EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000008195 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: cleavage and polyadenylation specificity factor subunit 4 pseudogene
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Plus strand
Length: 2039 bases
Position: chrKE937575.1:7781-9819
Accession: 103256952
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000013400	zf-CCCH	PF00642.24	1.2e-15	1	1
ENSTSYP00000023156	zf-CCCH	PF00642.24	1.8e-15	1	1
ENSTSYP00000010264	zf-CCCH	PF00642.24	9.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000038540	-	738	-	ENSTSYP00000023156	245 (aa)	-	UPI000C2F353A
ENSTSYT00000014603	-	687	-	ENSTSYP00000013400	228 (aa)	-	UPI000C2F8010
ENSTSYT00000011190	-	537	-	ENSTSYP00000010264	178 (aa)	-	UPI000C2F7185

Gene Model

Click here to download ENSTSYG00000008195's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000008195's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000008195	-	99	92.000	ENSTSYG00000005712	-	88	92.593
ENSTSYG00000008195	-	100	97.191	ENSTSYG00000014604	-	92	96.889

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000008195	-	99	91.556	ENSG00000160917	CPSF4	100	92.857	Homo_sapiens
ENSTSYG00000008195	-	69	65.169	ENSAPOG00000004921	cpsf4	100	65.169	Acanthochromis_polyacanthus
ENSTSYG00000008195	-	99	79.600	ENSAMEG00000006252	CPSF4	89	82.988	Ailuropoda_melanoleuca
ENSTSYG00000008195	-	99	80.889	ENSACIG00000009248	cpsf4	88	81.019	Amphilophus_citrinellus
ENSTSYG00000008195	-	99	76.016	ENSAOCG00000019616	cpsf4	89	75.949	Amphiprion_ocellaris
ENSTSYG00000008195	-	99	76.016	ENSAPEG00000011679	cpsf4	89	75.949	Amphiprion_percula
ENSTSYG00000008195	-	99	79.386	ENSATEG00000007010	cpsf4	88	79.452	Anabas_testudineus
ENSTSYG00000008195	-	99	76.800	ENSACAG00000012941	CPSF4	79	78.838	Anolis_carolinensis
ENSTSYG00000008195	-	100	89.503	ENSANAG00000021360	CPSF4	85	89.503	Aotus_nancymaae
ENSTSYG00000008195	-	99	74.667	ENSACLG00000010374	cpsf4	89	74.262	Astatotilapia_calliptera
ENSTSYG00000008195	-	100	77.348	ENSAMXG00000031647	cpsf4	89	74.380	Astyanax_mexicanus
ENSTSYG00000008195	-	99	91.111	ENSBTAG00000002090	CPSF4	88	91.667	Bos_taurus
ENSTSYG00000008195	-	100	89.503	ENSCJAG00000015826	CPSF4	85	89.503	Callithrix_jacchus
ENSTSYG00000008195	-	100	90.055	ENSCAFG00000015036	CPSF4	85	90.055	Canis_familiaris
ENSTSYG00000008195	-	89	88.889	ENSCAFG00020014462	CPSF4	78	88.889	Canis_lupus_dingo
ENSTSYG00000008195	-	100	89.503	ENSCHIG00000014313	CPSF4	85	89.503	Capra_hircus
ENSTSYG00000008195	-	89	89.506	ENSCAPG00000013881	CPSF4	82	89.506	Cavia_aperea
ENSTSYG00000008195	-	99	92.000	ENSCPOG00000001783	CPSF4	88	92.593	Cavia_porcellus
ENSTSYG00000008195	-	100	89.503	ENSCCAG00000028291	CPSF4	85	89.503	Cebus_capucinus
ENSTSYG00000008195	-	100	89.503	ENSCATG00000038440	CPSF4	85	89.503	Cercocebus_atys
ENSTSYG00000008195	-	100	89.503	ENSCLAG00000007050	CPSF4	85	89.503	Chinchilla_lanigera
ENSTSYG00000008195	-	99	79.600	ENSCSAG00000017795	CPSF4	89	82.573	Chlorocebus_sabaeus
ENSTSYG00000008195	-	84	76.037	ENSCPBG00000020869	CPSF4	100	78.341	Chrysemys_picta_bellii
ENSTSYG00000008195	-	64	77.397	ENSCPBG00000010269	-	83	78.832	Chrysemys_picta_bellii
ENSTSYG00000008195	-	95	51.489	ENSCING00000021080	-	86	50.885	Ciona_intestinalis
ENSTSYG00000008195	-	94	46.947	ENSCSAVG00000011469	-	50	66.667	Ciona_savignyi
ENSTSYG00000008195	-	100	89.503	ENSCANG00000019384	CPSF4	85	89.503	Colobus_angolensis_palliatus
ENSTSYG00000008195	-	99	92.000	ENSCGRG00001024184	Cpsf4	88	92.593	Cricetulus_griseus_chok1gshd
ENSTSYG00000008195	-	100	90.055	ENSCGRG00000013892	Cpsf4	85	90.055	Cricetulus_griseus_crigri
ENSTSYG00000008195	-	100	77.901	ENSCSEG00000019055	cpsf4	89	74.684	Cynoglossus_semilaevis
ENSTSYG00000008195	-	99	74.797	ENSCVAG00000016528	cpsf4	89	74.684	Cyprinodon_variegatus
ENSTSYG00000008195	-	99	73.016	ENSDARG00000020217	cpsf4	89	73.251	Danio_rerio
ENSTSYG00000008195	-	99	79.600	ENSDNOG00000006344	CPSF4	89	82.988	Dasypus_novemcinctus
ENSTSYG00000008195	-	85	77.982	ENSDORG00000000742	Cpsf4	100	81.651	Dipodomys_ordii
ENSTSYG00000008195	-	99	48.929	FBgn0015621	Clp	89	50.758	Drosophila_melanogaster
ENSTSYG00000008195	-	73	90.909	ENSETEG00000002608	CPSF4	59	91.176	Echinops_telfairi
ENSTSYG00000008195	-	97	68.584	ENSEBUG00000012552	cpsf4	86	67.442	Eptatretus_burgeri
ENSTSYG00000008195	-	99	92.000	ENSEASG00005002487	CPSF4	88	92.593	Equus_asinus_asinus
ENSTSYG00000008195	-	100	90.055	ENSECAG00000007525	CPSF4	85	90.055	Equus_caballus
ENSTSYG00000008195	-	81	95.522	ENSEEUG00000002158	CPSF4	72	95.522	Erinaceus_europaeus
ENSTSYG00000008195	-	99	73.123	ENSELUG00000011481	cpsf4	89	72.951	Esox_lucius
ENSTSYG00000008195	-	100	90.055	ENSFCAG00000015070	CPSF4	85	90.055	Felis_catus
ENSTSYG00000008195	-	99	88.000	ENSFALG00000013799	CPSF4	88	88.426	Ficedula_albicollis
ENSTSYG00000008195	-	64	51.316	ENSFALG00000012906	-	73	62.162	Ficedula_albicollis
ENSTSYG00000008195	-	99	89.444	ENSFDAG00000014092	CPSF4	96	89.444	Fukomys_damarensis
ENSTSYG00000008195	-	99	74.390	ENSFHEG00000010880	cpsf4	89	74.262	Fundulus_heteroclitus
ENSTSYG00000008195	-	99	74.477	ENSGMOG00000002330	cpsf4	89	74.348	Gadus_morhua
ENSTSYG00000008195	-	99	87.556	ENSGALG00000004714	CPSF4	88	87.963	Gallus_gallus
ENSTSYG00000008195	-	75	35.079	ENSGALG00000004441	-	98	34.555	Gallus_gallus
ENSTSYG00000008195	-	99	74.694	ENSGAFG00000010580	cpsf4	89	74.576	Gambusia_affinis
ENSTSYG00000008195	-	99	77.872	ENSGACG00000007792	cpsf4	89	77.876	Gasterosteus_aculeatus
ENSTSYG00000008195	-	71	74.074	ENSGAGG00000020579	-	77	78.986	Gopherus_agassizii
ENSTSYG00000008195	-	99	77.200	ENSGAGG00000021835	CPSF4	89	79.253	Gopherus_agassizii
ENSTSYG00000008195	-	100	89.503	ENSGGOG00000015131	CPSF4	85	89.503	Gorilla_gorilla
ENSTSYG00000008195	-	99	74.390	ENSHBUG00000013699	cpsf4	89	74.262	Haplochromis_burtoni
ENSTSYG00000008195	-	100	89.503	ENSHGLG00000017150	CPSF4	85	89.503	Heterocephalus_glaber_female
ENSTSYG00000008195	-	100	63.483	ENSHGLG00100017302	-	81	63.483	Heterocephalus_glaber_male
ENSTSYG00000008195	-	98	87.640	ENSHGLG00100009215	-	100	87.640	Heterocephalus_glaber_male
ENSTSYG00000008195	-	99	73.984	ENSHCOG00000004397	cpsf4	89	73.840	Hippocampus_comes
ENSTSYG00000008195	-	99	72.619	ENSIPUG00000017147	cpsf4	89	74.074	Ictalurus_punctatus
ENSTSYG00000008195	-	99	91.556	ENSSTOG00000001688	CPSF4	88	92.130	Ictidomys_tridecemlineatus
ENSTSYG00000008195	-	100	89.503	ENSJJAG00000019426	Cpsf4	85	89.503	Jaculus_jaculus
ENSTSYG00000008195	-	99	73.171	ENSKMAG00000015642	cpsf4	89	73.529	Kryptolebias_marmoratus
ENSTSYG00000008195	-	99	59.471	ENSLACG00000018470	-	88	57.604	Latimeria_chalumnae
ENSTSYG00000008195	-	99	76.096	ENSLACG00000010938	CPSF4	89	76.033	Latimeria_chalumnae
ENSTSYG00000008195	-	99	74.800	ENSLOCG00000004814	cpsf4	89	77.593	Lepisosteus_oculatus
ENSTSYG00000008195	-	89	89.506	ENSLAFG00000000159	CPSF4	100	89.506	Loxodonta_africana
ENSTSYG00000008195	-	100	89.503	ENSMFAG00000001462	CPSF4	100	92.188	Macaca_fascicularis
ENSTSYG00000008195	-	100	89.503	ENSMMUG00000019191	CPSF4	85	89.503	Macaca_mulatta
ENSTSYG00000008195	-	100	89.503	ENSMNEG00000032306	CPSF4	85	89.503	Macaca_nemestrina
ENSTSYG00000008195	-	100	89.503	ENSMLEG00000034721	CPSF4	85	89.503	Mandrillus_leucophaeus
ENSTSYG00000008195	-	99	74.899	ENSMAMG00000006244	cpsf4	89	74.790	Mastacembelus_armatus
ENSTSYG00000008195	-	99	74.390	ENSMZEG00005007515	cpsf4	89	74.262	Maylandia_zebra
ENSTSYG00000008195	-	93	87.678	ENSMGAG00000004235	CPSF4	100	87.678	Meleagris_gallopavo
ENSTSYG00000008195	-	100	90.055	ENSMAUG00000021253	Cpsf4	85	90.055	Mesocricetus_auratus
ENSTSYG00000008195	-	100	89.503	ENSMICG00000017429	CPSF4	85	89.503	Microcebus_murinus
ENSTSYG00000008195	-	100	90.055	ENSMOCG00000014901	Cpsf4	85	90.055	Microtus_ochrogaster
ENSTSYG00000008195	-	100	77.901	ENSMMOG00000001813	cpsf4	89	75.210	Mola_mola
ENSTSYG00000008195	-	99	78.400	ENSMODG00000001367	CPSF4	89	80.913	Monodelphis_domestica
ENSTSYG00000008195	-	99	76.613	ENSMALG00000012611	cpsf4	89	75.833	Monopterus_albus
ENSTSYG00000008195	-	99	92.000	MGP_CAROLIEiJ_G0028012	Cpsf4	88	92.593	Mus_caroli
ENSTSYG00000008195	-	99	92.000	ENSMUSG00000029625	Cpsf4	88	92.593	Mus_musculus
ENSTSYG00000008195	-	99	92.000	MGP_PahariEiJ_G0024581	Cpsf4	88	92.593	Mus_pahari
ENSTSYG00000008195	-	99	91.556	MGP_SPRETEiJ_G0029013	Cpsf4	88	92.130	Mus_spretus
ENSTSYG00000008195	-	99	79.600	ENSMPUG00000016508	CPSF4	89	82.988	Mustela_putorius_furo
ENSTSYG00000008195	-	93	91.469	ENSMLUG00000010980	CPSF4	100	91.469	Myotis_lucifugus
ENSTSYG00000008195	-	100	89.503	ENSNGAG00000001567	Cpsf4	85	89.503	Nannospalax_galili
ENSTSYG00000008195	-	97	73.554	ENSNBRG00000003943	cpsf4	96	74.262	Neolamprologus_brichardi
ENSTSYG00000008195	-	99	91.556	ENSNLEG00000011074	CPSF4	88	92.130	Nomascus_leucogenys
ENSTSYG00000008195	-	99	78.400	ENSMEUG00000006955	CPSF4	89	80.913	Notamacropus_eugenii
ENSTSYG00000008195	-	99	79.200	ENSOPRG00000013663	CPSF4	89	82.158	Ochotona_princeps
ENSTSYG00000008195	-	98	68.050	ENSODEG00000009779	-	89	67.811	Octodon_degus
ENSTSYG00000008195	-	97	78.281	ENSODEG00000018283	-	78	84.615	Octodon_degus
ENSTSYG00000008195	-	100	90.055	ENSODEG00000011181	-	85	90.055	Octodon_degus
ENSTSYG00000008195	-	99	74.390	ENSONIG00000008495	cpsf4	89	74.262	Oreochromis_niloticus
ENSTSYG00000008195	-	99	49.421	ENSOANG00000009568	-	83	51.101	Ornithorhynchus_anatinus
ENSTSYG00000008195	-	93	80.426	ENSOANG00000007729	CPSF4	100	80.426	Ornithorhynchus_anatinus
ENSTSYG00000008195	-	99	79.200	ENSOCUG00000002437	CPSF4	63	82.158	Oryctolagus_cuniculus
ENSTSYG00000008195	-	99	74.390	ENSORLG00000022798	cpsf4	89	74.262	Oryzias_latipes
ENSTSYG00000008195	-	99	74.390	ENSORLG00020008548	cpsf4	89	74.262	Oryzias_latipes_hni
ENSTSYG00000008195	-	99	74.390	ENSORLG00015019575	cpsf4	89	74.262	Oryzias_latipes_hsok
ENSTSYG00000008195	-	100	75.691	ENSOMEG00000005176	cpsf4	89	73.418	Oryzias_melastigma
ENSTSYG00000008195	-	99	79.600	ENSOGAG00000010884	CPSF4	89	82.573	Otolemur_garnettii
ENSTSYG00000008195	-	99	71.260	ENSOARG00000018668	CPSF4	89	70.204	Ovis_aries
ENSTSYG00000008195	-	100	88.950	ENSPPAG00000043355	CPSF4	85	88.950	Pan_paniscus
ENSTSYG00000008195	-	100	90.055	ENSPPRG00000003134	CPSF4	85	90.055	Panthera_pardus
ENSTSYG00000008195	-	100	85.635	ENSPTIG00000005604	CPSF4	89	82.573	Panthera_tigris_altaica
ENSTSYG00000008195	-	100	88.950	ENSPTRG00000019453	CPSF4	85	88.950	Pan_troglodytes
ENSTSYG00000008195	-	100	89.503	ENSPANG00000023123	CPSF4	85	89.503	Papio_anubis
ENSTSYG00000008195	-	99	74.510	ENSPKIG00000014278	cpsf4	89	74.390	Paramormyrops_kingsleyae
ENSTSYG00000008195	-	85	61.026	ENSPSIG00000018198	-	100	60.825	Pelodiscus_sinensis
ENSTSYG00000008195	-	84	75.576	ENSPSIG00000011229	CPSF4	100	77.880	Pelodiscus_sinensis
ENSTSYG00000008195	-	99	75.111	ENSPMGG00000017735	cpsf4	87	72.936	Periophthalmus_magnuspinnatus
ENSTSYG00000008195	-	100	90.055	ENSPEMG00000004508	Cpsf4	85	90.055	Peromyscus_maniculatus_bairdii
ENSTSYG00000008195	-	99	78.400	ENSPCIG00000024776	CPSF4	89	80.913	Phascolarctos_cinereus
ENSTSYG00000008195	-	99	74.694	ENSPFOG00000014912	cpsf4	89	74.576	Poecilia_formosa
ENSTSYG00000008195	-	99	74.009	ENSPLAG00000009599	cpsf4	88	73.394	Poecilia_latipinna
ENSTSYG00000008195	-	99	74.694	ENSPMEG00000009790	cpsf4	89	74.576	Poecilia_mexicana
ENSTSYG00000008195	-	99	73.878	ENSPREG00000018166	cpsf4	89	70.940	Poecilia_reticulata
ENSTSYG00000008195	-	92	78.723	ENSPPYG00000017378	CPSF4	100	81.702	Pongo_abelii
ENSTSYG00000008195	-	99	78.800	ENSPCAG00000001892	CPSF4	89	82.158	Procavia_capensis
ENSTSYG00000008195	-	100	90.055	ENSPCOG00000012771	CPSF4	85	90.055	Propithecus_coquereli
ENSTSYG00000008195	-	99	72.800	ENSPVAG00000007531	CPSF4	89	75.934	Pteropus_vampyrus
ENSTSYG00000008195	-	99	74.390	ENSPNYG00000018559	cpsf4	89	74.262	Pundamilia_nyererei
ENSTSYG00000008195	-	99	74.900	ENSPNAG00000003736	cpsf4	89	75.207	Pygocentrus_nattereri
ENSTSYG00000008195	-	99	91.556	ENSRNOG00000000985	Cpsf4	88	92.130	Rattus_norvegicus
ENSTSYG00000008195	-	98	89.326	ENSRBIG00000033886	CPSF4	100	89.326	Rhinopithecus_bieti
ENSTSYG00000008195	-	99	91.556	ENSRROG00000040431	CPSF4	88	92.130	Rhinopithecus_roxellana
ENSTSYG00000008195	-	100	89.503	ENSSBOG00000020493	CPSF4	100	92.188	Saimiri_boliviensis_boliviensis
ENSTSYG00000008195	-	99	78.400	ENSSHAG00000011533	CPSF4	89	80.913	Sarcophilus_harrisii
ENSTSYG00000008195	-	99	75.097	ENSSFOG00015007883	cpsf4	89	75.000	Scleropages_formosus
ENSTSYG00000008195	-	99	80.531	ENSSMAG00000006374	cpsf4	88	80.645	Scophthalmus_maximus
ENSTSYG00000008195	-	99	75.403	ENSSDUG00000018887	cpsf4	89	75.314	Seriola_dumerili
ENSTSYG00000008195	-	99	75.403	ENSSLDG00000019078	cpsf4	89	75.314	Seriola_lalandi_dorsalis
ENSTSYG00000008195	-	92	79.574	ENSSARG00000012416	CPSF4	100	82.553	Sorex_araneus
ENSTSYG00000008195	-	94	61.751	ENSSPUG00000014803	-	84	61.058	Sphenodon_punctatus
ENSTSYG00000008195	-	99	78.800	ENSSPUG00000003549	CPSF4	89	78.838	Sphenodon_punctatus
ENSTSYG00000008195	-	99	82.222	ENSSPAG00000006174	cpsf4	88	82.407	Stegastes_partitus
ENSTSYG00000008195	-	99	91.556	ENSSSCG00000026896	CPSF4	88	92.130	Sus_scrofa
ENSTSYG00000008195	-	99	86.784	ENSTGUG00000007552	CPSF4	88	87.156	Taeniopygia_guttata
ENSTSYG00000008195	-	99	73.361	ENSTRUG00000024220	cpsf4	89	73.191	Takifugu_rubripes
ENSTSYG00000008195	-	99	72.951	ENSTNIG00000006265	cpsf4	89	73.617	Tetraodon_nigroviridis
ENSTSYG00000008195	-	92	71.915	ENSTBEG00000011406	CPSF4	100	72.340	Tupaia_belangeri
ENSTSYG00000008195	-	79	91.083	ENSTTRG00000003007	CPSF4	63	91.892	Tursiops_truncatus
ENSTSYG00000008195	-	89	92.079	ENSUAMG00000008051	CPSF4	76	90.955	Ursus_americanus
ENSTSYG00000008195	-	99	91.556	ENSUMAG00000009474	CPSF4	88	92.130	Ursus_maritimus
ENSTSYG00000008195	-	99	91.556	ENSVVUG00000008824	CPSF4	88	92.130	Vulpes_vulpes
ENSTSYG00000008195	-	97	58.537	ENSXETG00000004641	cpsf4l	88	56.723	Xenopus_tropicalis
ENSTSYG00000008195	-	99	73.462	ENSXETG00000009892	cpsf4	90	74.900	Xenopus_tropicalis
ENSTSYG00000008195	-	100	76.796	ENSXCOG00000016040	cpsf4	89	74.153	Xiphophorus_couchianus
ENSTSYG00000008195	-	99	74.694	ENSXMAG00000024670	cpsf4	89	74.576	Xiphophorus_maculatus