EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTSYG00000006782 (Gene tree)
Gene ID: 103264496
Gene Symbol: SRRM1
Alias: MGC39488|POP101|SRM160
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Plus strand
Length: 28883 bases
Position: chrKE941334.1:819345-848227
Accession: 103264496
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000020327	PWI	PF01480.17	6.6e-30	1	1
ENSTSYP00000023817	PWI	PF01480.17	7.1e-30	1	1
ENSTSYP00000006262	PWI	PF01480.17	7.1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000033336	SRRM1-203	2595	-	ENSTSYP00000020327	864 (aa)	-	UPI000C2F7A09
ENSTSYT00000025846	SRRM1-202	2715	-	ENSTSYP00000023817	904 (aa)	XP_021570173	UPI000B53877B
ENSTSYT00000006841	SRRM1-201	2742	XM_008062171	ENSTSYP00000006262	913 (aa)	XP_008060362	UPI000C2F62DE

Gene Model

Click here to download ENSTSYG00000006782's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000006782's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000006782	SRRM1	100	98.357	ENSG00000133226	SRRM1	100	100.000	Homo_sapiens
ENSTSYG00000006782	SRRM1	100	98.028	ENSAMEG00000010075	SRRM1	100	98.028	Ailuropoda_melanoleuca
ENSTSYG00000006782	SRRM1	100	97.898	ENSANAG00000035606	SRRM1	100	97.898	Aotus_nancymaae
ENSTSYG00000006782	SRRM1	100	97.456	ENSBTAG00000013772	SRRM1	100	97.456	Bos_taurus
ENSTSYG00000006782	SRRM1	100	97.590	ENSCJAG00000020822	SRRM1	100	97.590	Callithrix_jacchus
ENSTSYG00000006782	SRRM1	100	97.898	ENSCAFG00020020948	SRRM1	100	97.898	Canis_lupus_dingo
ENSTSYG00000006782	SRRM1	100	96.288	ENSCHIG00000014656	SRRM1	100	96.288	Capra_hircus
ENSTSYG00000006782	SRRM1	99	94.537	ENSCAPG00000011473	SRRM1	100	94.537	Cavia_aperea
ENSTSYG00000006782	SRRM1	100	95.465	ENSCPOG00000015594	SRRM1	100	95.465	Cavia_porcellus
ENSTSYG00000006782	SRRM1	100	97.700	ENSCCAG00000029474	SRRM1	100	97.700	Cebus_capucinus
ENSTSYG00000006782	SRRM1	100	98.009	ENSCATG00000031303	SRRM1	100	98.009	Cercocebus_atys
ENSTSYG00000006782	SRRM1	100	96.350	ENSCLAG00000014592	SRRM1	100	96.350	Chinchilla_lanigera
ENSTSYG00000006782	SRRM1	74	97.222	ENSCHOG00000000027	SRRM1	71	98.592	Choloepus_hoffmanni
ENSTSYG00000006782	SRRM1	100	98.028	ENSCANG00000028271	SRRM1	100	98.028	Colobus_angolensis_palliatus
ENSTSYG00000006782	SRRM1	98	91.444	ENSDNOG00000049141	SRRM1	99	91.444	Dasypus_novemcinctus
ENSTSYG00000006782	SRRM1	100	96.841	ENSEASG00005004270	SRRM1	100	96.841	Equus_asinus_asinus
ENSTSYG00000006782	SRRM1	100	97.566	ENSECAG00000026981	SRRM1	100	97.566	Equus_caballus
ENSTSYG00000006782	SRRM1	100	98.230	ENSFCAG00000000678	-	100	98.230	Felis_catus
ENSTSYG00000006782	SRRM1	100	96.903	ENSFDAG00000009903	SRRM1	100	96.903	Fukomys_damarensis
ENSTSYG00000006782	SRRM1	100	98.248	ENSGGOG00000005209	SRRM1	100	98.248	Gorilla_gorilla
ENSTSYG00000006782	SRRM1	100	96.903	ENSHGLG00000017105	SRRM1	100	96.903	Heterocephalus_glaber_female
ENSTSYG00000006782	SRRM1	99	96.444	ENSHGLG00100016772	SRRM1	99	96.444	Heterocephalus_glaber_male
ENSTSYG00000006782	SRRM1	100	98.230	ENSSTOG00000014640	SRRM1	100	98.230	Ictidomys_tridecemlineatus
ENSTSYG00000006782	SRRM1	100	94.168	ENSLAFG00000013830	SRRM1	100	94.168	Loxodonta_africana
ENSTSYG00000006782	SRRM1	100	98.009	ENSMFAG00000025726	SRRM1	100	98.009	Macaca_fascicularis
ENSTSYG00000006782	SRRM1	99	70.280	ENSMFAG00000038841	-	61	79.074	Macaca_fascicularis
ENSTSYG00000006782	SRRM1	57	79.477	ENSMMUG00000039269	-	59	78.873	Macaca_mulatta
ENSTSYG00000006782	SRRM1	100	97.898	ENSMMUG00000006645	SRRM1	100	97.898	Macaca_mulatta
ENSTSYG00000006782	SRRM1	100	98.009	ENSMNEG00000039415	SRRM1	100	98.009	Macaca_nemestrina
ENSTSYG00000006782	SRRM1	62	71.269	ENSMLEG00000032221	-	61	72.053	Mandrillus_leucophaeus
ENSTSYG00000006782	SRRM1	55	98.004	ENSMLEG00000038030	-	100	91.895	Mandrillus_leucophaeus
ENSTSYG00000006782	SRRM1	100	98.230	ENSMICG00000006553	SRRM1	100	98.230	Microcebus_murinus
ENSTSYG00000006782	SRRM1	100	98.357	ENSNLEG00000008966	SRRM1	100	98.357	Nomascus_leucogenys
ENSTSYG00000006782	SRRM1	72	96.250	ENSMEUG00000014704	SRRM1	70	95.789	Notamacropus_eugenii
ENSTSYG00000006782	SRRM1	100	96.725	ENSOCUG00000008438	SRRM1	100	96.725	Oryctolagus_cuniculus
ENSTSYG00000006782	SRRM1	100	96.514	ENSOGAG00000010210	SRRM1	100	96.514	Otolemur_garnettii
ENSTSYG00000006782	SRRM1	92	97.052	ENSOARG00000006453	SRRM1	99	97.052	Ovis_aries
ENSTSYG00000006782	SRRM1	100	98.248	ENSPPAG00000043918	SRRM1	100	98.248	Pan_paniscus
ENSTSYG00000006782	SRRM1	100	98.230	ENSPPRG00000002509	SRRM1	100	98.230	Panthera_pardus
ENSTSYG00000006782	SRRM1	100	94.444	ENSPTIG00000008778	-	100	94.444	Panthera_tigris_altaica
ENSTSYG00000006782	SRRM1	100	98.341	ENSPTRG00000000349	SRRM1	100	98.341	Pan_troglodytes
ENSTSYG00000006782	SRRM1	100	97.363	ENSPANG00000010194	SRRM1	100	97.363	Papio_anubis
ENSTSYG00000006782	SRRM1	99	66.325	ENSPANG00000035568	-	59	76.815	Papio_anubis
ENSTSYG00000006782	SRRM1	57	97.166	ENSPCIG00000009214	SRRM1	60	84.250	Phascolarctos_cinereus
ENSTSYG00000006782	SRRM1	100	98.031	ENSPPYG00000001716	SRRM1	100	98.031	Pongo_abelii
ENSTSYG00000006782	SRRM1	55	100.000	ENSPCAG00000015138	SRRM1	52	100.000	Procavia_capensis
ENSTSYG00000006782	SRRM1	100	98.031	ENSPCOG00000021311	SRRM1	100	98.031	Propithecus_coquereli
ENSTSYG00000006782	SRRM1	100	97.919	ENSPVAG00000005836	SRRM1	100	97.919	Pteropus_vampyrus
ENSTSYG00000006782	SRRM1	99	91.667	ENSRBIG00000035461	SRRM1	99	91.667	Rhinopithecus_bieti
ENSTSYG00000006782	SRRM1	100	98.028	ENSRROG00000035151	SRRM1	100	98.028	Rhinopithecus_roxellana
ENSTSYG00000006782	SRRM1	100	96.714	ENSSBOG00000019884	SRRM1	99	100.000	Saimiri_boliviensis_boliviensis
ENSTSYG00000006782	SRRM1	70	94.737	ENSSARG00000013718	SRRM1	60	94.426	Sorex_araneus
ENSTSYG00000006782	SRRM1	62	71.821	ENSSPUG00000015890	SRRM1	57	83.026	Sphenodon_punctatus
ENSTSYG00000006782	SRRM1	99	97.146	ENSSSCG00000032947	SRRM1	100	97.564	Sus_scrofa
ENSTSYG00000006782	SRRM1	100	97.590	ENSTBEG00000000100	SRRM1	100	97.590	Tupaia_belangeri
ENSTSYG00000006782	SRRM1	99	97.461	ENSTTRG00000009365	SRRM1	100	97.461	Tursiops_truncatus
ENSTSYG00000006782	SRRM1	88	98.496	ENSUMAG00000013121	SRRM1	95	98.496	Ursus_maritimus
ENSTSYG00000006782	SRRM1	96	95.553	ENSVPAG00000007698	SRRM1	100	95.553	Vicugna_pacos
ENSTSYG00000006782	SRRM1	100	95.023	ENSVVUG00000026966	SRRM1	100	95.023	Vulpes_vulpes