EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTSYG00000008861 (Gene tree)
Gene ID: 103273642
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Minus strand
Length: 73885 bases
Position: chrKE948615.1:1699204-1773088
Accession: 103273642
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000026274	Rif1_N	PF12231.8	7.1e-56	1	2
ENSTSYP00000026274	Rif1_N	PF12231.8	7.1e-56	2	2
ENSTSYP00000008173	Rif1_N	PF12231.8	7.3e-56	1	2
ENSTSYP00000008173	Rif1_N	PF12231.8	7.3e-56	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000008914	RIF1-201	7245	XM_008071081	ENSTSYP00000008173	2415 (aa)	XP_021574742	UPI000C2F6DC6
ENSTSYT00000039219	RIF1-202	7167	-	ENSTSYP00000026274	2389 (aa)	-	UPI000C2F6357

Gene Model

Click here to download ENSTSYG00000008861's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000008861's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000008861	RIF1	100	80.113	ENSG00000080345	RIF1	97	82.826	Homo_sapiens
ENSTSYG00000008861	RIF1	62	46.541	ENSAPOG00000011073	rif1	64	46.462	Acanthochromis_polyacanthus
ENSTSYG00000008861	RIF1	100	77.567	ENSAMEG00000008461	RIF1	99	77.527	Ailuropoda_melanoleuca
ENSTSYG00000008861	RIF1	63	47.772	ENSACIG00000017765	rif1	69	47.536	Amphilophus_citrinellus
ENSTSYG00000008861	RIF1	64	46.508	ENSAOCG00000017231	rif1	66	46.431	Amphiprion_ocellaris
ENSTSYG00000008861	RIF1	62	50.850	ENSAPEG00000013228	rif1	65	50.850	Amphiprion_percula
ENSTSYG00000008861	RIF1	64	47.399	ENSATEG00000022887	rif1	68	45.699	Anabas_testudineus
ENSTSYG00000008861	RIF1	94	65.517	ENSAPLG00000007092	RIF1	97	65.517	Anas_platyrhynchos
ENSTSYG00000008861	RIF1	89	58.333	ENSACAG00000003714	RIF1	96	58.333	Anolis_carolinensis
ENSTSYG00000008861	RIF1	100	78.661	ENSANAG00000024840	RIF1	99	78.661	Aotus_nancymaae
ENSTSYG00000008861	RIF1	67	49.055	ENSAMXG00000010910	rif1	69	48.868	Astyanax_mexicanus
ENSTSYG00000008861	RIF1	96	77.783	ENSBTAG00000021020	RIF1	99	77.783	Bos_taurus
ENSTSYG00000008861	RIF1	100	78.580	ENSCJAG00000003138	RIF1	99	78.580	Callithrix_jacchus
ENSTSYG00000008861	RIF1	100	76.146	ENSCAFG00000005670	RIF1	97	76.187	Canis_familiaris
ENSTSYG00000008861	RIF1	100	75.393	ENSCAFG00020016401	RIF1	99	75.433	Canis_lupus_dingo
ENSTSYG00000008861	RIF1	99	84.946	ENSCHIG00000020327	RIF1	96	84.946	Capra_hircus
ENSTSYG00000008861	RIF1	84	78.469	ENSCAPG00000008957	RIF1	99	78.469	Cavia_aperea
ENSTSYG00000008861	RIF1	100	67.270	ENSCPOG00000037898	RIF1	99	67.390	Cavia_porcellus
ENSTSYG00000008861	RIF1	100	77.894	ENSCCAG00000024760	RIF1	99	77.894	Cebus_capucinus
ENSTSYG00000008861	RIF1	100	79.831	ENSCATG00000033353	RIF1	99	79.831	Cercocebus_atys
ENSTSYG00000008861	RIF1	96	72.127	ENSCLAG00000001517	RIF1	97	72.084	Chinchilla_lanigera
ENSTSYG00000008861	RIF1	100	79.952	ENSCSAG00000016089	RIF1	99	79.952	Chlorocebus_sabaeus
ENSTSYG00000008861	RIF1	97	73.401	ENSCHOG00000007187	RIF1	97	73.493	Choloepus_hoffmanni
ENSTSYG00000008861	RIF1	91	63.750	ENSCPBG00000025885	RIF1	94	69.259	Chrysemys_picta_bellii
ENSTSYG00000008861	RIF1	100	79.538	ENSCANG00000028962	RIF1	100	78.896	Colobus_angolensis_palliatus
ENSTSYG00000008861	RIF1	100	81.720	ENSCGRG00001024589	Rif1	99	81.720	Cricetulus_griseus_chok1gshd
ENSTSYG00000008861	RIF1	99	82.759	ENSCGRG00000010713	Rif1	99	82.759	Cricetulus_griseus_crigri
ENSTSYG00000008861	RIF1	66	56.680	ENSCSEG00000003945	rif1	67	56.680	Cynoglossus_semilaevis
ENSTSYG00000008861	RIF1	62	48.961	ENSCVAG00000022479	rif1	67	48.961	Cyprinodon_variegatus
ENSTSYG00000008861	RIF1	64	49.435	ENSDARG00000062650	rif1	67	49.519	Danio_rerio
ENSTSYG00000008861	RIF1	99	73.797	ENSDNOG00000011194	RIF1	97	73.797	Dasypus_novemcinctus
ENSTSYG00000008861	RIF1	94	66.692	ENSETEG00000012421	RIF1	93	66.338	Echinops_telfairi
ENSTSYG00000008861	RIF1	93	94.118	ENSEASG00005023434	RIF1	99	94.118	Equus_asinus_asinus
ENSTSYG00000008861	RIF1	96	80.967	ENSECAG00000012679	RIF1	99	80.967	Equus_caballus
ENSTSYG00000008861	RIF1	64	48.405	ENSELUG00000006826	rif1	57	48.339	Esox_lucius
ENSTSYG00000008861	RIF1	100	76.861	ENSFCAG00000029742	RIF1	99	76.861	Felis_catus
ENSTSYG00000008861	RIF1	79	60.955	ENSFALG00000013874	RIF1	91	61.517	Ficedula_albicollis
ENSTSYG00000008861	RIF1	100	71.020	ENSFDAG00000006538	RIF1	99	70.979	Fukomys_damarensis
ENSTSYG00000008861	RIF1	61	48.097	ENSFHEG00000013721	rif1	66	47.389	Fundulus_heteroclitus
ENSTSYG00000008861	RIF1	52	53.782	ENSGMOG00000003517	rif1	81	53.782	Gadus_morhua
ENSTSYG00000008861	RIF1	84	64.897	ENSGALG00000012484	RIF1	95	65.192	Gallus_gallus
ENSTSYG00000008861	RIF1	62	48.256	ENSGAFG00000017196	rif1	66	51.639	Gambusia_affinis
ENSTSYG00000008861	RIF1	59	55.510	ENSGACG00000008579	rif1	65	55.020	Gasterosteus_aculeatus
ENSTSYG00000008861	RIF1	88	71.084	ENSGAGG00000012595	RIF1	97	72.205	Gopherus_agassizii
ENSTSYG00000008861	RIF1	90	82.546	ENSGGOG00000040178	RIF1	96	82.546	Gorilla_gorilla
ENSTSYG00000008861	RIF1	61	58.723	ENSHBUG00000007125	rif1	67	58.723	Haplochromis_burtoni
ENSTSYG00000008861	RIF1	94	71.071	ENSHGLG00100009807	RIF1	99	71.028	Heterocephalus_glaber_male
ENSTSYG00000008861	RIF1	63	46.307	ENSHCOG00000015943	rif1	60	46.105	Hippocampus_comes
ENSTSYG00000008861	RIF1	100	75.140	ENSSTOG00000020712	RIF1	99	75.210	Ictidomys_tridecemlineatus
ENSTSYG00000008861	RIF1	100	66.572	ENSJJAG00000023000	Rif1	100	66.979	Jaculus_jaculus
ENSTSYG00000008861	RIF1	63	46.372	ENSKMAG00000002852	rif1	67	46.372	Kryptolebias_marmoratus
ENSTSYG00000008861	RIF1	63	47.938	ENSLBEG00000023196	rif1	60	47.717	Labrus_bergylta
ENSTSYG00000008861	RIF1	84	63.772	ENSLACG00000005425	RIF1	89	63.772	Latimeria_chalumnae
ENSTSYG00000008861	RIF1	62	51.491	ENSLOCG00000002657	rif1	82	52.090	Lepisosteus_oculatus
ENSTSYG00000008861	RIF1	100	74.678	ENSLAFG00000009796	RIF1	99	74.436	Loxodonta_africana
ENSTSYG00000008861	RIF1	100	79.831	ENSMFAG00000032233	RIF1	99	79.831	Macaca_fascicularis
ENSTSYG00000008861	RIF1	100	79.831	ENSMMUG00000008611	RIF1	99	79.831	Macaca_mulatta
ENSTSYG00000008861	RIF1	100	79.710	ENSMNEG00000031616	RIF1	99	79.710	Macaca_nemestrina
ENSTSYG00000008861	RIF1	100	79.871	ENSMLEG00000042945	RIF1	99	79.871	Mandrillus_leucophaeus
ENSTSYG00000008861	RIF1	73	45.036	ENSMAMG00000001745	rif1	65	49.541	Mastacembelus_armatus
ENSTSYG00000008861	RIF1	65	47.230	ENSMZEG00005020920	rif1	72	47.230	Maylandia_zebra
ENSTSYG00000008861	RIF1	83	60.497	ENSMGAG00000012732	RIF1	95	58.333	Meleagris_gallopavo
ENSTSYG00000008861	RIF1	94	74.095	ENSMAUG00000013158	Rif1	99	74.095	Mesocricetus_auratus
ENSTSYG00000008861	RIF1	100	80.774	ENSMICG00000046127	RIF1	99	80.774	Microcebus_murinus
ENSTSYG00000008861	RIF1	100	67.418	ENSMOCG00000009381	Rif1	99	67.418	Microtus_ochrogaster
ENSTSYG00000008861	RIF1	50	47.260	ENSMMOG00000006519	rif1	51	47.101	Mola_mola
ENSTSYG00000008861	RIF1	99	73.684	ENSMODG00000003703	RIF1	97	73.684	Monodelphis_domestica
ENSTSYG00000008861	RIF1	63	45.014	ENSMALG00000016759	rif1	73	45.014	Monopterus_albus
ENSTSYG00000008861	RIF1	99	81.720	MGP_CAROLIEiJ_G0023555	Rif1	97	81.720	Mus_caroli
ENSTSYG00000008861	RIF1	99	81.720	ENSMUSG00000036202	Rif1	97	81.720	Mus_musculus
ENSTSYG00000008861	RIF1	100	65.822	MGP_PahariEiJ_G0025006	Rif1	99	65.822	Mus_pahari
ENSTSYG00000008861	RIF1	99	81.720	MGP_SPRETEiJ_G0024476	Rif1	97	81.720	Mus_spretus
ENSTSYG00000008861	RIF1	100	76.461	ENSMPUG00000000371	RIF1	99	76.461	Mustela_putorius_furo
ENSTSYG00000008861	RIF1	92	76.109	ENSMLUG00000003376	RIF1	99	76.109	Myotis_lucifugus
ENSTSYG00000008861	RIF1	100	70.415	ENSNGAG00000009268	Rif1	99	70.375	Nannospalax_galili
ENSTSYG00000008861	RIF1	78	47.368	ENSNBRG00000014257	rif1	78	47.368	Neolamprologus_brichardi
ENSTSYG00000008861	RIF1	100	79.099	ENSNLEG00000010955	RIF1	99	79.099	Nomascus_leucogenys
ENSTSYG00000008861	RIF1	77	78.125	ENSMEUG00000007601	-	82	78.125	Notamacropus_eugenii
ENSTSYG00000008861	RIF1	100	68.637	ENSODEG00000003950	RIF1	99	68.918	Octodon_degus
ENSTSYG00000008861	RIF1	64	49.240	ENSONIG00000013657	rif1	60	46.345	Oreochromis_niloticus
ENSTSYG00000008861	RIF1	72	69.962	ENSOANG00000006078	-	77	69.962	Ornithorhynchus_anatinus
ENSTSYG00000008861	RIF1	100	75.212	ENSOCUG00000017435	RIF1	99	75.212	Oryctolagus_cuniculus
ENSTSYG00000008861	RIF1	62	46.452	ENSORLG00020001302	rif1	68	46.371	Oryzias_latipes_hni
ENSTSYG00000008861	RIF1	61	46.613	ENSORLG00015000009	rif1	66	46.290	Oryzias_latipes_hsok
ENSTSYG00000008861	RIF1	62	46.989	ENSOMEG00000021513	rif1	68	46.810	Oryzias_melastigma
ENSTSYG00000008861	RIF1	100	77.751	ENSOGAG00000006141	RIF1	99	77.670	Otolemur_garnettii
ENSTSYG00000008861	RIF1	100	75.715	ENSOARG00000008930	RIF1	99	75.715	Ovis_aries
ENSTSYG00000008861	RIF1	100	80.073	ENSPPAG00000023754	RIF1	99	80.073	Pan_paniscus
ENSTSYG00000008861	RIF1	100	76.982	ENSPPRG00000003618	RIF1	99	76.982	Panthera_pardus
ENSTSYG00000008861	RIF1	100	77.022	ENSPTIG00000020652	RIF1	99	77.022	Panthera_tigris_altaica
ENSTSYG00000008861	RIF1	100	80.073	ENSPTRG00000012534	RIF1	99	80.073	Pan_troglodytes
ENSTSYG00000008861	RIF1	100	79.701	ENSPANG00000008525	RIF1	99	79.701	Papio_anubis
ENSTSYG00000008861	RIF1	73	52.266	ENSPKIG00000004267	rif1	67	52.266	Paramormyrops_kingsleyae
ENSTSYG00000008861	RIF1	69	43.537	ENSPMGG00000016141	rif1	84	41.969	Periophthalmus_magnuspinnatus
ENSTSYG00000008861	RIF1	99	68.801	ENSPEMG00000000446	Rif1	99	68.801	Peromyscus_maniculatus_bairdii
ENSTSYG00000008861	RIF1	97	68.675	ENSPCIG00000009185	RIF1	99	57.354	Phascolarctos_cinereus
ENSTSYG00000008861	RIF1	62	49.400	ENSPFOG00000017804	rif1	66	49.480	Poecilia_formosa
ENSTSYG00000008861	RIF1	58	52.298	ENSPFOG00000000554	-	64	52.206	Poecilia_formosa
ENSTSYG00000008861	RIF1	62	49.473	ENSPLAG00000017945	rif1	74	46.931	Poecilia_latipinna
ENSTSYG00000008861	RIF1	54	51.081	ENSPMEG00000006897	-	62	50.982	Poecilia_mexicana
ENSTSYG00000008861	RIF1	62	49.201	ENSPREG00000018052	rif1	65	52.377	Poecilia_reticulata
ENSTSYG00000008861	RIF1	100	79.742	ENSPPYG00000012846	RIF1	99	79.742	Pongo_abelii
ENSTSYG00000008861	RIF1	79	84.848	ENSPCAG00000009032	RIF1	77	84.848	Procavia_capensis
ENSTSYG00000008861	RIF1	100	81.048	ENSPCOG00000027888	RIF1	99	81.048	Propithecus_coquereli
ENSTSYG00000008861	RIF1	93	77.189	ENSPVAG00000014276	RIF1	95	77.189	Pteropus_vampyrus
ENSTSYG00000008861	RIF1	65	47.522	ENSPNYG00000012940	rif1	70	47.522	Pundamilia_nyererei
ENSTSYG00000008861	RIF1	61	55.161	ENSPNAG00000016685	rif1	64	55.161	Pygocentrus_nattereri
ENSTSYG00000008861	RIF1	99	81.720	ENSRNOG00000054901	Rif1	97	81.720	Rattus_norvegicus
ENSTSYG00000008861	RIF1	100	78.862	ENSRBIG00000003704	RIF1	99	78.862	Rhinopithecus_bieti
ENSTSYG00000008861	RIF1	100	79.831	ENSRROG00000028206	RIF1	99	79.831	Rhinopithecus_roxellana
ENSTSYG00000008861	RIF1	100	80.124	ENSSBOG00000029530	RIF1	99	80.124	Saimiri_boliviensis_boliviensis
ENSTSYG00000008861	RIF1	99	57.698	ENSSHAG00000018552	RIF1	99	58.505	Sarcophilus_harrisii
ENSTSYG00000008861	RIF1	75	54.762	ENSSFOG00015021539	rif1	80	54.762	Scleropages_formosus
ENSTSYG00000008861	RIF1	62	49.235	ENSSMAG00000011704	rif1	63	49.235	Scophthalmus_maximus
ENSTSYG00000008861	RIF1	62	49.269	ENSSDUG00000015632	rif1	71	47.896	Seriola_dumerili
ENSTSYG00000008861	RIF1	62	83.618	ENSSARG00000007161	-	64	83.618	Sorex_araneus
ENSTSYG00000008861	RIF1	89	71.171	ENSSPUG00000003062	RIF1	94	71.171	Sphenodon_punctatus
ENSTSYG00000008861	RIF1	100	76.802	ENSSSCG00000016395	RIF1	99	76.802	Sus_scrofa
ENSTSYG00000008861	RIF1	63	47.696	ENSTRUG00000015808	rif1	71	47.696	Takifugu_rubripes
ENSTSYG00000008861	RIF1	62	51.360	ENSTNIG00000011538	rif1	67	51.360	Tetraodon_nigroviridis
ENSTSYG00000008861	RIF1	83	91.667	ENSTBEG00000016082	RIF1	82	91.667	Tupaia_belangeri
ENSTSYG00000008861	RIF1	100	77.827	ENSTTRG00000011190	RIF1	99	77.827	Tursiops_truncatus
ENSTSYG00000008861	RIF1	93	79.135	ENSUAMG00000026385	RIF1	99	79.091	Ursus_americanus
ENSTSYG00000008861	RIF1	100	78.203	ENSUMAG00000000337	RIF1	99	78.163	Ursus_maritimus
ENSTSYG00000008861	RIF1	100	75.191	ENSVPAG00000002162	RIF1	99	75.151	Vicugna_pacos
ENSTSYG00000008861	RIF1	100	76.068	ENSVVUG00000011293	RIF1	99	76.027	Vulpes_vulpes
ENSTSYG00000008861	RIF1	84	63.222	ENSXETG00000004530	rif1	84	63.222	Xenopus_tropicalis
ENSTSYG00000008861	RIF1	62	46.523	ENSXMAG00000000506	rif1	63	46.592	Xiphophorus_maculatus