EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000009248 (Gene tree)
Gene ID: 103257741
Gene Symbol: PRDM4
Alias: -
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Minus strand
Length: 28300 bases
Position: chrKE938243.1:50902-79201
Accession: 103257741
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000008494	zf-C2H2	PF00096.26	3.8e-19	1	2
ENSTSYP00000008494	zf-C2H2	PF00096.26	3.8e-19	2	2
ENSTSYP00000008494	zf-met	PF12874.7	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000009252	PRDM4-201	2938	XM_008055439	ENSTSYP00000008494	801 (aa)	XP_008053630	A0A1U7T765

Gene Model

Click here to download ENSTSYG00000009248's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000009248's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000009248	PRDM4	52	35.374	ENSTSYG00000000544	PRDM10	53	35.374

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000009248	PRDM4	100	97.628	ENSG00000110851	PRDM4	100	100.000	Homo_sapiens
ENSTSYG00000009248	PRDM4	99	97.497	ENSAMEG00000016174	PRDM4	99	97.497	Ailuropoda_melanoleuca
ENSTSYG00000009248	PRDM4	99	87.093	ENSAPLG00000009846	PRDM4	99	86.591	Anas_platyrhynchos
ENSTSYG00000009248	PRDM4	100	97.878	ENSANAG00000024800	PRDM4	100	97.878	Aotus_nancymaae
ENSTSYG00000009248	PRDM4	100	97.129	ENSBTAG00000012999	PRDM4	100	97.129	Bos_taurus
ENSTSYG00000009248	PRDM4	100	97.253	ENSCJAG00000015261	PRDM4	100	97.253	Callithrix_jacchus
ENSTSYG00000009248	PRDM4	100	97.503	ENSCAFG00000001788	PRDM4	100	97.503	Canis_familiaris
ENSTSYG00000009248	PRDM4	100	97.503	ENSCAFG00020004916	PRDM4	100	97.503	Canis_lupus_dingo
ENSTSYG00000009248	PRDM4	100	97.004	ENSCHIG00000019409	PRDM4	100	97.004	Capra_hircus
ENSTSYG00000009248	PRDM4	99	90.738	ENSCAPG00000013937	PRDM4	99	90.738	Cavia_aperea
ENSTSYG00000009248	PRDM4	99	90.186	ENSCPOG00000022385	PRDM4	100	90.186	Cavia_porcellus
ENSTSYG00000009248	PRDM4	100	98.127	ENSCCAG00000036033	PRDM4	100	98.127	Cebus_capucinus
ENSTSYG00000009248	PRDM4	100	97.503	ENSCATG00000044797	PRDM4	100	97.503	Cercocebus_atys
ENSTSYG00000009248	PRDM4	99	92.289	ENSCLAG00000007545	PRDM4	100	92.662	Chinchilla_lanigera
ENSTSYG00000009248	PRDM4	100	97.503	ENSCSAG00000002896	PRDM4	100	97.503	Chlorocebus_sabaeus
ENSTSYG00000009248	PRDM4	76	98.182	ENSCHOG00000001744	PRDM4	86	98.182	Choloepus_hoffmanni
ENSTSYG00000009248	PRDM4	99	88.080	ENSCPBG00000023187	PRDM4	100	87.578	Chrysemys_picta_bellii
ENSTSYG00000009248	PRDM4	100	97.628	ENSCANG00000021804	PRDM4	100	97.628	Colobus_angolensis_palliatus
ENSTSYG00000009248	PRDM4	99	92.910	ENSCGRG00001015102	-	100	92.662	Cricetulus_griseus_chok1gshd
ENSTSYG00000009248	PRDM4	96	92.903	ENSCGRG00000004044	-	100	92.645	Cricetulus_griseus_crigri
ENSTSYG00000009248	PRDM4	100	96.380	ENSDNOG00000032478	PRDM4	100	96.380	Dasypus_novemcinctus
ENSTSYG00000009248	PRDM4	99	81.179	ENSDORG00000015081	-	100	81.430	Dipodomys_ordii
ENSTSYG00000009248	PRDM4	93	45.787	ENSEBUG00000003775	prdm4	99	45.908	Eptatretus_burgeri
ENSTSYG00000009248	PRDM4	100	97.503	ENSECAG00000015423	PRDM4	100	97.503	Equus_caballus
ENSTSYG00000009248	PRDM4	94	93.475	ENSEEUG00000006569	PRDM4	99	93.209	Erinaceus_europaeus
ENSTSYG00000009248	PRDM4	99	60.510	ENSELUG00000015265	prdm4	93	62.727	Esox_lucius
ENSTSYG00000009248	PRDM4	100	97.753	ENSFCAG00000022478	PRDM4	100	97.753	Felis_catus
ENSTSYG00000009248	PRDM4	99	87.453	ENSFALG00000013342	PRDM4	100	87.077	Ficedula_albicollis
ENSTSYG00000009248	PRDM4	100	86.924	ENSGALG00000012619	PRDM4	100	86.426	Gallus_gallus
ENSTSYG00000009248	PRDM4	99	87.469	ENSGAGG00000002763	PRDM4	95	87.469	Gopherus_agassizii
ENSTSYG00000009248	PRDM4	99	97.500	ENSGGOG00000001244	PRDM4	99	97.500	Gorilla_gorilla
ENSTSYG00000009248	PRDM4	99	93.726	ENSHGLG00000004590	PRDM4	98	93.350	Heterocephalus_glaber_female
ENSTSYG00000009248	PRDM4	99	92.671	ENSHGLG00100007464	PRDM4	100	92.298	Heterocephalus_glaber_male
ENSTSYG00000009248	PRDM4	95	61.140	ENSIPUG00000024162	prdm4	93	61.488	Ictalurus_punctatus
ENSTSYG00000009248	PRDM4	100	96.629	ENSSTOG00000016168	PRDM4	100	96.629	Ictidomys_tridecemlineatus
ENSTSYG00000009248	PRDM4	82	93.817	ENSJJAG00000022448	-	95	93.817	Jaculus_jaculus
ENSTSYG00000009248	PRDM4	99	72.649	ENSLACG00000007452	PRDM4	99	73.391	Latimeria_chalumnae
ENSTSYG00000009248	PRDM4	78	41.953	ENSLOCG00000017092	prdm4	100	53.247	Lepisosteus_oculatus
ENSTSYG00000009248	PRDM4	98	96.827	ENSLAFG00000001483	PRDM4	100	96.827	Loxodonta_africana
ENSTSYG00000009248	PRDM4	100	97.628	ENSMFAG00000041862	PRDM4	100	97.628	Macaca_fascicularis
ENSTSYG00000009248	PRDM4	100	97.628	ENSMMUG00000015550	PRDM4	100	97.628	Macaca_mulatta
ENSTSYG00000009248	PRDM4	100	97.378	ENSMNEG00000032319	PRDM4	100	97.378	Macaca_nemestrina
ENSTSYG00000009248	PRDM4	100	97.503	ENSMLEG00000039607	PRDM4	100	97.503	Mandrillus_leucophaeus
ENSTSYG00000009248	PRDM4	99	79.653	ENSMGAG00000012815	PRDM4	100	79.500	Meleagris_gallopavo
ENSTSYG00000009248	PRDM4	100	96.754	ENSMICG00000007807	PRDM4	100	96.754	Microcebus_murinus
ENSTSYG00000009248	PRDM4	99	93.484	ENSMOCG00000000753	Prdm4	99	93.233	Microtus_ochrogaster
ENSTSYG00000009248	PRDM4	99	94.354	ENSMUSG00000035529	Prdm4	100	94.103	Mus_musculus
ENSTSYG00000009248	PRDM4	99	93.726	MGP_PahariEiJ_G0031398	Prdm4	100	93.774	Mus_pahari
ENSTSYG00000009248	PRDM4	99	95.107	MGP_SPRETEiJ_G0016505	Prdm4	100	95.172	Mus_spretus
ENSTSYG00000009248	PRDM4	99	91.397	ENSMPUG00000012238	PRDM4	99	91.397	Mustela_putorius_furo
ENSTSYG00000009248	PRDM4	99	96.992	ENSMLUG00000000767	PRDM4	99	96.992	Myotis_lucifugus
ENSTSYG00000009248	PRDM4	99	95.483	ENSNGAG00000018627	Prdm4	100	95.483	Nannospalax_galili
ENSTSYG00000009248	PRDM4	100	97.503	ENSNLEG00000006748	PRDM4	100	97.503	Nomascus_leucogenys
ENSTSYG00000009248	PRDM4	89	88.498	ENSMEUG00000004495	PRDM4	89	88.498	Notamacropus_eugenii
ENSTSYG00000009248	PRDM4	88	95.833	ENSOPRG00000010192	PRDM4	89	95.833	Ochotona_princeps
ENSTSYG00000009248	PRDM4	99	90.375	ENSODEG00000014750	PRDM4	99	90.375	Octodon_degus
ENSTSYG00000009248	PRDM4	100	90.637	ENSOANG00000005526	PRDM4	100	90.637	Ornithorhynchus_anatinus
ENSTSYG00000009248	PRDM4	93	96.853	ENSOCUG00000012859	PRDM4	96	96.853	Oryctolagus_cuniculus
ENSTSYG00000009248	PRDM4	99	98.118	ENSOGAG00000011945	PRDM4	100	98.118	Otolemur_garnettii
ENSTSYG00000009248	PRDM4	100	96.754	ENSOARG00000017955	PRDM4	100	96.754	Ovis_aries
ENSTSYG00000009248	PRDM4	100	97.628	ENSPPAG00000038438	PRDM4	100	97.628	Pan_paniscus
ENSTSYG00000009248	PRDM4	100	97.753	ENSPPRG00000004144	PRDM4	100	97.753	Panthera_pardus
ENSTSYG00000009248	PRDM4	100	97.753	ENSPTIG00000005847	PRDM4	100	97.753	Panthera_tigris_altaica
ENSTSYG00000009248	PRDM4	100	97.878	ENSPTRG00000005400	PRDM4	100	97.878	Pan_troglodytes
ENSTSYG00000009248	PRDM4	100	97.628	ENSPANG00000022084	PRDM4	100	97.628	Papio_anubis
ENSTSYG00000009248	PRDM4	99	59.691	ENSPKIG00000000875	prdm4	99	60.404	Paramormyrops_kingsleyae
ENSTSYG00000009248	PRDM4	91	82.319	ENSPSIG00000012066	PRDM4	100	82.319	Pelodiscus_sinensis
ENSTSYG00000009248	PRDM4	99	95.232	ENSPEMG00000014598	Prdm4	100	95.232	Peromyscus_maniculatus_bairdii
ENSTSYG00000009248	PRDM4	100	88.930	ENSPCIG00000009471	PRDM4	100	88.930	Phascolarctos_cinereus
ENSTSYG00000009248	PRDM4	100	97.753	ENSPPYG00000004913	PRDM4	100	97.753	Pongo_abelii
ENSTSYG00000009248	PRDM4	83	96.278	ENSPCAG00000009987	PRDM4	83	96.278	Procavia_capensis
ENSTSYG00000009248	PRDM4	100	97.004	ENSPCOG00000021060	PRDM4	100	97.004	Propithecus_coquereli
ENSTSYG00000009248	PRDM4	100	96.758	ENSPVAG00000001596	PRDM4	100	96.758	Pteropus_vampyrus
ENSTSYG00000009248	PRDM4	99	93.985	ENSRNOG00000004962	Prdm4	100	93.609	Rattus_norvegicus
ENSTSYG00000009248	PRDM4	100	97.378	ENSRBIG00000035488	PRDM4	100	97.378	Rhinopithecus_bieti
ENSTSYG00000009248	PRDM4	100	97.503	ENSRROG00000012779	PRDM4	100	97.503	Rhinopithecus_roxellana
ENSTSYG00000009248	PRDM4	100	97.753	ENSSBOG00000000403	PRDM4	100	97.753	Saimiri_boliviensis_boliviensis
ENSTSYG00000009248	PRDM4	99	63.916	ENSSFOG00015023358	prdm4	99	63.916	Scleropages_formosus
ENSTSYG00000009248	PRDM4	100	97.253	ENSSSCG00000000160	PRDM4	100	97.253	Sus_scrofa
ENSTSYG00000009248	PRDM4	99	87.594	ENSTGUG00000010962	-	99	87.218	Taeniopygia_guttata
ENSTSYG00000009248	PRDM4	73	89.590	ENSTBEG00000001732	PRDM4	84	89.590	Tupaia_belangeri
ENSTSYG00000009248	PRDM4	100	96.629	ENSTTRG00000011056	PRDM4	100	96.629	Tursiops_truncatus
ENSTSYG00000009248	PRDM4	100	97.628	ENSUAMG00000022796	PRDM4	100	97.628	Ursus_americanus
ENSTSYG00000009248	PRDM4	100	97.628	ENSUMAG00000017231	PRDM4	100	97.628	Ursus_maritimus
ENSTSYG00000009248	PRDM4	99	97.491	ENSVPAG00000002215	PRDM4	100	97.491	Vicugna_pacos
ENSTSYG00000009248	PRDM4	100	97.503	ENSVVUG00000023397	PRDM4	100	97.503	Vulpes_vulpes