EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTSYG00000008776 (Gene tree)
Gene ID: -
Gene Symbol: RTL3
Alias: FLJ38865|Mar3|Mart3|SIRH9|ZCCHC5|ZHC5
Full Name: retrotransposon Gag like 3
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Minus strand
Length: 1455 bases
Position: chrKE943564.1:162503-163957
Accession: 103267802
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000008042	zf-CCHC	PF00098.23	0.0002	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000008761	RTL3-201	1341	XM_008065382	ENSTSYP00000008042	446 (aa)	XP_008063573	UPI000C2F4771

Gene Model

Click here to download ENSTSYG00000008776's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000008776's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000008776	RTL3	99	64.644	ENSG00000179300	RTL3	99	64.854	Homo_sapiens
ENSTSYG00000008776	RTL3	100	58.865	ENSCGRG00001015952	Rtl3	100	59.102	Cricetulus_griseus_chok1gshd
ENSTSYG00000008776	RTL3	100	60.079	ENSDORG00000029995	Rtl3	100	60.474	Dipodomys_ordii
ENSTSYG00000008776	RTL3	100	64.634	ENSECAG00000029496	RTL3	100	64.634	Equus_caballus
ENSTSYG00000008776	RTL3	100	57.435	ENSSTOG00000027152	RTL3	100	53.690	Ictidomys_tridecemlineatus
ENSTSYG00000008776	RTL3	100	56.008	ENSJJAG00000014790	-	100	55.859	Jaculus_jaculus
ENSTSYG00000008776	RTL3	100	59.102	ENSMAUG00000011823	Rtl3	100	59.338	Mesocricetus_auratus
ENSTSYG00000008776	RTL3	100	66.116	ENSMICG00000004901	RTL3	100	66.116	Microcebus_murinus
ENSTSYG00000008776	RTL3	100	49.177	ENSMOCG00000017247	Rtl3	100	49.177	Microtus_ochrogaster
ENSTSYG00000008776	RTL3	100	58.191	MGP_CAROLIEiJ_G0033333	Rtl3	100	58.191	Mus_caroli
ENSTSYG00000008776	RTL3	100	57.512	ENSMUSG00000047686	Rtl3	100	57.512	Mus_musculus
ENSTSYG00000008776	RTL3	91	55.944	MGP_PahariEiJ_G0031869	Rtl3	76	56.808	Mus_pahari
ENSTSYG00000008776	RTL3	100	57.277	MGP_SPRETEiJ_G0034497	Rtl3	100	57.277	Mus_spretus
ENSTSYG00000008776	RTL3	100	62.857	ENSNGAG00000002851	Rtl3	97	62.857	Nannospalax_galili
ENSTSYG00000008776	RTL3	100	53.464	ENSOCUG00000025689	RTL3	100	53.464	Oryctolagus_cuniculus
ENSTSYG00000008776	RTL3	100	69.565	ENSPCOG00000016711	RTL3	100	69.565	Propithecus_coquereli
ENSTSYG00000008776	RTL3	100	57.933	ENSRNOG00000002429	Rtl3	97	57.933	Rattus_norvegicus
ENSTSYG00000008776	RTL3	100	62.397	ENSTBEG00000002464	RTL3	100	62.397	Tupaia_belangeri