EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000008048 (Gene tree)
Gene ID: 103251946
Gene Symbol: DDX56
Alias: -
Full Name: DEAD-box helicase 56
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Minus strand
Length: 8884 bases
Position: chrKE931518.1:90503-99386
Accession: 103251946
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000007431	ResIII	PF04851.15	3.2e-08	1	1
ENSTSYP00000028909	ResIII	PF04851.15	3.6e-08	1	1
ENSTSYP00000007431	DEAD	PF00270.29	3.3e-39	1	1
ENSTSYP00000028909	DEAD	PF00270.29	3.7e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000027001	DDX56-201	1862	XM_008050554	ENSTSYP00000028909	547 (aa)	XP_008048745	A0A1U7ST86
ENSTSYT00000008100	DDX56-202	1524	-	ENSTSYP00000007431	507 (aa)	XP_021564500	UPI000B52EC4C

Gene Model

Click here to download ENSTSYG00000008048's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000008048's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000008048	DDX56	51	30.337	ENSTSYG00000025817	DDX19A	63	31.301
ENSTSYG00000008048	DDX56	78	31.395	ENSTSYG00000030362	DDX27	52	32.090
ENSTSYG00000008048	DDX56	70	30.245	ENSTSYG00000004557	EIF4A1	87	30.245
ENSTSYG00000008048	DDX56	67	30.563	ENSTSYG00000012432	-	75	30.108
ENSTSYG00000008048	DDX56	68	49.180	ENSTSYG00000002477	-	54	49.180
ENSTSYG00000008048	DDX56	70	30.423	ENSTSYG00000008738	EIF4A3	87	30.423
ENSTSYG00000008048	DDX56	71	31.117	ENSTSYG00000026313	DDX6	74	31.383
ENSTSYG00000008048	DDX56	84	32.826	ENSTSYG00000002978	DDX47	88	34.174
ENSTSYG00000008048	DDX56	64	31.373	ENSTSYG00000029157	-	60	30.986
ENSTSYG00000008048	DDX56	66	30.259	ENSTSYG00000003652	DDX43	54	30.259
ENSTSYG00000008048	DDX56	69	30.155	ENSTSYG00000002540	DDX18	52	31.579
ENSTSYG00000008048	DDX56	69	31.675	ENSTSYG00000002996	DDX52	57	33.146
ENSTSYG00000008048	DDX56	72	30.846	ENSTSYG00000028117	DDX49	76	31.746

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000008048	DDX56	100	96.344	ENSG00000136271	DDX56	100	97.600	Homo_sapiens
ENSTSYG00000008048	DDX56	98	64.260	ENSAPOG00000017113	ddx56	98	64.079	Acanthochromis_polyacanthus
ENSTSYG00000008048	DDX56	100	91.590	ENSAMEG00000017711	DDX56	100	91.042	Ailuropoda_melanoleuca
ENSTSYG00000008048	DDX56	92	59.725	ENSACIG00000013747	ddx56	98	65.385	Amphilophus_citrinellus
ENSTSYG00000008048	DDX56	97	64.074	ENSAOCG00000018059	ddx56	93	67.200	Amphiprion_ocellaris
ENSTSYG00000008048	DDX56	88	67.146	ENSAOCG00000015447	-	87	67.146	Amphiprion_ocellaris
ENSTSYG00000008048	DDX56	99	63.799	ENSAPEG00000007267	ddx56	99	63.262	Amphiprion_percula
ENSTSYG00000008048	DDX56	98	64.312	ENSATEG00000005279	ddx56	98	64.909	Anabas_testudineus
ENSTSYG00000008048	DDX56	98	63.834	ENSACLG00000020113	ddx56	98	64.195	Astatotilapia_calliptera
ENSTSYG00000008048	DDX56	99	60.963	ENSAMXG00000019357	ddx56	99	61.141	Astyanax_mexicanus
ENSTSYG00000008048	DDX56	100	93.236	ENSBTAG00000010602	DDX56	100	92.687	Bos_taurus
ENSTSYG00000008048	DDX56	97	40.642	WBGene00016073	C24H12.4	81	42.065	Caenorhabditis_elegans
ENSTSYG00000008048	DDX56	100	95.612	ENSCJAG00000012233	DDX56	100	95.612	Callithrix_jacchus
ENSTSYG00000008048	DDX56	82	90.157	ENSCAFG00000029295	DDX56	100	89.485	Canis_familiaris
ENSTSYG00000008048	DDX56	100	87.636	ENSCAFG00020019695	DDX56	100	87.636	Canis_lupus_dingo
ENSTSYG00000008048	DDX56	100	93.053	ENSCHIG00000014261	DDX56	100	92.322	Capra_hircus
ENSTSYG00000008048	DDX56	86	89.218	ENSCAPG00000006286	DDX56	100	89.218	Cavia_aperea
ENSTSYG00000008048	DDX56	100	89.945	ENSCPOG00000003359	DDX56	100	89.945	Cavia_porcellus
ENSTSYG00000008048	DDX56	100	95.795	ENSCCAG00000025303	DDX56	100	95.795	Cebus_capucinus
ENSTSYG00000008048	DDX56	100	96.161	ENSCATG00000039389	DDX56	100	95.612	Cercocebus_atys
ENSTSYG00000008048	DDX56	100	92.870	ENSCLAG00000007666	DDX56	100	92.322	Chinchilla_lanigera
ENSTSYG00000008048	DDX56	100	96.344	ENSCSAG00000015636	DDX56	100	96.344	Chlorocebus_sabaeus
ENSTSYG00000008048	DDX56	97	69.485	ENSCPBG00000024556	DDX56	97	68.257	Chrysemys_picta_bellii
ENSTSYG00000008048	DDX56	92	56.360	ENSCING00000005185	-	99	56.556	Ciona_intestinalis
ENSTSYG00000008048	DDX56	91	54.653	ENSCSAVG00000011266	-	99	54.653	Ciona_savignyi
ENSTSYG00000008048	DDX56	100	96.161	ENSCANG00000028187	DDX56	100	96.161	Colobus_angolensis_palliatus
ENSTSYG00000008048	DDX56	100	89.580	ENSCGRG00001019019	Ddx56	100	89.031	Cricetulus_griseus_chok1gshd
ENSTSYG00000008048	DDX56	100	89.580	ENSCGRG00000011870	Ddx56	100	89.031	Cricetulus_griseus_crigri
ENSTSYG00000008048	DDX56	98	64.324	ENSCSEG00000008368	ddx56	98	63.604	Cynoglossus_semilaevis
ENSTSYG00000008048	DDX56	98	64.845	ENSCVAG00000006499	ddx56	91	68.307	Cyprinodon_variegatus
ENSTSYG00000008048	DDX56	98	63.818	ENSDARG00000020913	ddx56	98	64.000	Danio_rerio
ENSTSYG00000008048	DDX56	86	90.275	ENSDNOG00000036526	DDX56	99	89.641	Dasypus_novemcinctus
ENSTSYG00000008048	DDX56	98	46.727	FBgn0001565	Hlc	89	48.617	Drosophila_melanogaster
ENSTSYG00000008048	DDX56	83	80.296	ENSETEG00000002969	-	74	80.296	Echinops_telfairi
ENSTSYG00000008048	DDX56	87	62.316	ENSETEG00000019559	-	100	61.474	Echinops_telfairi
ENSTSYG00000008048	DDX56	98	58.559	ENSEBUG00000009986	ddx56	99	59.279	Eptatretus_burgeri
ENSTSYG00000008048	DDX56	100	93.419	ENSEASG00005017795	DDX56	100	93.601	Equus_asinus_asinus
ENSTSYG00000008048	DDX56	100	93.294	ENSECAG00000019897	DDX56	100	93.491	Equus_caballus
ENSTSYG00000008048	DDX56	86	91.966	ENSEEUG00000004849	DDX56	100	91.332	Erinaceus_europaeus
ENSTSYG00000008048	DDX56	97	66.236	ENSELUG00000004150	ddx56	90	68.959	Esox_lucius
ENSTSYG00000008048	DDX56	99	90.842	ENSFCAG00000010261	DDX56	99	90.476	Felis_catus
ENSTSYG00000008048	DDX56	100	91.590	ENSFDAG00000007128	DDX56	100	91.042	Fukomys_damarensis
ENSTSYG00000008048	DDX56	97	63.941	ENSFHEG00000018008	ddx56	95	68.283	Fundulus_heteroclitus
ENSTSYG00000008048	DDX56	97	62.268	ENSGAFG00000006906	ddx56	97	62.082	Gambusia_affinis
ENSTSYG00000008048	DDX56	93	71.845	ENSGAGG00000006789	DDX56	89	72.600	Gopherus_agassizii
ENSTSYG00000008048	DDX56	100	96.344	ENSGGOG00000012031	DDX56	100	96.344	Gorilla_gorilla
ENSTSYG00000008048	DDX56	92	62.157	ENSHBUG00000015246	ddx56	91	62.549	Haplochromis_burtoni
ENSTSYG00000008048	DDX56	100	91.956	ENSHGLG00000017271	DDX56	100	91.408	Heterocephalus_glaber_female
ENSTSYG00000008048	DDX56	100	91.956	ENSHGLG00100015731	DDX56	100	91.408	Heterocephalus_glaber_male
ENSTSYG00000008048	DDX56	97	64.074	ENSHCOG00000001685	ddx56	97	63.704	Hippocampus_comes
ENSTSYG00000008048	DDX56	98	62.523	ENSIPUG00000006602	ddx56	96	60.962	Ictalurus_punctatus
ENSTSYG00000008048	DDX56	100	92.139	ENSSTOG00000000464	DDX56	100	91.590	Ictidomys_tridecemlineatus
ENSTSYG00000008048	DDX56	99	90.239	ENSJJAG00000014269	Ddx56	100	89.687	Jaculus_jaculus
ENSTSYG00000008048	DDX56	97	63.148	ENSKMAG00000016611	ddx56	98	64.065	Kryptolebias_marmoratus
ENSTSYG00000008048	DDX56	98	63.858	ENSLBEG00000026281	ddx56	98	63.768	Labrus_bergylta
ENSTSYG00000008048	DDX56	97	66.667	ENSLACG00000015551	DDX56	97	66.425	Latimeria_chalumnae
ENSTSYG00000008048	DDX56	99	63.604	ENSLOCG00000015185	ddx56	99	64.286	Lepisosteus_oculatus
ENSTSYG00000008048	DDX56	99	92.237	ENSLAFG00000018206	DDX56	99	92.237	Loxodonta_africana
ENSTSYG00000008048	DDX56	100	96.161	ENSMFAG00000041001	DDX56	100	95.612	Macaca_fascicularis
ENSTSYG00000008048	DDX56	100	95.978	ENSMMUG00000002645	DDX56	100	95.430	Macaca_mulatta
ENSTSYG00000008048	DDX56	100	95.978	ENSMNEG00000028492	DDX56	100	95.430	Macaca_nemestrina
ENSTSYG00000008048	DDX56	100	96.527	ENSMLEG00000043591	DDX56	100	96.527	Mandrillus_leucophaeus
ENSTSYG00000008048	DDX56	97	64.481	ENSMAMG00000007776	ddx56	98	64.663	Mastacembelus_armatus
ENSTSYG00000008048	DDX56	98	63.834	ENSMZEG00005009813	ddx56	98	64.195	Maylandia_zebra
ENSTSYG00000008048	DDX56	100	94.881	ENSMICG00000005550	DDX56	100	94.881	Microcebus_murinus
ENSTSYG00000008048	DDX56	100	90.676	ENSMOCG00000016782	Ddx56	100	90.128	Microtus_ochrogaster
ENSTSYG00000008048	DDX56	91	67.589	ENSMMOG00000009654	ddx56	95	68.182	Mola_mola
ENSTSYG00000008048	DDX56	100	75.725	ENSMODG00000016137	DDX56	100	75.543	Monodelphis_domestica
ENSTSYG00000008048	DDX56	68	64.611	ENSMALG00000016910	ddx56	99	64.611	Monopterus_albus
ENSTSYG00000008048	DDX56	100	89.945	MGP_CAROLIEiJ_G0016069	Ddx56	100	89.397	Mus_caroli
ENSTSYG00000008048	DDX56	100	89.945	ENSMUSG00000004393	Ddx56	100	89.397	Mus_musculus
ENSTSYG00000008048	DDX56	100	90.128	MGP_PahariEiJ_G0016822	Ddx56	100	89.580	Mus_pahari
ENSTSYG00000008048	DDX56	100	89.945	MGP_SPRETEiJ_G0016911	Ddx56	100	89.397	Mus_spretus
ENSTSYG00000008048	DDX56	100	90.859	ENSMPUG00000018196	DDX56	88	90.128	Mustela_putorius_furo
ENSTSYG00000008048	DDX56	100	91.590	ENSMLUG00000003509	DDX56	100	91.042	Myotis_lucifugus
ENSTSYG00000008048	DDX56	100	92.139	ENSNGAG00000018785	Ddx56	100	91.590	Nannospalax_galili
ENSTSYG00000008048	DDX56	91	67.653	ENSNBRG00000002656	ddx56	91	67.653	Neolamprologus_brichardi
ENSTSYG00000008048	DDX56	100	96.161	ENSNLEG00000003816	DDX56	100	96.161	Nomascus_leucogenys
ENSTSYG00000008048	DDX56	91	77.218	ENSMEUG00000006788	DDX56	100	77.218	Notamacropus_eugenii
ENSTSYG00000008048	DDX56	100	89.762	ENSOPRG00000000292	-	100	89.762	Ochotona_princeps
ENSTSYG00000008048	DDX56	69	95.733	ENSODEG00000014807	DDX56	100	95.733	Octodon_degus
ENSTSYG00000008048	DDX56	98	65.922	ENSONIG00000011509	ddx56	98	65.736	Oreochromis_niloticus
ENSTSYG00000008048	DDX56	97	69.606	ENSOANG00000006320	-	100	69.794	Ornithorhynchus_anatinus
ENSTSYG00000008048	DDX56	73	70.574	ENSOANG00000015987	-	94	71.088	Ornithorhynchus_anatinus
ENSTSYG00000008048	DDX56	100	90.676	ENSOCUG00000022918	DDX56	100	90.676	Oryctolagus_cuniculus
ENSTSYG00000008048	DDX56	97	66.239	ENSORLG00000001434	ddx56	91	69.094	Oryzias_latipes
ENSTSYG00000008048	DDX56	98	65.580	ENSORLG00020015718	ddx56	87	69.094	Oryzias_latipes_hni
ENSTSYG00000008048	DDX56	97	66.239	ENSORLG00015003004	ddx56	87	69.094	Oryzias_latipes_hsok
ENSTSYG00000008048	DDX56	98	65.938	ENSOMEG00000022072	ddx56	98	65.938	Oryzias_melastigma
ENSTSYG00000008048	DDX56	100	93.601	ENSOGAG00000009981	DDX56	100	93.601	Otolemur_garnettii
ENSTSYG00000008048	DDX56	100	93.236	ENSOARG00000015240	DDX56	100	92.505	Ovis_aries
ENSTSYG00000008048	DDX56	100	77.231	ENSPPAG00000031263	-	100	77.049	Pan_paniscus
ENSTSYG00000008048	DDX56	100	92.086	ENSPPAG00000029147	DDX56	100	92.086	Pan_paniscus
ENSTSYG00000008048	DDX56	99	90.711	ENSPPRG00000014594	DDX56	99	90.711	Panthera_pardus
ENSTSYG00000008048	DDX56	86	88.136	ENSPTIG00000019500	DDX56	92	87.712	Panthera_tigris_altaica
ENSTSYG00000008048	DDX56	94	79.344	ENSPTRG00000052765	-	100	79.151	Pan_troglodytes
ENSTSYG00000008048	DDX56	100	95.978	ENSPTRG00000019147	DDX56	100	95.978	Pan_troglodytes
ENSTSYG00000008048	DDX56	100	96.161	ENSPANG00000002446	DDX56	100	95.612	Papio_anubis
ENSTSYG00000008048	DDX56	98	64.493	ENSPKIG00000018998	ddx56	90	67.391	Paramormyrops_kingsleyae
ENSTSYG00000008048	DDX56	94	66.221	ENSPMGG00000017421	ddx56	94	67.123	Periophthalmus_magnuspinnatus
ENSTSYG00000008048	DDX56	100	84.283	ENSPCIG00000009336	DDX56	100	83.877	Phascolarctos_cinereus
ENSTSYG00000008048	DDX56	97	64.835	ENSPFOG00000018658	ddx56	91	67.520	Poecilia_formosa
ENSTSYG00000008048	DDX56	97	64.835	ENSPLAG00000019208	ddx56	93	67.886	Poecilia_latipinna
ENSTSYG00000008048	DDX56	97	64.835	ENSPMEG00000001775	ddx56	97	64.899	Poecilia_mexicana
ENSTSYG00000008048	DDX56	97	64.469	ENSPREG00000015142	ddx56	97	64.286	Poecilia_reticulata
ENSTSYG00000008048	DDX56	100	96.892	ENSPPYG00000017591	DDX56	100	96.892	Pongo_abelii
ENSTSYG00000008048	DDX56	96	90.323	ENSPCAG00000011499	DDX56	100	90.323	Procavia_capensis
ENSTSYG00000008048	DDX56	100	96.055	ENSPCOG00000024864	DDX56	100	96.055	Propithecus_coquereli
ENSTSYG00000008048	DDX56	88	94.884	ENSPVAG00000000791	DDX56	88	94.884	Pteropus_vampyrus
ENSTSYG00000008048	DDX56	98	64.014	ENSPNYG00000019212	ddx56	98	64.376	Pundamilia_nyererei
ENSTSYG00000008048	DDX56	98	63.949	ENSPNAG00000025446	ddx56	99	64.312	Pygocentrus_nattereri
ENSTSYG00000008048	DDX56	100	91.042	ENSRNOG00000004670	Ddx56	100	90.494	Rattus_norvegicus
ENSTSYG00000008048	DDX56	100	96.161	ENSRBIG00000030140	DDX56	100	96.161	Rhinopithecus_bieti
ENSTSYG00000008048	DDX56	100	95.795	ENSRROG00000044428	DDX56	100	95.795	Rhinopithecus_roxellana
ENSTSYG00000008048	DDX56	96	44.333	YLR276C	-	91	42.726	Saccharomyces_cerevisiae
ENSTSYG00000008048	DDX56	100	95.430	ENSSBOG00000034339	DDX56	100	95.430	Saimiri_boliviensis_boliviensis
ENSTSYG00000008048	DDX56	85	84.154	ENSSHAG00000016615	DDX56	98	83.940	Sarcophilus_harrisii
ENSTSYG00000008048	DDX56	97	65.568	ENSSFOG00015012795	ddx56	97	64.835	Scleropages_formosus
ENSTSYG00000008048	DDX56	99	63.978	ENSSMAG00000011280	ddx56	98	63.849	Scophthalmus_maximus
ENSTSYG00000008048	DDX56	99	64.401	ENSSDUG00000023597	ddx56	99	64.937	Seriola_dumerili
ENSTSYG00000008048	DDX56	99	64.401	ENSSLDG00000018369	ddx56	99	64.937	Seriola_lalandi_dorsalis
ENSTSYG00000008048	DDX56	75	89.429	ENSSARG00000014363	DDX56	80	86.464	Sorex_araneus
ENSTSYG00000008048	DDX56	99	68.739	ENSSPUG00000000784	DDX56	96	68.190	Sphenodon_punctatus
ENSTSYG00000008048	DDX56	92	67.123	ENSSPAG00000009392	ddx56	94	67.710	Stegastes_partitus
ENSTSYG00000008048	DDX56	100	92.714	ENSSSCG00000016745	DDX56	100	91.985	Sus_scrofa
ENSTSYG00000008048	DDX56	99	64.522	ENSTRUG00000018623	ddx56	90	68.699	Takifugu_rubripes
ENSTSYG00000008048	DDX56	98	61.854	ENSTNIG00000013593	ddx56	91	65.698	Tetraodon_nigroviridis
ENSTSYG00000008048	DDX56	100	92.687	ENSTBEG00000007119	DDX56	100	91.956	Tupaia_belangeri
ENSTSYG00000008048	DDX56	86	91.543	ENSTTRG00000010552	DDX56	100	90.909	Tursiops_truncatus
ENSTSYG00000008048	DDX56	100	91.956	ENSUAMG00000014194	DDX56	100	91.408	Ursus_americanus
ENSTSYG00000008048	DDX56	100	91.956	ENSUMAG00000009666	DDX56	100	91.408	Ursus_maritimus
ENSTSYG00000008048	DDX56	100	90.494	ENSVVUG00000011905	DDX56	100	89.945	Vulpes_vulpes
ENSTSYG00000008048	DDX56	98	66.302	ENSXETG00000019000	ddx56	99	66.788	Xenopus_tropicalis
ENSTSYG00000008048	DDX56	97	64.098	ENSXCOG00000017413	ddx56	97	63.806	Xiphophorus_couchianus
ENSTSYG00000008048	DDX56	97	64.587	ENSXMAG00000018749	ddx56	97	64.037	Xiphophorus_maculatus