSSSCG00000003660-10099.091Sus_scrofa
ENSTSYG00000006532PABPC48950.505ENSSSCG00000036170-9650.505Sus_scrofa
ENSTSYG00000006532PABPC49987.595ENSTGUG00000001266PABPC410087.595Taeniopygia_guttata
ENSTSYG00000006532PABPC410082.075ENSTRUG00000005907pabpc49982.704Takifugu_rubripes
ENSTSYG00000006532PABPC410078.213ENSTNIG00000016902pabpc49978.213Tetraodon_nigroviridis
ENSTSYG00000006532PABPC49988.571ENSTBEG00000009035PABPC410088.571Tupaia_belangeri
ENSTSYG00000006532PABPC49983.142ENSTTRG00000014340PABPC410086.891Tursiops_truncatus
ENSTSYG00000006532PABPC410099.366ENSUAMG00000000303PABPC410099.366Ursus_americanus
ENSTSYG00000006532PABPC410098.939ENSUMAG00000019585PABPC410099.057Ursus_maritimus
ENSTSYG00000006532PABPC48496.454ENSVPAG00000010041PABPC47796.454Vicugna_pacos
ENSTSYG00000006532PABPC410099.208ENSVVUG00000005215PABPC410099.208Vulpes_vulpes
ENSTSYG00000006532PABPC49983.333ENSXETG00000010946pabpc410083.333Xenopus_tropicalis
ENSTSYG00000006532PABPC46197.024ENSXETG00000027221-10097.024Xenopus_tropicalis
ENSTSYG00000006532PABPC49989.351ENSXCOG00000013190pabpc49690.094Xiphophorus_couchianus
ENSTSYG00000006532PABPC410082.942ENSXMAG00000019007pabpc410083.568Xiphophorus_maculatus

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