EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTSYG00000009214 (Gene tree)
Gene ID: 103265415
Gene Symbol: SF3B1
Alias: -
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Plus strand
Length: 41762 bases
Position: chrKE942063.1:425556-467317
Accession: 103265415
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000008467	SF3b1	PF08920.10	4.6e-47	1	1
ENSTSYP00000027346	SF3b1	PF08920.10	4.6e-47	1	1
ENSTSYP00000034534	SF3b1	PF08920.10	4.6e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000042837	SF3B1-203	462	-	ENSTSYP00000028089	153 (aa)	-	UPI000C2F565A
ENSTSYT00000027792	SF3B1-206	5111	XM_021715017	ENSTSYP00000032838	74 (aa)	XP_021570692	UPI00004C968D
ENSTSYT00000031036	SF3B1-202	435	-	ENSTSYP00000027503	144 (aa)	XP_021570693	UPI0000141947
ENSTSYT00000050025	SF3B1-201	4310	XM_008063084	ENSTSYP00000027346	1304 (aa)	XP_008061275	A0A1U7TTU4
ENSTSYT00000009225	SF3B1-204	3912	-	ENSTSYP00000008467	1303 (aa)	-	UPI000C2F3A84
ENSTSYT00000042722	SF3B1-205	3921	-	ENSTSYP00000034534	1306 (aa)	-	UPI000C2F3075

Gene Model

Click here to download ENSTSYG00000009214's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000009214's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000009214	SF3B1	100	99.923	ENSG00000115524	SF3B1	100	100.000	Homo_sapiens
ENSTSYG00000009214	SF3B1	100	93.546	ENSAPOG00000011894	sf3b1	100	93.546	Acanthochromis_polyacanthus
ENSTSYG00000009214	SF3B1	99	99.846	ENSAMEG00000013809	SF3B1	99	99.846	Ailuropoda_melanoleuca
ENSTSYG00000009214	SF3B1	100	93.140	ENSACIG00000020910	sf3b1	97	92.988	Amphilophus_citrinellus
ENSTSYG00000009214	SF3B1	100	93.546	ENSAOCG00000004478	sf3b1	100	93.546	Amphiprion_ocellaris
ENSTSYG00000009214	SF3B1	100	93.546	ENSAPEG00000012937	sf3b1	100	93.546	Amphiprion_percula
ENSTSYG00000009214	SF3B1	100	93.617	ENSATEG00000020435	sf3b1	100	93.617	Anabas_testudineus
ENSTSYG00000009214	SF3B1	99	99.305	ENSAPLG00000003993	SF3B1	99	99.305	Anas_platyrhynchos
ENSTSYG00000009214	SF3B1	100	98.773	ENSACAG00000009612	SF3B1	100	98.773	Anolis_carolinensis
ENSTSYG00000009214	SF3B1	100	99.923	ENSANAG00000021577	SF3B1	100	99.923	Aotus_nancymaae
ENSTSYG00000009214	SF3B1	100	92.781	ENSACLG00000023470	sf3b1	100	92.629	Astatotilapia_calliptera
ENSTSYG00000009214	SF3B1	100	94.073	ENSAMXG00000002219	sf3b1	100	93.921	Astyanax_mexicanus
ENSTSYG00000009214	SF3B1	100	99.847	ENSBTAG00000008915	SF3B1	100	99.847	Bos_taurus
ENSTSYG00000009214	SF3B1	98	66.365	WBGene00011605	sftb-1	98	66.440	Caenorhabditis_elegans
ENSTSYG00000009214	SF3B1	100	99.923	ENSCJAG00000003902	SF3B1	100	99.923	Callithrix_jacchus
ENSTSYG00000009214	SF3B1	100	99.923	ENSCAFG00000010826	SF3B1	100	99.923	Canis_familiaris
ENSTSYG00000009214	SF3B1	100	99.923	ENSCAFG00020004750	SF3B1	100	99.923	Canis_lupus_dingo
ENSTSYG00000009214	SF3B1	100	99.847	ENSCHIG00000015226	SF3B1	100	99.847	Capra_hircus
ENSTSYG00000009214	SF3B1	99	99.923	ENSCAPG00000006547	SF3B1	99	99.923	Cavia_aperea
ENSTSYG00000009214	SF3B1	99	99.923	ENSCPOG00000009353	SF3B1	100	99.923	Cavia_porcellus
ENSTSYG00000009214	SF3B1	100	99.923	ENSCCAG00000020506	SF3B1	100	99.923	Cebus_capucinus
ENSTSYG00000009214	SF3B1	100	99.923	ENSCATG00000035735	SF3B1	100	99.923	Cercocebus_atys
ENSTSYG00000009214	SF3B1	99	99.923	ENSCLAG00000014767	SF3B1	99	99.923	Chinchilla_lanigera
ENSTSYG00000009214	SF3B1	100	99.923	ENSCSAG00000011505	SF3B1	100	99.923	Chlorocebus_sabaeus
ENSTSYG00000009214	SF3B1	76	98.462	ENSCHOG00000009860	SF3B1	76	98.438	Choloepus_hoffmanni
ENSTSYG00000009214	SF3B1	100	99.156	ENSCPBG00000021902	SF3B1	100	99.156	Chrysemys_picta_bellii
ENSTSYG00000009214	SF3B1	68	78.060	ENSCING00000002558	-	99	78.771	Ciona_intestinalis
ENSTSYG00000009214	SF3B1	99	80.092	ENSCSAVG00000002559	-	99	79.695	Ciona_savignyi
ENSTSYG00000009214	SF3B1	100	99.923	ENSCANG00000029415	SF3B1	100	99.923	Colobus_angolensis_palliatus
ENSTSYG00000009214	SF3B1	100	99.923	ENSCGRG00001016990	Sf3b1	100	99.923	Cricetulus_griseus_chok1gshd
ENSTSYG00000009214	SF3B1	100	99.923	ENSCGRG00000005301	Sf3b1	100	99.923	Cricetulus_griseus_crigri
ENSTSYG00000009214	SF3B1	100	89.939	ENSCSEG00000003860	sf3b1	100	89.863	Cynoglossus_semilaevis
ENSTSYG00000009214	SF3B1	96	93.597	ENSCVAG00000003680	sf3b1	99	93.597	Cyprinodon_variegatus
ENSTSYG00000009214	SF3B1	100	93.394	ENSDARG00000056138	sf3b1	100	93.318	Danio_rerio
ENSTSYG00000009214	SF3B1	100	99.847	ENSDNOG00000011754	SF3B1	100	99.847	Dasypus_novemcinctus
ENSTSYG00000009214	SF3B1	99	97.220	ENSDORG00000002399	Sf3b1	100	97.220	Dipodomys_ordii
ENSTSYG00000009214	SF3B1	100	76.544	FBgn0031266	Sf3b1	100	76.544	Drosophila_melanogaster
ENSTSYG00000009214	SF3B1	83	99.258	ENSETEG00000009188	SF3B1	100	99.258	Echinops_telfairi
ENSTSYG00000009214	SF3B1	99	87.193	ENSEBUG00000004325	sf3b1	100	90.104	Eptatretus_burgeri
ENSTSYG00000009214	SF3B1	100	99.847	ENSEASG00005020159	SF3B1	98	99.847	Equus_asinus_asinus
ENSTSYG00000009214	SF3B1	100	99.847	ENSECAG00000021657	SF3B1	98	99.847	Equus_caballus
ENSTSYG00000009214	SF3B1	87	100.000	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSTSYG00000009214	SF3B1	100	93.057	ENSELUG00000005977	sf3b1	98	92.906	Esox_lucius
ENSTSYG00000009214	SF3B1	100	99.923	ENSFCAG00000005038	SF3B1	100	99.923	Felis_catus
ENSTSYG00000009214	SF3B1	99	99.382	ENSFALG00000004281	SF3B1	99	99.382	Ficedula_albicollis
ENSTSYG00000009214	SF3B1	100	99.923	ENSFDAG00000017510	SF3B1	100	99.923	Fukomys_damarensis
ENSTSYG00000009214	SF3B1	100	92.863	ENSFHEG00000014333	sf3b1	100	92.863	Fundulus_heteroclitus
ENSTSYG00000009214	SF3B1	100	93.455	ENSGMOG00000006773	sf3b1	100	93.455	Gadus_morhua
ENSTSYG00000009214	SF3B1	100	99.310	ENSGALG00000008038	SF3B1	100	99.310	Gallus_gallus
ENSTSYG00000009214	SF3B1	100	91.838	ENSGAFG00000000704	sf3b1	99	93.364	Gambusia_affinis
ENSTSYG00000009214	SF3B1	100	93.598	ENSGACG00000008839	sf3b1	100	93.598	Gasterosteus_aculeatus
ENSTSYG00000009214	SF3B1	100	98.477	ENSGAGG00000017478	SF3B1	100	98.477	Gopherus_agassizii
ENSTSYG00000009214	SF3B1	99	93.093	ENSGGOG00000009264	SF3B1	100	93.865	Gorilla_gorilla
ENSTSYG00000009214	SF3B1	99	92.846	ENSHBUG00000007705	sf3b1	99	92.694	Haplochromis_burtoni
ENSTSYG00000009214	SF3B1	99	99.923	ENSHGLG00000008285	-	99	99.923	Heterocephalus_glaber_female
ENSTSYG00000009214	SF3B1	99	97.915	ENSHGLG00100005535	-	99	97.915	Heterocephalus_glaber_male
ENSTSYG00000009214	SF3B1	100	92.900	ENSHCOG00000016775	sf3b1	100	92.749	Hippocampus_comes
ENSTSYG00000009214	SF3B1	100	93.921	ENSIPUG00000013171	sf3b1	100	93.921	Ictalurus_punctatus
ENSTSYG00000009214	SF3B1	100	99.923	ENSSTOG00000011034	SF3B1	100	99.923	Ictidomys_tridecemlineatus
ENSTSYG00000009214	SF3B1	99	99.845	ENSJJAG00000010903	Sf3b1	99	99.845	Jaculus_jaculus
ENSTSYG00000009214	SF3B1	100	93.030	ENSKMAG00000004009	sf3b1	100	92.955	Kryptolebias_marmoratus
ENSTSYG00000009214	SF3B1	100	93.511	ENSLBEG00000022208	sf3b1	100	93.359	Labrus_bergylta
ENSTSYG00000009214	SF3B1	99	92.414	ENSLACG00000014832	SF3B1	99	92.414	Latimeria_chalumnae
ENSTSYG00000009214	SF3B1	100	94.841	ENSLOCG00000003899	sf3b1	100	94.689	Lepisosteus_oculatus
ENSTSYG00000009214	SF3B1	100	99.923	ENSLAFG00000001956	SF3B1	100	99.923	Loxodonta_africana
ENSTSYG00000009214	SF3B1	99	99.923	ENSMMUG00000022430	SF3B1	99	99.923	Macaca_mulatta
ENSTSYG00000009214	SF3B1	100	99.923	ENSMNEG00000042333	SF3B1	100	99.923	Macaca_nemestrina
ENSTSYG00000009214	SF3B1	95	93.398	ENSMLEG00000026141	SF3B1	99	93.947	Mandrillus_leucophaeus
ENSTSYG00000009214	SF3B1	100	93.541	ENSMAMG00000010241	sf3b1	100	93.541	Mastacembelus_armatus
ENSTSYG00000009214	SF3B1	100	92.781	ENSMZEG00005021254	sf3b1	100	92.629	Maylandia_zebra
ENSTSYG00000009214	SF3B1	99	98.687	ENSMGAG00000007017	SF3B1	99	98.687	Meleagris_gallopavo
ENSTSYG00000009214	SF3B1	99	95.676	ENSMAUG00000009071	Sf3b1	99	95.676	Mesocricetus_auratus
ENSTSYG00000009214	SF3B1	100	99.847	ENSMICG00000013879	SF3B1	100	99.847	Microcebus_murinus
ENSTSYG00000009214	SF3B1	99	95.521	ENSMOCG00000000455	Sf3b1	99	95.521	Microtus_ochrogaster
ENSTSYG00000009214	SF3B1	84	92.968	ENSMMOG00000000475	sf3b1	100	92.968	Mola_mola
ENSTSYG00000009214	SF3B1	100	99.233	ENSMODG00000012275	SF3B1	100	99.233	Monodelphis_domestica
ENSTSYG00000009214	SF3B1	100	93.465	ENSMALG00000017211	sf3b1	100	93.465	Monopterus_albus
ENSTSYG00000009214	SF3B1	100	99.923	MGP_CAROLIEiJ_G0014141	Sf3b1	100	99.923	Mus_caroli
ENSTSYG00000009214	SF3B1	100	99.923	ENSMUSG00000025982	Sf3b1	100	99.923	Mus_musculus
ENSTSYG00000009214	SF3B1	100	99.923	MGP_SPRETEiJ_G0014947	Sf3b1	100	99.923	Mus_spretus
ENSTSYG00000009214	SF3B1	100	99.923	ENSMPUG00000007799	SF3B1	100	99.923	Mustela_putorius_furo
ENSTSYG00000009214	SF3B1	100	98.696	ENSMLUG00000000840	SF3B1	100	98.696	Myotis_lucifugus
ENSTSYG00000009214	SF3B1	99	99.846	ENSNGAG00000021884	-	100	99.692	Nannospalax_galili
ENSTSYG00000009214	SF3B1	100	89.033	ENSNBRG00000015816	sf3b1	100	89.033	Neolamprologus_brichardi
ENSTSYG00000009214	SF3B1	100	99.923	ENSNLEG00000006861	SF3B1	100	99.923	Nomascus_leucogenys
ENSTSYG00000009214	SF3B1	70	100.000	ENSMEUG00000015848	-	67	100.000	Notamacropus_eugenii
ENSTSYG00000009214	SF3B1	100	88.037	ENSOPRG00000008596	SF3B1	100	88.037	Ochotona_princeps
ENSTSYG00000009214	SF3B1	100	99.923	ENSODEG00000011153	-	100	99.923	Octodon_degus
ENSTSYG00000009214	SF3B1	100	92.781	ENSONIG00000013758	sf3b1	100	92.629	Oreochromis_niloticus
ENSTSYG00000009214	SF3B1	83	98.893	ENSOCUG00000012722	-	96	98.893	Oryctolagus_cuniculus
ENSTSYG00000009214	SF3B1	100	93.313	ENSORLG00000020219	sf3b1	100	93.313	Oryzias_latipes
ENSTSYG00000009214	SF3B1	100	93.313	ENSORLG00020001746	sf3b1	100	93.313	Oryzias_latipes_hni
ENSTSYG00000009214	SF3B1	64	90.952	ENSORLG00015001759	sf3b1	98	90.952	Oryzias_latipes_hsok
ENSTSYG00000009214	SF3B1	100	93.318	ENSOMEG00000019231	sf3b1	100	93.318	Oryzias_melastigma
ENSTSYG00000009214	SF3B1	100	99.847	ENSOARG00000015374	SF3B1	100	99.847	Ovis_aries
ENSTSYG00000009214	SF3B1	100	99.923	ENSPPAG00000035007	SF3B1	100	99.923	Pan_paniscus
ENSTSYG00000009214	SF3B1	100	99.923	ENSPPRG00000009090	SF3B1	100	99.923	Panthera_pardus
ENSTSYG00000009214	SF3B1	100	99.923	ENSPTIG00000021557	SF3B1	100	99.923	Panthera_tigris_altaica
ENSTSYG00000009214	SF3B1	99	91.378	ENSPTRG00000012771	SF3B1	100	91.028	Pan_troglodytes
ENSTSYG00000009214	SF3B1	100	99.923	ENSPANG00000013417	SF3B1	100	99.923	Papio_anubis
ENSTSYG00000009214	SF3B1	100	94.977	ENSPKIG00000000784	sf3b1	100	94.825	Paramormyrops_kingsleyae
ENSTSYG00000009214	SF3B1	99	97.913	ENSPSIG00000017222	SF3B1	98	97.913	Pelodiscus_sinensis
ENSTSYG00000009214	SF3B1	90	93.934	ENSPMGG00000004330	sf3b1	99	93.766	Periophthalmus_magnuspinnatus
ENSTSYG00000009214	SF3B1	99	99.923	ENSPEMG00000010699	Sf3b1	100	99.923	Peromyscus_maniculatus_bairdii
ENSTSYG00000009214	SF3B1	100	89.977	ENSPMAG00000001311	sf3b1	100	90.129	Petromyzon_marinus
ENSTSYG00000009214	SF3B1	100	99.156	ENSPCIG00000010642	SF3B1	100	99.156	Phascolarctos_cinereus
ENSTSYG00000009214	SF3B1	100	93.247	ENSPFOG00000000073	sf3b1	100	93.247	Poecilia_formosa
ENSTSYG00000009214	SF3B1	100	93.318	ENSPLAG00000002293	sf3b1	100	93.318	Poecilia_latipinna
ENSTSYG00000009214	SF3B1	100	93.318	ENSPMEG00000000446	sf3b1	98	93.318	Poecilia_mexicana
ENSTSYG00000009214	SF3B1	100	93.394	ENSPREG00000019652	sf3b1	100	93.394	Poecilia_reticulata
ENSTSYG00000009214	SF3B1	100	98.723	ENSPPYG00000013044	SF3B1	96	98.723	Pongo_abelii
ENSTSYG00000009214	SF3B1	100	99.770	ENSPCAG00000009292	SF3B1	100	99.770	Procavia_capensis
ENSTSYG00000009214	SF3B1	100	99.847	ENSPCOG00000024074	SF3B1	100	99.847	Propithecus_coquereli
ENSTSYG00000009214	SF3B1	100	99.923	ENSPVAG00000008302	SF3B1	100	99.923	Pteropus_vampyrus
ENSTSYG00000009214	SF3B1	100	92.705	ENSPNYG00000014939	sf3b1	100	92.553	Pundamilia_nyererei
ENSTSYG00000009214	SF3B1	100	93.921	ENSPNAG00000008288	sf3b1	100	93.921	Pygocentrus_nattereri
ENSTSYG00000009214	SF3B1	100	99.923	ENSRNOG00000013516	Sf3b1	100	99.923	Rattus_norvegicus
ENSTSYG00000009214	SF3B1	99	96.371	ENSRBIG00000026096	SF3B1	100	96.160	Rhinopithecus_bieti
ENSTSYG00000009214	SF3B1	100	99.923	ENSRROG00000031308	SF3B1	100	99.923	Rhinopithecus_roxellana
ENSTSYG00000009214	SF3B1	100	99.923	ENSSBOG00000020080	SF3B1	100	99.923	Saimiri_boliviensis_boliviensis
ENSTSYG00000009214	SF3B1	100	99.233	ENSSHAG00000017564	SF3B1	100	99.233	Sarcophilus_harrisii
ENSTSYG00000009214	SF3B1	100	94.533	ENSSFOG00015021535	sf3b1	100	94.685	Scleropages_formosus
ENSTSYG00000009214	SF3B1	99	92.879	ENSSMAG00000013977	sf3b1	99	92.727	Scophthalmus_maximus
ENSTSYG00000009214	SF3B1	100	93.313	ENSSDUG00000017422	sf3b1	100	93.313	Seriola_dumerili
ENSTSYG00000009214	SF3B1	100	93.237	ENSSLDG00000019495	sf3b1	100	93.237	Seriola_lalandi_dorsalis
ENSTSYG00000009214	SF3B1	76	100.000	ENSSARG00000007016	SF3B1	76	100.000	Sorex_araneus
ENSTSYG00000009214	SF3B1	100	99.003	ENSSPUG00000000410	SF3B1	100	99.003	Sphenodon_punctatus
ENSTSYG00000009214	SF3B1	100	93.617	ENSSPAG00000010451	sf3b1	99	93.617	Stegastes_partitus
ENSTSYG00000009214	SF3B1	91	99.495	ENSSSCG00000016075	SF3B1	100	99.914	Sus_scrofa
ENSTSYG00000009214	SF3B1	100	99.233	ENSTGUG00000010553	SF3B1	100	99.233	Taeniopygia_guttata
ENSTSYG00000009214	SF3B1	100	93.313	ENSTRUG00000015534	sf3b1	100	93.161	Takifugu_rubripes
ENSTSYG00000009214	SF3B1	88	100.000	ENSTBEG00000008714	SF3B1	93	100.000	Tupaia_belangeri
ENSTSYG00000009214	SF3B1	92	94.058	ENSTTRG00000003414	SF3B1	92	94.058	Tursiops_truncatus
ENSTSYG00000009214	SF3B1	94	95.688	ENSUAMG00000018506	SF3B1	99	98.988	Ursus_americanus
ENSTSYG00000009214	SF3B1	100	99.923	ENSUMAG00000020945	SF3B1	100	99.923	Ursus_maritimus
ENSTSYG00000009214	SF3B1	100	91.794	ENSVPAG00000005798	SF3B1	100	91.794	Vicugna_pacos
ENSTSYG00000009214	SF3B1	100	99.923	ENSVVUG00000025948	SF3B1	95	99.923	Vulpes_vulpes
ENSTSYG00000009214	SF3B1	100	96.552	ENSXETG00000013339	sf3b1	100	96.552	Xenopus_tropicalis
ENSTSYG00000009214	SF3B1	100	89.832	ENSXCOG00000018086	sf3b1	100	89.718	Xiphophorus_couchianus
ENSTSYG00000009214	SF3B1	100	93.318	ENSXMAG00000007369	sf3b1	100	93.615	Xiphophorus_maculatus