EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000008868 (Gene tree)
Gene ID: 103268679
Gene Symbol: PUM1
Alias: -
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Plus strand
Length: 148560 bases
Position: chrKE944055.1:5508-154067
Accession: 103268679
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000015478	PUF	PF00806.19	2.5e-71	1	8
ENSTSYP00000015478	PUF	PF00806.19	2.5e-71	2	8
ENSTSYP00000015478	PUF	PF00806.19	2.5e-71	3	8
ENSTSYP00000015478	PUF	PF00806.19	2.5e-71	4	8
ENSTSYP00000015478	PUF	PF00806.19	2.5e-71	5	8
ENSTSYP00000015478	PUF	PF00806.19	2.5e-71	6	8
ENSTSYP00000015478	PUF	PF00806.19	2.5e-71	7	8
ENSTSYP00000015478	PUF	PF00806.19	2.5e-71	8	8
ENSTSYP00000021269	PUF	PF00806.19	3.9e-70	1	8
ENSTSYP00000021269	PUF	PF00806.19	3.9e-70	2	8
ENSTSYP00000021269	PUF	PF00806.19	3.9e-70	3	8
ENSTSYP00000021269	PUF	PF00806.19	3.9e-70	4	8
ENSTSYP00000021269	PUF	PF00806.19	3.9e-70	5	8
ENSTSYP00000021269	PUF	PF00806.19	3.9e-70	6	8
ENSTSYP00000021269	PUF	PF00806.19	3.9e-70	7	8
ENSTSYP00000021269	PUF	PF00806.19	3.9e-70	8	8
ENSTSYP00000019088	PUF	PF00806.19	1.4e-61	1	7
ENSTSYP00000019088	PUF	PF00806.19	1.4e-61	2	7
ENSTSYP00000019088	PUF	PF00806.19	1.4e-61	3	7
ENSTSYP00000019088	PUF	PF00806.19	1.4e-61	4	7
ENSTSYP00000019088	PUF	PF00806.19	1.4e-61	5	7
ENSTSYP00000019088	PUF	PF00806.19	1.4e-61	6	7
ENSTSYP00000019088	PUF	PF00806.19	1.4e-61	7	7
ENSTSYP00000008168	PUF	PF00806.19	2.5e-61	1	7
ENSTSYP00000008168	PUF	PF00806.19	2.5e-61	2	7
ENSTSYP00000008168	PUF	PF00806.19	2.5e-61	3	7
ENSTSYP00000008168	PUF	PF00806.19	2.5e-61	4	7
ENSTSYP00000008168	PUF	PF00806.19	2.5e-61	5	7
ENSTSYP00000008168	PUF	PF00806.19	2.5e-61	6	7
ENSTSYP00000008168	PUF	PF00806.19	2.5e-61	7	7

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000041047	PUM1-205	306	-	ENSTSYP00000018644	101 (aa)	-	UPI000C2F4C10
ENSTSYT00000008909	PUM1-202	3474	-	ENSTSYP00000008168	1157 (aa)	-	UPI000C2F666A
ENSTSYT00000026086	PUM1-203	3240	-	ENSTSYP00000019088	1079 (aa)	-	UPI000C2F67CA
ENSTSYT00000032194	PUM1-204	2835	-	ENSTSYP00000015478	944 (aa)	-	UPI000C2F4A76
ENSTSYT00000030353	PUM1-201	5454	XM_008066267	ENSTSYP00000021269	1189 (aa)	XP_008064458	A0A1U7U6U5

Gene Model

Click here to download ENSTSYG00000008868's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000008868's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000008868	PUM1	83	87.119	ENSTSYG00000014463	PUM2	99	88.862

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000008868	PUM1	100	99.682	ENSG00000134644	PUM1	100	100.000	Homo_sapiens
ENSTSYG00000008868	PUM1	100	82.410	ENSAPOG00000021632	pum1	100	91.084	Acanthochromis_polyacanthus
ENSTSYG00000008868	PUM1	100	99.306	ENSAMEG00000017656	PUM1	97	99.076	Ailuropoda_melanoleuca
ENSTSYG00000008868	PUM1	100	81.928	ENSACIG00000021013	pum1	100	76.427	Amphilophus_citrinellus
ENSTSYG00000008868	PUM1	100	82.410	ENSAOCG00000003944	pum1	100	91.084	Amphiprion_ocellaris
ENSTSYG00000008868	PUM1	100	82.410	ENSAPEG00000014550	pum1	100	91.084	Amphiprion_percula
ENSTSYG00000008868	PUM1	100	82.410	ENSATEG00000016004	pum1	100	91.084	Anabas_testudineus
ENSTSYG00000008868	PUM1	100	97.761	ENSAPLG00000009351	PUM1	100	97.393	Anas_platyrhynchos
ENSTSYG00000008868	PUM1	100	96.389	ENSACAG00000000682	PUM1	98	95.458	Anolis_carolinensis
ENSTSYG00000008868	PUM1	100	99.470	ENSANAG00000027865	PUM1	100	99.470	Aotus_nancymaae
ENSTSYG00000008868	PUM1	89	81.928	ENSACLG00000019354	pum1	100	78.743	Astatotilapia_calliptera
ENSTSYG00000008868	PUM1	100	84.491	ENSAMXG00000020607	pum1	92	83.575	Astyanax_mexicanus
ENSTSYG00000008868	PUM1	100	99.306	ENSBTAG00000018979	PUM1	100	99.758	Bos_taurus
ENSTSYG00000008868	PUM1	100	99.470	ENSCJAG00000006035	PUM1	100	99.517	Callithrix_jacchus
ENSTSYG00000008868	PUM1	100	99.306	ENSCAFG00000011205	PUM1	100	96.888	Canis_familiaris
ENSTSYG00000008868	PUM1	92	97.179	ENSCAFG00020024616	PUM1	99	98.482	Canis_lupus_dingo
ENSTSYG00000008868	PUM1	100	99.306	ENSCHIG00000012952	PUM1	100	99.275	Capra_hircus
ENSTSYG00000008868	PUM1	100	98.991	ENSCPOG00000031613	PUM1	100	98.991	Cavia_porcellus
ENSTSYG00000008868	PUM1	100	99.682	ENSCATG00000017991	PUM1	100	100.000	Cercocebus_atys
ENSTSYG00000008868	PUM1	100	99.075	ENSCLAG00000007662	PUM1	100	99.075	Chinchilla_lanigera
ENSTSYG00000008868	PUM1	100	99.306	ENSCSAG00000001028	PUM1	100	98.750	Chlorocebus_sabaeus
ENSTSYG00000008868	PUM1	99	96.121	ENSCHOG00000010245	PUM1	93	96.259	Choloepus_hoffmanni
ENSTSYG00000008868	PUM1	100	97.564	ENSCPBG00000009288	PUM1	100	98.068	Chrysemys_picta_bellii
ENSTSYG00000008868	PUM1	100	99.682	ENSCANG00000042606	PUM1	100	99.682	Colobus_angolensis_palliatus
ENSTSYG00000008868	PUM1	100	98.611	ENSCGRG00001024949	Pum1	100	98.611	Cricetulus_griseus_chok1gshd
ENSTSYG00000008868	PUM1	100	98.611	ENSCGRG00000014197	Pum1	100	98.611	Cricetulus_griseus_crigri
ENSTSYG00000008868	PUM1	90	76.111	ENSCSEG00000015981	pum1	100	77.706	Cynoglossus_semilaevis
ENSTSYG00000008868	PUM1	100	80.817	ENSCVAG00000007043	pum1	100	75.640	Cyprinodon_variegatus
ENSTSYG00000008868	PUM1	100	84.864	ENSDARG00000099256	pum1	100	79.532	Danio_rerio
ENSTSYG00000008868	PUM1	100	99.306	ENSDNOG00000010939	PUM1	100	99.075	Dasypus_novemcinctus
ENSTSYG00000008868	PUM1	85	99.034	ENSDORG00000001875	Pum1	100	99.034	Dipodomys_ordii
ENSTSYG00000008868	PUM1	85	100.000	ENSETEG00000004355	PUM1	87	93.561	Echinops_telfairi
ENSTSYG00000008868	PUM1	100	99.306	ENSEASG00005010813	PUM1	100	98.823	Equus_asinus_asinus
ENSTSYG00000008868	PUM1	100	98.823	ENSECAG00000021369	PUM1	100	98.823	Equus_caballus
ENSTSYG00000008868	PUM1	80	100.000	ENSEEUG00000003871	PUM1	74	100.000	Erinaceus_europaeus
ENSTSYG00000008868	PUM1	100	84.300	ENSELUG00000002409	pum1	100	83.560	Esox_lucius
ENSTSYG00000008868	PUM1	100	99.327	ENSFCAG00000010374	PUM1	100	99.758	Felis_catus
ENSTSYG00000008868	PUM1	100	96.415	ENSFALG00000001214	PUM1	97	94.891	Ficedula_albicollis
ENSTSYG00000008868	PUM1	100	98.991	ENSFDAG00000011319	PUM1	100	98.991	Fukomys_damarensis
ENSTSYG00000008868	PUM1	91	82.169	ENSGMOG00000010491	pum1	94	81.687	Gadus_morhua
ENSTSYG00000008868	PUM1	100	97.886	ENSGALG00000042598	PUM1	99	98.785	Gallus_gallus
ENSTSYG00000008868	PUM1	100	81.928	ENSGAFG00000015617	pum1	100	90.361	Gambusia_affinis
ENSTSYG00000008868	PUM1	100	82.169	ENSGACG00000005717	pum1	100	76.359	Gasterosteus_aculeatus
ENSTSYG00000008868	PUM1	100	97.388	ENSGAGG00000001290	PUM1	99	98.583	Gopherus_agassizii
ENSTSYG00000008868	PUM1	100	99.682	ENSGGOG00000011983	PUM1	100	99.682	Gorilla_gorilla
ENSTSYG00000008868	PUM1	100	81.928	ENSHBUG00000018718	pum1	100	76.218	Haplochromis_burtoni
ENSTSYG00000008868	PUM1	100	98.907	ENSHGLG00000013819	Pum1	100	98.907	Heterocephalus_glaber_female
ENSTSYG00000008868	PUM1	100	98.907	ENSHGLG00100008621	Pum1	100	98.907	Heterocephalus_glaber_male
ENSTSYG00000008868	PUM1	90	75.116	ENSHCOG00000005149	pum1	90	83.149	Hippocampus_comes
ENSTSYG00000008868	PUM1	100	82.850	ENSIPUG00000020421	pum1	100	80.000	Ictalurus_punctatus
ENSTSYG00000008868	PUM1	100	99.306	ENSSTOG00000010757	PUM1	100	99.306	Ictidomys_tridecemlineatus
ENSTSYG00000008868	PUM1	100	99.306	ENSJJAG00000000530	Pum1	100	99.306	Jaculus_jaculus
ENSTSYG00000008868	PUM1	100	81.687	ENSKMAG00000003481	pum1	100	75.805	Kryptolebias_marmoratus
ENSTSYG00000008868	PUM1	100	82.410	ENSLBEG00000002527	pum1	94	81.928	Labrus_bergylta
ENSTSYG00000008868	PUM1	100	88.476	ENSLACG00000017188	PUM1	99	86.428	Latimeria_chalumnae
ENSTSYG00000008868	PUM1	100	91.925	ENSLOCG00000005210	pum1	99	88.314	Lepisosteus_oculatus
ENSTSYG00000008868	PUM1	100	98.654	ENSLAFG00000003178	PUM1	100	98.654	Loxodonta_africana
ENSTSYG00000008868	PUM1	100	99.682	ENSMFAG00000010291	PUM1	100	100.000	Macaca_fascicularis
ENSTSYG00000008868	PUM1	100	99.682	ENSMMUG00000013520	PUM1	100	99.682	Macaca_mulatta
ENSTSYG00000008868	PUM1	100	99.682	ENSMNEG00000034639	PUM1	100	99.682	Macaca_nemestrina
ENSTSYG00000008868	PUM1	100	99.682	ENSMLEG00000038743	PUM1	100	99.682	Mandrillus_leucophaeus
ENSTSYG00000008868	PUM1	100	82.169	ENSMAMG00000011606	pum1	100	76.301	Mastacembelus_armatus
ENSTSYG00000008868	PUM1	100	87.212	ENSMZEG00005005834	pum1	93	86.701	Maylandia_zebra
ENSTSYG00000008868	PUM1	100	97.512	ENSMGAG00000000724	PUM1	100	97.309	Meleagris_gallopavo
ENSTSYG00000008868	PUM1	100	98.738	ENSMAUG00000022090	Pum1	100	98.738	Mesocricetus_auratus
ENSTSYG00000008868	PUM1	99	97.183	ENSMICG00000012213	-	99	97.136	Microcebus_murinus
ENSTSYG00000008868	PUM1	100	99.327	ENSMICG00000007713	-	100	99.327	Microcebus_murinus
ENSTSYG00000008868	PUM1	100	98.654	ENSMOCG00000015463	Pum1	100	98.654	Microtus_ochrogaster
ENSTSYG00000008868	PUM1	90	88.276	ENSMMOG00000019817	pum1	100	90.843	Mola_mola
ENSTSYG00000008868	PUM1	100	97.481	ENSMODG00000017067	PUM1	100	97.481	Monodelphis_domestica
ENSTSYG00000008868	PUM1	90	88.506	ENSMALG00000016399	pum1	100	91.084	Monopterus_albus
ENSTSYG00000008868	PUM1	100	98.402	MGP_CAROLIEiJ_G0026549	Pum1	100	98.402	Mus_caroli
ENSTSYG00000008868	PUM1	100	98.654	ENSMUSG00000028580	Pum1	100	98.654	Mus_musculus
ENSTSYG00000008868	PUM1	100	98.611	MGP_PahariEiJ_G0028881	Pum1	100	98.611	Mus_pahari
ENSTSYG00000008868	PUM1	100	98.611	MGP_SPRETEiJ_G0027529	Pum1	100	98.611	Mus_spretus
ENSTSYG00000008868	PUM1	100	99.306	ENSMPUG00000015454	PUM1	100	98.907	Mustela_putorius_furo
ENSTSYG00000008868	PUM1	100	99.306	ENSMLUG00000006490	PUM1	100	98.907	Myotis_lucifugus
ENSTSYG00000008868	PUM1	100	99.047	ENSNGAG00000002378	Pum1	100	99.047	Nannospalax_galili
ENSTSYG00000008868	PUM1	100	78.556	ENSNBRG00000010689	pum1	100	83.231	Neolamprologus_brichardi
ENSTSYG00000008868	PUM1	100	98.611	ENSNLEG00000001151	PUM1	100	98.611	Nomascus_leucogenys
ENSTSYG00000008868	PUM1	84	96.622	ENSMEUG00000000976	-	82	96.622	Notamacropus_eugenii
ENSTSYG00000008868	PUM1	84	100.000	ENSOPRG00000001776	PUM1	73	100.000	Ochotona_princeps
ENSTSYG00000008868	PUM1	100	98.823	ENSODEG00000003465	PUM1	100	98.823	Octodon_degus
ENSTSYG00000008868	PUM1	100	82.169	ENSONIG00000002290	pum1	100	76.548	Oreochromis_niloticus
ENSTSYG00000008868	PUM1	80	82.885	ENSOANG00000004902	-	100	77.664	Ornithorhynchus_anatinus
ENSTSYG00000008868	PUM1	100	99.306	ENSOCUG00000008641	PUM1	99	98.570	Oryctolagus_cuniculus
ENSTSYG00000008868	PUM1	100	83.855	ENSORLG00000011482	pum1	100	77.056	Oryzias_latipes
ENSTSYG00000008868	PUM1	100	83.855	ENSORLG00020019461	pum1	100	76.049	Oryzias_latipes_hni
ENSTSYG00000008868	PUM1	100	83.855	ENSORLG00015011375	pum1	100	76.049	Oryzias_latipes_hsok
ENSTSYG00000008868	PUM1	89	71.900	ENSOMEG00000009312	pum1	100	73.054	Oryzias_melastigma
ENSTSYG00000008868	PUM1	100	98.611	ENSOGAG00000011063	PUM1	100	96.641	Otolemur_garnettii
ENSTSYG00000008868	PUM1	100	99.306	ENSOARG00000001899	PUM1	100	99.275	Ovis_aries
ENSTSYG00000008868	PUM1	100	99.682	ENSPPAG00000044003	PUM1	100	99.682	Pan_paniscus
ENSTSYG00000008868	PUM1	100	99.306	ENSPPRG00000001370	PUM1	100	99.306	Panthera_pardus
ENSTSYG00000008868	PUM1	100	99.306	ENSPTIG00000010798	PUM1	100	99.306	Panthera_tigris_altaica
ENSTSYG00000008868	PUM1	100	99.682	ENSPTRG00000000453	PUM1	100	99.682	Pan_troglodytes
ENSTSYG00000008868	PUM1	100	99.682	ENSPANG00000016338	PUM1	100	100.000	Papio_anubis
ENSTSYG00000008868	PUM1	100	82.864	ENSPKIG00000010578	pum1	100	78.401	Paramormyrops_kingsleyae
ENSTSYG00000008868	PUM1	100	97.880	ENSPSIG00000014118	PUM1	100	97.561	Pelodiscus_sinensis
ENSTSYG00000008868	PUM1	100	76.923	ENSPMGG00000005836	pum1	100	81.174	Periophthalmus_magnuspinnatus
ENSTSYG00000008868	PUM1	100	98.823	ENSPEMG00000010009	Pum1	100	98.823	Peromyscus_maniculatus_bairdii
ENSTSYG00000008868	PUM1	100	97.637	ENSPCIG00000014151	PUM1	100	98.068	Phascolarctos_cinereus
ENSTSYG00000008868	PUM1	93	83.744	ENSPFOG00000007289	pum1	99	82.263	Poecilia_formosa
ENSTSYG00000008868	PUM1	100	82.840	ENSPLAG00000007256	pum1	100	77.950	Poecilia_latipinna
ENSTSYG00000008868	PUM1	89	81.928	ENSPMEG00000019543	pum1	99	78.217	Poecilia_mexicana
ENSTSYG00000008868	PUM1	100	81.928	ENSPREG00000005195	pum1	100	80.751	Poecilia_reticulata
ENSTSYG00000008868	PUM1	100	99.377	ENSPPYG00000001621	PUM1	100	97.609	Pongo_abelii
ENSTSYG00000008868	PUM1	83	98.347	ENSPCAG00000001979	PUM1	74	99.383	Procavia_capensis
ENSTSYG00000008868	PUM1	100	99.327	ENSPCOG00000004398	PUM1	100	99.327	Propithecus_coquereli
ENSTSYG00000008868	PUM1	100	99.306	ENSPVAG00000005207	PUM1	97	97.056	Pteropus_vampyrus
ENSTSYG00000008868	PUM1	100	81.928	ENSPNYG00000009518	pum1	100	86.701	Pundamilia_nyererei
ENSTSYG00000008868	PUM1	100	83.816	ENSPNAG00000026728	pum1	100	80.501	Pygocentrus_nattereri
ENSTSYG00000008868	PUM1	100	98.611	ENSRNOG00000011709	Pum1	100	98.402	Rattus_norvegicus
ENSTSYG00000008868	PUM1	100	99.682	ENSRBIG00000042521	PUM1	100	100.000	Rhinopithecus_bieti
ENSTSYG00000008868	PUM1	100	99.682	ENSRROG00000020156	PUM1	100	99.682	Rhinopithecus_roxellana
ENSTSYG00000008868	PUM1	100	99.576	ENSSBOG00000032037	PUM1	100	99.576	Saimiri_boliviensis_boliviensis
ENSTSYG00000008868	PUM1	100	97.397	ENSSHAG00000010918	PUM1	100	97.397	Sarcophilus_harrisii
ENSTSYG00000008868	PUM1	100	82.410	ENSSMAG00000010918	pum1	100	91.084	Scophthalmus_maximus
ENSTSYG00000008868	PUM1	100	82.410	ENSSDUG00000009021	pum1	100	76.548	Seriola_dumerili
ENSTSYG00000008868	PUM1	100	81.188	ENSSLDG00000009667	pum1	100	78.468	Seriola_lalandi_dorsalis
ENSTSYG00000008868	PUM1	99	99.306	ENSSARG00000003055	PUM1	91	99.558	Sorex_araneus
ENSTSYG00000008868	PUM1	100	97.758	ENSSPUG00000006267	PUM1	100	96.888	Sphenodon_punctatus
ENSTSYG00000008868	PUM1	100	82.410	ENSSPAG00000016636	pum1	100	91.084	Stegastes_partitus
ENSTSYG00000008868	PUM1	100	99.411	ENSSSCG00000003591	PUM1	100	99.758	Sus_scrofa
ENSTSYG00000008868	PUM1	100	82.410	ENSTRUG00000013121	pum1	100	83.107	Takifugu_rubripes
ENSTSYG00000008868	PUM1	100	82.212	ENSTNIG00000016983	pum1	99	76.617	Tetraodon_nigroviridis
ENSTSYG00000008868	PUM1	90	96.341	ENSTBEG00000013810	PUM1	89	96.341	Tupaia_belangeri
ENSTSYG00000008868	PUM1	92	98.997	ENSTTRG00000007436	PUM1	90	98.997	Tursiops_truncatus
ENSTSYG00000008868	PUM1	99	98.618	ENSUAMG00000018262	-	100	98.618	Ursus_americanus
ENSTSYG00000008868	PUM1	100	95.315	ENSUMAG00000009211	PUM1	100	99.758	Ursus_maritimus
ENSTSYG00000008868	PUM1	100	99.004	ENSVPAG00000005902	PUM1	92	99.322	Vicugna_pacos
ENSTSYG00000008868	PUM1	100	99.306	ENSVVUG00000014631	PUM1	100	99.758	Vulpes_vulpes
ENSTSYG00000008868	PUM1	100	88.944	ENSXETG00000012904	pum1	99	86.734	Xenopus_tropicalis
ENSTSYG00000008868	PUM1	100	81.928	ENSXMAG00000002945	pum1	100	77.743	Xiphophorus_maculatus