EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTSYG00000008027 (Gene tree)
Gene ID: 103249427
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Plus strand
Length: 32100 bases
Position: chrKE928965.1:374221-406320
Accession: 103249427
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000007462	CPSF_A	PF03178.15	1.7e-83	1	1
ENSTSYP00000017978	CPSF_A	PF03178.15	1e-80	1	1
ENSTSYP00000033001	CPSF_A	PF03178.15	1.1e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000047663	DDB1-202	3318	-	ENSTSYP00000033001	1105 (aa)	-	UPI000C2F3DAD
ENSTSYT00000008133	DDB1-201	3417	XM_008048062	ENSTSYP00000007462	1138 (aa)	XP_008046253	UPI000C2F3CC8
ENSTSYT00000027652	DDB1-203	3279	-	ENSTSYP00000017978	1092 (aa)	-	UPI000C2F627E

Gene Model

Click here to download ENSTSYG00000008027's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000008027's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000008027	DDB1	100	99.123	ENSG00000167986	DDB1	100	100.000	Homo_sapiens
ENSTSYG00000008027	DDB1	98	91.015	ENSAPOG00000005036	ddb1	99	91.020	Acanthochromis_polyacanthus
ENSTSYG00000008027	DDB1	100	99.211	ENSAMEG00000016518	DDB1	100	99.211	Ailuropoda_melanoleuca
ENSTSYG00000008027	DDB1	86	91.327	ENSACIG00000020624	ddb1	99	91.327	Amphilophus_citrinellus
ENSTSYG00000008027	DDB1	100	90.702	ENSAOCG00000003066	ddb1	100	90.702	Amphiprion_ocellaris
ENSTSYG00000008027	DDB1	100	90.789	ENSAPEG00000000092	ddb1	100	90.789	Amphiprion_percula
ENSTSYG00000008027	DDB1	94	91.256	ENSATEG00000020571	ddb1	97	91.256	Anabas_testudineus
ENSTSYG00000008027	DDB1	98	96.089	ENSAPLG00000007174	DDB1	99	96.089	Anas_platyrhynchos
ENSTSYG00000008027	DDB1	100	96.667	ENSACAG00000017758	DDB1	100	96.667	Anolis_carolinensis
ENSTSYG00000008027	DDB1	100	99.123	ENSANAG00000021878	DDB1	100	99.123	Aotus_nancymaae
ENSTSYG00000008027	DDB1	100	91.053	ENSACLG00000012401	ddb1	100	91.053	Astatotilapia_calliptera
ENSTSYG00000008027	DDB1	100	99.035	ENSBTAG00000021569	DDB1	93	99.035	Bos_taurus
ENSTSYG00000008027	DDB1	100	36.955	WBGene00010890	ddb-1	100	36.869	Caenorhabditis_elegans
ENSTSYG00000008027	DDB1	100	99.123	ENSCJAG00000019319	DDB1	100	99.123	Callithrix_jacchus
ENSTSYG00000008027	DDB1	100	99.211	ENSCAFG00000016264	DDB1	100	99.211	Canis_familiaris
ENSTSYG00000008027	DDB1	94	98.884	ENSCAFG00020012722	DDB1	99	98.884	Canis_lupus_dingo
ENSTSYG00000008027	DDB1	100	99.035	ENSCHIG00000014969	DDB1	100	99.035	Capra_hircus
ENSTSYG00000008027	DDB1	98	98.749	ENSCAPG00000010786	DDB1	100	98.749	Cavia_aperea
ENSTSYG00000008027	DDB1	100	98.684	ENSCPOG00000009956	DDB1	100	98.684	Cavia_porcellus
ENSTSYG00000008027	DDB1	100	99.123	ENSCCAG00000035883	DDB1	100	99.123	Cebus_capucinus
ENSTSYG00000008027	DDB1	100	96.615	ENSCATG00000044495	DDB1	100	96.615	Cercocebus_atys
ENSTSYG00000008027	DDB1	100	98.860	ENSCLAG00000004126	DDB1	100	98.860	Chinchilla_lanigera
ENSTSYG00000008027	DDB1	100	99.123	ENSCSAG00000006392	DDB1	100	99.123	Chlorocebus_sabaeus
ENSTSYG00000008027	DDB1	88	92.235	ENSCHOG00000011377	DDB1	90	92.235	Choloepus_hoffmanni
ENSTSYG00000008027	DDB1	100	97.368	ENSCPBG00000017728	DDB1	100	97.368	Chrysemys_picta_bellii
ENSTSYG00000008027	DDB1	100	61.892	ENSCING00000007437	-	100	61.806	Ciona_intestinalis
ENSTSYG00000008027	DDB1	94	60.369	ENSCSAVG00000004783	-	100	60.369	Ciona_savignyi
ENSTSYG00000008027	DDB1	100	99.123	ENSCANG00000019948	DDB1	100	99.123	Colobus_angolensis_palliatus
ENSTSYG00000008027	DDB1	100	99.298	ENSCGRG00001016599	Ddb1	100	99.298	Cricetulus_griseus_chok1gshd
ENSTSYG00000008027	DDB1	100	99.298	ENSCGRG00000013427	Ddb1	100	99.298	Cricetulus_griseus_crigri
ENSTSYG00000008027	DDB1	93	90.763	ENSCSEG00000012499	ddb1	99	89.170	Cynoglossus_semilaevis
ENSTSYG00000008027	DDB1	94	90.960	ENSCVAG00000019531	ddb1	99	90.960	Cyprinodon_variegatus
ENSTSYG00000008027	DDB1	100	88.091	ENSDARG00000074431	ddb1	100	88.091	Danio_rerio
ENSTSYG00000008027	DDB1	94	98.698	ENSDNOG00000014884	DDB1	97	98.698	Dasypus_novemcinctus
ENSTSYG00000008027	DDB1	84	99.548	ENSDORG00000000127	Ddb1	100	99.548	Dipodomys_ordii
ENSTSYG00000008027	DDB1	100	60.786	FBgn0260962	pic	100	60.577	Drosophila_melanogaster
ENSTSYG00000008027	DDB1	71	99.606	ENSETEG00000001053	-	71	99.606	Echinops_telfairi
ENSTSYG00000008027	DDB1	78	84.589	ENSEBUG00000014593	ddb1	97	84.589	Eptatretus_burgeri
ENSTSYG00000008027	DDB1	100	99.035	ENSEASG00005008184	DDB1	100	99.035	Equus_asinus_asinus
ENSTSYG00000008027	DDB1	100	98.947	ENSECAG00000012136	DDB1	100	98.947	Equus_caballus
ENSTSYG00000008027	DDB1	85	96.633	ENSEEUG00000003194	DDB1	85	96.633	Erinaceus_europaeus
ENSTSYG00000008027	DDB1	100	90.614	ENSELUG00000023868	ddb1	100	90.614	Esox_lucius
ENSTSYG00000008027	DDB1	100	99.211	ENSFCAG00000029716	DDB1	100	99.211	Felis_catus
ENSTSYG00000008027	DDB1	100	96.413	ENSFALG00000011981	DDB1	100	96.413	Ficedula_albicollis
ENSTSYG00000008027	DDB1	100	98.947	ENSFDAG00000005128	DDB1	100	98.947	Fukomys_damarensis
ENSTSYG00000008027	DDB1	90	92.800	ENSFHEG00000022133	ddb1	98	92.800	Fundulus_heteroclitus
ENSTSYG00000008027	DDB1	79	94.314	ENSGMOG00000019386	ddb1	94	94.314	Gadus_morhua
ENSTSYG00000008027	DDB1	100	96.579	ENSGALG00000042333	DDB1	100	96.579	Gallus_gallus
ENSTSYG00000008027	DDB1	94	90.774	ENSGAFG00000013142	ddb1	99	90.774	Gambusia_affinis
ENSTSYG00000008027	DDB1	96	90.192	ENSGACG00000017182	ddb1	100	90.192	Gasterosteus_aculeatus
ENSTSYG00000008027	DDB1	95	97.325	ENSGAGG00000014124	DDB1	100	97.325	Gopherus_agassizii
ENSTSYG00000008027	DDB1	100	99.123	ENSGGOG00000004052	DDB1	100	99.123	Gorilla_gorilla
ENSTSYG00000008027	DDB1	100	91.053	ENSHBUG00000008873	ddb1	100	91.053	Haplochromis_burtoni
ENSTSYG00000008027	DDB1	100	98.684	ENSHGLG00000018430	DDB1	100	98.684	Heterocephalus_glaber_female
ENSTSYG00000008027	DDB1	100	97.632	ENSHGLG00100014475	DDB1	100	97.632	Heterocephalus_glaber_male
ENSTSYG00000008027	DDB1	94	90.520	ENSHCOG00000018670	ddb1	98	90.520	Hippocampus_comes
ENSTSYG00000008027	DDB1	100	90.263	ENSIPUG00000005612	DDB1	100	90.263	Ictalurus_punctatus
ENSTSYG00000008027	DDB1	100	99.211	ENSSTOG00000007552	DDB1	100	99.211	Ictidomys_tridecemlineatus
ENSTSYG00000008027	DDB1	100	98.947	ENSJJAG00000017769	Ddb1	100	98.947	Jaculus_jaculus
ENSTSYG00000008027	DDB1	94	90.960	ENSKMAG00000002315	ddb1	99	90.960	Kryptolebias_marmoratus
ENSTSYG00000008027	DDB1	85	91.088	ENSLBEG00000017065	ddb1	99	91.088	Labrus_bergylta
ENSTSYG00000008027	DDB1	100	93.170	ENSLACG00000017611	DDB1	100	93.170	Latimeria_chalumnae
ENSTSYG00000008027	DDB1	92	82.540	ENSLOCG00000000012	ddb1	100	82.540	Lepisosteus_oculatus
ENSTSYG00000008027	DDB1	100	98.947	ENSLAFG00000011513	DDB1	100	98.947	Loxodonta_africana
ENSTSYG00000008027	DDB1	100	99.123	ENSMFAG00000042035	DDB1	100	99.123	Macaca_fascicularis
ENSTSYG00000008027	DDB1	99	99.116	ENSMMUG00000002691	DDB1	100	98.936	Macaca_mulatta
ENSTSYG00000008027	DDB1	100	99.123	ENSMNEG00000031559	DDB1	100	99.123	Macaca_nemestrina
ENSTSYG00000008027	DDB1	100	99.123	ENSMLEG00000044136	DDB1	100	99.123	Mandrillus_leucophaeus
ENSTSYG00000008027	DDB1	100	91.053	ENSMAMG00000014372	ddb1	100	91.053	Mastacembelus_armatus
ENSTSYG00000008027	DDB1	100	90.965	ENSMZEG00005013835	ddb1	100	90.965	Maylandia_zebra
ENSTSYG00000008027	DDB1	94	95.996	ENSMGAG00000004990	DDB1	100	95.996	Meleagris_gallopavo
ENSTSYG00000008027	DDB1	100	99.298	ENSMAUG00000012926	Ddb1	100	99.298	Mesocricetus_auratus
ENSTSYG00000008027	DDB1	100	99.123	ENSMICG00000013703	DDB1	100	99.123	Microcebus_murinus
ENSTSYG00000008027	DDB1	100	99.035	ENSMOCG00000020499	Ddb1	100	99.035	Microtus_ochrogaster
ENSTSYG00000008027	DDB1	86	91.122	ENSMMOG00000001758	ddb1	99	91.122	Mola_mola
ENSTSYG00000008027	DDB1	100	88.754	ENSMODG00000020353	DDB1	100	88.754	Monodelphis_domestica
ENSTSYG00000008027	DDB1	100	91.053	ENSMALG00000014071	ddb1	100	91.053	Monopterus_albus
ENSTSYG00000008027	DDB1	100	99.211	MGP_CAROLIEiJ_G0022695	Ddb1	100	99.211	Mus_caroli
ENSTSYG00000008027	DDB1	100	99.035	ENSMUSG00000024740	Ddb1	100	99.035	Mus_musculus
ENSTSYG00000008027	DDB1	100	99.211	MGP_PahariEiJ_G0014189	Ddb1	100	99.211	Mus_pahari
ENSTSYG00000008027	DDB1	100	99.123	MGP_SPRETEiJ_G0023609	Ddb1	100	99.123	Mus_spretus
ENSTSYG00000008027	DDB1	100	95.877	ENSMPUG00000014200	DDB1	100	95.877	Mustela_putorius_furo
ENSTSYG00000008027	DDB1	100	98.860	ENSMLUG00000013232	DDB1	100	98.860	Myotis_lucifugus
ENSTSYG00000008027	DDB1	100	98.947	ENSNGAG00000009384	Ddb1	100	98.947	Nannospalax_galili
ENSTSYG00000008027	DDB1	100	91.140	ENSNBRG00000019581	ddb1	100	91.140	Neolamprologus_brichardi
ENSTSYG00000008027	DDB1	100	96.007	ENSNLEG00000002022	DDB1	100	96.007	Nomascus_leucogenys
ENSTSYG00000008027	DDB1	90	99.296	ENSMEUG00000001099	DDB1	92	99.296	Notamacropus_eugenii
ENSTSYG00000008027	DDB1	90	90.495	ENSOPRG00000008254	DDB1	90	90.495	Ochotona_princeps
ENSTSYG00000008027	DDB1	100	98.684	ENSODEG00000002419	DDB1	100	98.684	Octodon_degus
ENSTSYG00000008027	DDB1	100	91.053	ENSONIG00000005804	ddb1	100	91.053	Oreochromis_niloticus
ENSTSYG00000008027	DDB1	91	97.674	ENSOANG00000004897	DDB1	100	97.674	Ornithorhynchus_anatinus
ENSTSYG00000008027	DDB1	100	99.123	ENSOCUG00000001667	DDB1	100	99.123	Oryctolagus_cuniculus
ENSTSYG00000008027	DDB1	96	89.551	ENSORLG00000001399	ddb1	98	90.778	Oryzias_latipes
ENSTSYG00000008027	DDB1	96	89.459	ENSORLG00020001277	ddb1	97	89.459	Oryzias_latipes_hni
ENSTSYG00000008027	DDB1	94	90.605	ENSORLG00015002080	ddb1	99	90.605	Oryzias_latipes_hsok
ENSTSYG00000008027	DDB1	96	89.426	ENSOMEG00000006181	ddb1	99	89.426	Oryzias_melastigma
ENSTSYG00000008027	DDB1	100	98.947	ENSOGAG00000016103	DDB1	100	98.947	Otolemur_garnettii
ENSTSYG00000008027	DDB1	99	99.020	ENSOARG00000011716	DDB1	98	99.020	Ovis_aries
ENSTSYG00000008027	DDB1	100	99.123	ENSPPAG00000035343	DDB1	100	99.123	Pan_paniscus
ENSTSYG00000008027	DDB1	100	99.211	ENSPPRG00000013300	DDB1	100	99.211	Panthera_pardus
ENSTSYG00000008027	DDB1	98	99.285	ENSPTIG00000006909	DDB1	98	99.285	Panthera_tigris_altaica
ENSTSYG00000008027	DDB1	100	99.123	ENSPTRG00000003737	DDB1	100	99.123	Pan_troglodytes
ENSTSYG00000008027	DDB1	100	99.123	ENSPANG00000000242	DDB1	100	99.123	Papio_anubis
ENSTSYG00000008027	DDB1	94	90.867	ENSPKIG00000019213	ddb1	94	90.867	Paramormyrops_kingsleyae
ENSTSYG00000008027	DDB1	98	96.619	ENSPSIG00000013275	DDB1	100	96.619	Pelodiscus_sinensis
ENSTSYG00000008027	DDB1	86	91.020	ENSPMGG00000021179	ddb1	99	91.020	Periophthalmus_magnuspinnatus
ENSTSYG00000008027	DDB1	100	99.298	ENSPEMG00000012241	Ddb1	100	99.298	Peromyscus_maniculatus_bairdii
ENSTSYG00000008027	DDB1	89	86.739	ENSPMAG00000008479	ddb1	100	86.739	Petromyzon_marinus
ENSTSYG00000008027	DDB1	100	98.772	ENSPCIG00000002643	DDB1	100	98.772	Phascolarctos_cinereus
ENSTSYG00000008027	DDB1	100	90.447	ENSPFOG00000002768	ddb1	100	90.447	Poecilia_formosa
ENSTSYG00000008027	DDB1	100	90.263	ENSPLAG00000017227	ddb1	100	90.263	Poecilia_latipinna
ENSTSYG00000008027	DDB1	100	90.263	ENSPMEG00000011398	ddb1	100	90.263	Poecilia_mexicana
ENSTSYG00000008027	DDB1	94	90.884	ENSPREG00000004440	ddb1	98	90.884	Poecilia_reticulata
ENSTSYG00000008027	DDB1	100	94.241	ENSPPYG00000003193	DDB1	100	94.241	Pongo_abelii
ENSTSYG00000008027	DDB1	85	98.955	ENSPCAG00000011040	DDB1	85	98.955	Procavia_capensis
ENSTSYG00000008027	DDB1	100	97.548	ENSPCOG00000015176	DDB1	100	97.548	Propithecus_coquereli
ENSTSYG00000008027	DDB1	100	99.035	ENSPVAG00000003847	DDB1	100	99.035	Pteropus_vampyrus
ENSTSYG00000008027	DDB1	94	90.960	ENSPNAG00000006635	ddb1	97	90.960	Pygocentrus_nattereri
ENSTSYG00000008027	DDB1	100	99.211	ENSRNOG00000020715	Ddb1	100	99.211	Rattus_norvegicus
ENSTSYG00000008027	DDB1	100	99.123	ENSRBIG00000033611	DDB1	100	99.123	Rhinopithecus_bieti
ENSTSYG00000008027	DDB1	100	99.123	ENSRROG00000041407	DDB1	100	99.123	Rhinopithecus_roxellana
ENSTSYG00000008027	DDB1	100	99.211	ENSSBOG00000019775	DDB1	100	99.211	Saimiri_boliviensis_boliviensis
ENSTSYG00000008027	DDB1	94	96.542	ENSSHAG00000011600	DDB1	100	96.542	Sarcophilus_harrisii
ENSTSYG00000008027	DDB1	94	90.985	ENSSFOG00015011151	ddb1	97	90.985	Scleropages_formosus
ENSTSYG00000008027	DDB1	100	90.614	ENSSMAG00000009495	ddb1	100	90.614	Scophthalmus_maximus
ENSTSYG00000008027	DDB1	100	90.965	ENSSDUG00000004642	ddb1	100	90.965	Seriola_dumerili
ENSTSYG00000008027	DDB1	100	90.965	ENSSLDG00000015804	ddb1	100	90.965	Seriola_lalandi_dorsalis
ENSTSYG00000008027	DDB1	70	100.000	ENSSARG00000003290	-	72	100.000	Sorex_araneus
ENSTSYG00000008027	DDB1	100	97.368	ENSSPUG00000019338	DDB1	100	97.368	Sphenodon_punctatus
ENSTSYG00000008027	DDB1	94	91.163	ENSSPAG00000009888	ddb1	99	91.163	Stegastes_partitus
ENSTSYG00000008027	DDB1	100	98.158	ENSSSCG00000013094	DDB1	100	98.158	Sus_scrofa
ENSTSYG00000008027	DDB1	100	96.579	ENSTGUG00000006414	DDB1	100	96.579	Taeniopygia_guttata
ENSTSYG00000008027	DDB1	94	89.842	ENSTRUG00000016682	ddb1	98	89.842	Takifugu_rubripes
ENSTSYG00000008027	DDB1	88	84.631	ENSTNIG00000009565	ddb1	99	84.631	Tetraodon_nigroviridis
ENSTSYG00000008027	DDB1	92	94.256	ENSTTRG00000011055	DDB1	94	94.256	Tursiops_truncatus
ENSTSYG00000008027	DDB1	94	98.884	ENSUAMG00000017793	DDB1	93	98.884	Ursus_americanus
ENSTSYG00000008027	DDB1	94	98.884	ENSUMAG00000011788	DDB1	98	98.884	Ursus_maritimus
ENSTSYG00000008027	DDB1	90	100.000	ENSVPAG00000007963	DDB1	91	100.000	Vicugna_pacos
ENSTSYG00000008027	DDB1	100	99.123	ENSVVUG00000004987	DDB1	100	99.123	Vulpes_vulpes
ENSTSYG00000008027	DDB1	100	92.832	ENSXETG00000008820	ddb1	100	92.832	Xenopus_tropicalis
ENSTSYG00000008027	DDB1	86	90.816	ENSXCOG00000013956	ddb1	99	90.816	Xiphophorus_couchianus
ENSTSYG00000008027	DDB1	94	90.774	ENSXMAG00000000022	ddb1	99	90.774	Xiphophorus_maculatus