EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTSYG00000009630 (Gene tree)
Gene ID
103274795
Gene Symbol
PRDM5
Alias
PFM2
Full Name
PR/SET domain 5
Gene Type
protein_coding
Species
Carlito_syrichta
Status
putative
Strand
Minus strand
Length
211823 bases
Position
chrKE949290.1:11786-223608
Accession
103274795
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTSYP00000008844zf-C2H2PF00096.265.9e-5918
ENSTSYP00000008844zf-C2H2PF00096.265.9e-5928
ENSTSYP00000008844zf-C2H2PF00096.265.9e-5938
ENSTSYP00000008844zf-C2H2PF00096.265.9e-5948
ENSTSYP00000008844zf-C2H2PF00096.265.9e-5958
ENSTSYP00000008844zf-C2H2PF00096.265.9e-5968
ENSTSYP00000008844zf-C2H2PF00096.265.9e-5978
ENSTSYP00000008844zf-C2H2PF00096.265.9e-5988
ENSTSYP00000022896zf-C2H2PF00096.263.8e-5518
ENSTSYP00000022896zf-C2H2PF00096.263.8e-5528
ENSTSYP00000022896zf-C2H2PF00096.263.8e-5538
ENSTSYP00000022896zf-C2H2PF00096.263.8e-5548
ENSTSYP00000022896zf-C2H2PF00096.263.8e-5558
ENSTSYP00000022896zf-C2H2PF00096.263.8e-5568
ENSTSYP00000022896zf-C2H2PF00096.263.8e-5578
ENSTSYP00000022896zf-C2H2PF00096.263.8e-5588
ENSTSYP00000034749zf-C2H2PF00096.266.3e-4416
ENSTSYP00000034749zf-C2H2PF00096.266.3e-4426
ENSTSYP00000034749zf-C2H2PF00096.266.3e-4436
ENSTSYP00000034749zf-C2H2PF00096.266.3e-4446
ENSTSYP00000034749zf-C2H2PF00096.266.3e-4456
ENSTSYP00000034749zf-C2H2PF00096.266.3e-4466
ENSTSYP00000008844zf-metPF12874.75.4e-2214
ENSTSYP00000008844zf-metPF12874.75.4e-2224
ENSTSYP00000008844zf-metPF12874.75.4e-2234
ENSTSYP00000008844zf-metPF12874.75.4e-2244
ENSTSYP00000034749zf-metPF12874.72.7e-2013
ENSTSYP00000034749zf-metPF12874.72.7e-2023
ENSTSYP00000034749zf-metPF12874.72.7e-2033
ENSTSYP00000022896zf-metPF12874.71.3e-1813
ENSTSYP00000022896zf-metPF12874.71.3e-1823
ENSTSYP00000022896zf-metPF12874.71.3e-1833
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTSYT00000009642PRDM5-2011728XM_008072225ENSTSYP00000008844576 (aa)-UPI000C2F3C01
ENSTSYT00000034653PRDM5-2021635-ENSTSYP00000022896545 (aa)-UPI000C2F6931
ENSTSYT00000048513PRDM5-2031506-ENSTSYP00000034749501 (aa)-UPI000C2F3F3F
Gene Model
Click here to download ENSTSYG00000009630's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000009630's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTSYG00000009630PRDM56938.956ENSTSYG00000003164ZNF1368140.845
ENSTSYG00000009630PRDM57541.569ENSTSYG00000036894ZNF8297641.569
ENSTSYG00000009630PRDM59437.600ENSTSYG00000010610PRDM147237.600
ENSTSYG00000009630PRDM57538.182ENSTSYG00000007602ZBTB165234.742
ENSTSYG00000009630PRDM58340.408ENSTSYG00000004899ZNF29338.356
ENSTSYG00000009630PRDM57441.358ENSTSYG00000003915ZNF2348142.308
ENSTSYG00000009630PRDM57140.283ENSTSYG00000003349-9540.283
ENSTSYG00000009630PRDM57537.037ENSTSYG00000008231ZNF816437.037
ENSTSYG00000009630PRDM57340.235ENSTSYG00000003925ZNF2267441.949
ENSTSYG00000009630PRDM57150.000ENSTSYG00000006246-7350.000
ENSTSYG00000009630PRDM56843.119ENSTSYG00000034121WT15741.964
ENSTSYG00000009630PRDM57339.266ENSTSYG00000027063ZNF2356642.424
ENSTSYG00000009630PRDM57939.496ENSTSYG00000003178ZNF3847243.636
ENSTSYG00000009630PRDM57441.176ENSTSYG00000029281ZNF5826241.176
ENSTSYG00000009630PRDM57441.667ENSTSYG00000027307ZNF4239741.667
ENSTSYG00000009630PRDM58747.445ENSTSYG00000008934ZNF2259239.031
ENSTSYG00000009630PRDM57430.618ENSTSYG00000034049ZNF5748330.812
ENSTSYG00000009630PRDM57137.380ENSTSYG00000032460ZNF6708039.608
ENSTSYG00000009630PRDM57740.199ENSTSYG00000032827-8639.867
ENSTSYG00000009630PRDM57138.372ENSTSYG00000025443ZNF4087138.372
ENSTSYG00000009630PRDM58233.054ENSTSYG00000007256ZNF5969138.006
ENSTSYG00000009630PRDM56543.396ENSTSYG00000010834SNAI15143.396
ENSTSYG00000009630PRDM57248.276ENSTSYG00000029077ZFP17648.276
ENSTSYG00000009630PRDM57230.519ENSTSYG00000032488ZNF6467530.323
ENSTSYG00000009630PRDM58041.304ENSTSYG00000033183PATZ15641.304
ENSTSYG00000009630PRDM56842.500ENSTSYG00000030892SNAI26643.333
ENSTSYG00000009630PRDM59043.519ENSTSYG00000029979ZNF3178743.519
ENSTSYG00000009630PRDM57241.040ENSTSYG00000033027ZNF7685550.617
ENSTSYG00000009630PRDM58135.942ENSTSYG00000034979ZNF5997139.437
ENSTSYG00000009630PRDM57139.474ENSTSYG00000004206GTF3A7839.474
ENSTSYG00000009630PRDM58636.306ENSTSYG00000000544PRDM105636.306
ENSTSYG00000009630PRDM57533.945ENSTSYG00000004319ZNF7709930.502
ENSTSYG00000009630PRDM57840.000ENSTSYG00000026526ZFP647545.455
ENSTSYG00000009630PRDM56738.983ENSTSYG00000025594SNAI37338.983
ENSTSYG00000009630PRDM57135.277ENSTSYG00000008405-7635.885
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTSYG00000009630PRDM59597.064ENSG00000138738PRDM59696.947Homo_sapiens
ENSTSYG00000009630PRDM59479.651ENSAPOG00000023220prdm59580.620Acanthochromis_polyacanthus
ENSTSYG00000009630PRDM59092.338ENSAMEG00000003050PRDM59992.534Ailuropoda_melanoleuca
ENSTSYG00000009630PRDM59478.252ENSACIG00000000406prdm59478.641Amphilophus_citrinellus
ENSTSYG00000009630PRDM59480.583ENSAOCG00000014806prdm59581.553Amphiprion_ocellaris
ENSTSYG00000009630PRDM59078.587ENSAPEG00000016846prdm59479.691Amphiprion_percula
ENSTSYG00000009630PRDM59480.194ENSATEG00000013829prdm59581.359Anabas_testudineus
ENSTSYG00000009630PRDM59584.854ENSAPLG00000013828PRDM59984.854Anas_platyrhynchos
ENSTSYG00000009630PRDM59578.716ENSACAG00000012999PRDM59578.716Anolis_carolinensis
ENSTSYG00000009630PRDM59597.710ENSANAG00000027411PRDM59495.780Aotus_nancymaae
ENSTSYG00000009630PRDM59480.777ENSACLG00000017996prdm59581.748Astatotilapia_calliptera
ENSTSYG00000009630PRDM58477.847ENSAMXG00000041864prdm59978.882Astyanax_mexicanus
ENSTSYG00000009630PRDM59594.862ENSBTAG00000012111PRDM59594.862Bos_taurus
ENSTSYG00000009630PRDM59598.092ENSCJAG00000003133PRDM59496.304Callithrix_jacchus
ENSTSYG00000009630PRDM59187.007ENSCAFG00000004179PRDM510084.667Canis_familiaris
ENSTSYG00000009630PRDM59596.330ENSCAFG00020017685PRDM59596.330Canis_lupus_dingo
ENSTSYG00000009630PRDM59494.942ENSCHIG00000018772PRDM59594.942Capra_hircus
ENSTSYG00000009630PRDM59096.875ENSCAPG00000015217PRDM59996.875Cavia_aperea
ENSTSYG00000009630PRDM59597.328ENSCPOG00000012883PRDM59997.328Cavia_porcellus
ENSTSYG00000009630PRDM59598.092ENSCCAG00000023157PRDM59495.914Cebus_capucinus
ENSTSYG00000009630PRDM59598.473ENSCATG00000042510PRDM59497.276Cercocebus_atys
ENSTSYG00000009630PRDM59597.328ENSCLAG00000005392PRDM59997.328Chinchilla_lanigera
ENSTSYG00000009630PRDM59497.276ENSCSAG00000003729PRDM59497.276Chlorocebus_sabaeus
ENSTSYG00000009630PRDM59593.182ENSCHOG00000007801PRDM58593.182Choloepus_hoffmanni
ENSTSYG00000009630PRDM59583.394ENSCPBG00000024735PRDM59583.935Chrysemys_picta_bellii
ENSTSYG00000009630PRDM59598.473ENSCANG00000036807PRDM59497.276Colobus_angolensis_palliatus
ENSTSYG00000009630PRDM59596.947ENSCGRG00001010581Prdm59197.000Cricetulus_griseus_chok1gshd
ENSTSYG00000009630PRDM59483.946ENSCGRG00000010996-9883.946Cricetulus_griseus_crigri
ENSTSYG00000009630PRDM59480.583ENSCSEG00000019979prdm59580.583Cynoglossus_semilaevis
ENSTSYG00000009630PRDM59573.810ENSCVAG00000013692prdm59574.176Cyprinodon_variegatus
ENSTSYG00000009630PRDM59577.331ENSDARG00000006288prdm59577.331Danio_rerio
ENSTSYG00000009630PRDM59095.969ENSDNOG00000002009PRDM59995.969Dasypus_novemcinctus
ENSTSYG00000009630PRDM59596.947ENSDORG00000007739Prdm59296.947Dipodomys_ordii
ENSTSYG00000009630PRDM59485.827ENSETEG00000020268PRDM59085.827Echinops_telfairi
ENSTSYG00000009630PRDM59470.233ENSEBUG00000004301prdm59570.233Eptatretus_burgeri
ENSTSYG00000009630PRDM59598.473ENSEASG00005018365PRDM59596.304Equus_asinus_asinus
ENSTSYG00000009630PRDM59595.517ENSECAG00000011516PRDM58595.517Equus_caballus
ENSTSYG00000009630PRDM59581.985ENSECAG00000024747-9281.985Equus_caballus
ENSTSYG00000009630PRDM59586.239ENSEEUG00000010306PRDM59586.239Erinaceus_europaeus
ENSTSYG00000009630PRDM59576.562ENSELUG00000005894prdm59473.461Esox_lucius
ENSTSYG00000009630PRDM59596.330ENSFCAG00000025656PRDM59596.330Felis_catus
ENSTSYG00000009630PRDM59379.310ENSFALG00000008381PRDM59079.310Ficedula_albicollis
ENSTSYG00000009630PRDM59597.710ENSFDAG00000021361PRDM59495.136Fukomys_damarensis
ENSTSYG00000009630PRDM59480.583ENSFHEG00000013040prdm59580.971Fundulus_heteroclitus
ENSTSYG00000009630PRDM57994.118ENSGMOG00000012038prdm58894.118Gadus_morhua
ENSTSYG00000009630PRDM59585.036ENSGALG00000011963PRDM59585.036Gallus_gallus
ENSTSYG00000009630PRDM59578.278ENSGAFG00000019233prdm59480.574Gambusia_affinis
ENSTSYG00000009630PRDM59582.688ENSGAGG00000020362PRDM59382.688Gopherus_agassizii
ENSTSYG00000009630PRDM59598.473ENSGGOG00000013562PRDM59497.082Gorilla_gorilla
ENSTSYG00000009630PRDM59480.000ENSHBUG00000023375prdm59581.165Haplochromis_burtoni
ENSTSYG00000009630PRDM59096.970ENSHGLG00000003010PRDM59494.667Heterocephalus_glaber_female
ENSTSYG00000009630PRDM59597.328ENSHGLG00100003696PRDM59495.136Heterocephalus_glaber_male
ENSTSYG00000009630PRDM59578.245ENSHCOG00000012131prdm59578.976Hippocampus_comes
ENSTSYG00000009630PRDM59480.583ENSIPUG00000001248prdm59580.777Ictalurus_punctatus
ENSTSYG00000009630PRDM59594.275ENSSTOG00000004741PRDM59995.833Ictidomys_tridecemlineatus
ENSTSYG00000009630PRDM59596.947ENSJJAG00000011464Prdm59996.947Jaculus_jaculus
ENSTSYG00000009630PRDM59480.777ENSKMAG00000013663prdm59580.971Kryptolebias_marmoratus
ENSTSYG00000009630PRDM59577.839ENSLBEG00000022736prdm59578.205Labrus_bergylta
ENSTSYG00000009630PRDM59183.556ENSLACG00000009187PRDM59983.556Latimeria_chalumnae
ENSTSYG00000009630PRDM59580.734ENSLOCG00000009778prdm59580.734Lepisosteus_oculatus
ENSTSYG00000009630PRDM59495.720ENSLAFG00000006532PRDM59595.720Loxodonta_africana
ENSTSYG00000009630PRDM59598.473ENSMFAG00000045845PRDM59497.471Macaca_fascicularis
ENSTSYG00000009630PRDM59598.473ENSMMUG00000003249PRDM59497.276Macaca_mulatta
ENSTSYG00000009630PRDM59598.473ENSMNEG00000019018PRDM59497.471Macaca_nemestrina
ENSTSYG00000009630PRDM59597.431ENSMLEG00000023145PRDM510097.234Mandrillus_leucophaeus
ENSTSYG00000009630PRDM59577.879ENSMAMG00000013419prdm59578.793Mastacembelus_armatus
ENSTSYG00000009630PRDM59480.000ENSMZEG00005020645prdm59581.165Maylandia_zebra
ENSTSYG00000009630PRDM59584.854ENSMGAG00000010710PRDM59984.854Meleagris_gallopavo
ENSTSYG00000009630PRDM59596.947ENSMAUG00000006768Prdm59197.000Mesocricetus_auratus
ENSTSYG00000009630PRDM59597.328ENSMICG00000001459PRDM59494.553Microcebus_murinus
ENSTSYG00000009630PRDM59596.947ENSMOCG00000016267Prdm59197.000Microtus_ochrogaster
ENSTSYG00000009630PRDM59480.971ENSMMOG00000006035prdm59580.971Mola_mola
ENSTSYG00000009630PRDM59578.611ENSMODG00000018942PRDM59578.650Monodelphis_domestica
ENSTSYG00000009630PRDM59476.893ENSMALG00000013934prdm59477.326Monopterus_albus
ENSTSYG00000009630PRDM59596.947MGP_CAROLIEiJ_G0028463Prdm59891.150Mus_caroli
ENSTSYG00000009630PRDM59596.565ENSMUSG00000029913Prdm59196.565Mus_musculus
ENSTSYG00000009630PRDM59596.947MGP_PahariEiJ_G0022203Prdm59197.000Mus_pahari
ENSTSYG00000009630PRDM59596.565MGP_SPRETEiJ_G0029467Prdm59196.565Mus_spretus
ENSTSYG00000009630PRDM59595.780ENSMPUG00000017415PRDM59595.780Mustela_putorius_furo
ENSTSYG00000009630PRDM59083.588ENSMLUG00000006097PRDM59983.588Myotis_lucifugus
ENSTSYG00000009630PRDM59597.328ENSNGAG00000018317Prdm59197.500Nannospalax_galili
ENSTSYG00000009630PRDM59177.996ENSNBRG00000004976prdm59479.085Neolamprologus_brichardi
ENSTSYG00000009630PRDM59598.473ENSNLEG00000009107PRDM59496.887Nomascus_leucogenys
ENSTSYG00000009630PRDM57790.345ENSMEUG00000006576-6690.678Notamacropus_eugenii
ENSTSYG00000009630PRDM59496.958ENSOPRG00000011066-8176.299Ochotona_princeps
ENSTSYG00000009630PRDM59597.710ENSODEG00000009133PRDM59297.710Octodon_degus
ENSTSYG00000009630PRDM59578.205ENSONIG00000003111prdm59578.938Oreochromis_niloticus
ENSTSYG00000009630PRDM56888.889ENSOANG00000006197-9988.889Ornithorhynchus_anatinus
ENSTSYG00000009630PRDM59481.223ENSOANG00000015109PRDM59280.346Ornithorhynchus_anatinus
ENSTSYG00000009630PRDM59391.698ENSOCUG00000013454PRDM59991.698Oryctolagus_cuniculus
ENSTSYG00000009630PRDM59480.388ENSORLG00000016247prdm59581.553Oryzias_latipes
ENSTSYG00000009630PRDM59480.583ENSORLG00020018051prdm59580.777Oryzias_latipes_hni
ENSTSYG00000009630PRDM59480.388ENSORLG00015013760prdm59581.553Oryzias_latipes_hsok
ENSTSYG00000009630PRDM59480.814ENSOMEG00000005143prdm59581.202Oryzias_melastigma
ENSTSYG00000009630PRDM58388.050ENSOGAG00000009996PRDM59787.526Otolemur_garnettii
ENSTSYG00000009630PRDM59593.761ENSOARG00000015473PRDM510094.311Ovis_aries
ENSTSYG00000009630PRDM59597.064ENSPPAG00000043045PRDM510097.082Pan_paniscus
ENSTSYG00000009630PRDM59596.330ENSPPRG00000001020PRDM59596.330Panthera_pardus
ENSTSYG00000009630PRDM59596.147ENSPTIG00000010807PRDM59596.147Panthera_tigris_altaica
ENSTSYG00000009630PRDM59598.473ENSPTRG00000016403PRDM59497.276Pan_troglodytes
ENSTSYG00000009630PRDM59598.473ENSPANG00000023612PRDM59497.471Papio_anubis
ENSTSYG00000009630PRDM59552.030ENSPKIG00000015492prdm59353.291Paramormyrops_kingsleyae
ENSTSYG00000009630PRDM59584.124ENSPSIG00000013505PRDM59584.307Pelodiscus_sinensis
ENSTSYG00000009630PRDM59476.699ENSPMGG00000012622prdm59476.893Periophthalmus_magnuspinnatus
ENSTSYG00000009630PRDM57172.019ENSPMAG00000005248prdm510072.019Petromyzon_marinus
ENSTSYG00000009630PRDM59475.802ENSPFOG00000018630prdm59176.676Poecilia_formosa
ENSTSYG00000009630PRDM59578.832ENSPLAG00000014148prdm59579.745Poecilia_latipinna
ENSTSYG00000009630PRDM59481.165ENSPMEG00000018002prdm59582.136Poecilia_mexicana
ENSTSYG00000009630PRDM59481.165ENSPREG00000018366prdm59582.136Poecilia_reticulata
ENSTSYG00000009630PRDM59597.064ENSPPYG00000015031PRDM59497.064Pongo_abelii
ENSTSYG00000009630PRDM59588.991ENSPCAG00000011671PRDM59988.991Procavia_capensis
ENSTSYG00000009630PRDM59597.328ENSPCOG00000022828PRDM59197.328Propithecus_coquereli
ENSTSYG00000009630PRDM59586.606ENSPVAG00000012309PRDM59986.606Pteropus_vampyrus
ENSTSYG00000009630PRDM59480.777ENSPNYG00000012194prdm59581.748Pundamilia_nyererei
ENSTSYG00000009630PRDM59481.165ENSPNAG00000026181prdm59581.942Pygocentrus_nattereri
ENSTSYG00000009630PRDM59375.701ENSPNAG00000023191-9975.701Pygocentrus_nattereri
ENSTSYG00000009630PRDM59491.245ENSRNOG00000023679Prdm59491.245Rattus_norvegicus
ENSTSYG00000009630PRDM59598.473ENSRBIG00000041307PRDM59198.500Rhinopithecus_bieti
ENSTSYG00000009630PRDM59485.280ENSRROG00000035343PRDM59985.872Rhinopithecus_roxellana
ENSTSYG00000009630PRDM59598.092ENSSBOG00000022100PRDM59495.963Saimiri_boliviensis_boliviensis
ENSTSYG00000009630PRDM59079.508ENSSHAG00000003250PRDM510079.713Sarcophilus_harrisii
ENSTSYG00000009630PRDM59573.443ENSSFOG00015020478prdm59574.340Scleropages_formosus
ENSTSYG00000009630PRDM59481.165ENSSMAG00000018844prdm59581.165Scophthalmus_maximus
ENSTSYG00000009630PRDM59480.583ENSSDUG00000020397prdm59581.748Seriola_dumerili
ENSTSYG00000009630PRDM59480.583ENSSLDG00000013353prdm59581.748Seriola_lalandi_dorsalis
ENSTSYG00000009630PRDM59596.825ENSSARG00000014129-8096.825Sorex_araneus
ENSTSYG00000009630PRDM59590.076ENSSPUG00000009941PRDM59190.076Sphenodon_punctatus
ENSTSYG00000009630PRDM59578.205ENSSPAG00000013866prdm59579.121Stegastes_partitus
ENSTSYG00000009630PRDM59595.963ENSSSCG00000009101PRDM59596.109Sus_scrofa
ENSTSYG00000009630PRDM59584.220ENSTGUG00000001920PRDM59984.220Taeniopygia_guttata
ENSTSYG00000009630PRDM59480.388ENSTRUG00000013850prdm59580.388Takifugu_rubripes
ENSTSYG00000009630PRDM59463.178ENSTNIG00000005901prdm59563.415Tetraodon_nigroviridis
ENSTSYG00000009630PRDM59096.970ENSTBEG00000015386PRDM58596.970Tupaia_belangeri
ENSTSYG00000009630PRDM59595.046ENSTTRG00000010996PRDM59595.046Tursiops_truncatus
ENSTSYG00000009630PRDM59596.154ENSUAMG00000009994PRDM58495.354Ursus_americanus
ENSTSYG00000009630PRDM59598.473ENSUMAG00000003733PRDM59798.500Ursus_maritimus
ENSTSYG00000009630PRDM59589.908ENSVPAG00000007435PRDM59889.908Vicugna_pacos
ENSTSYG00000009630PRDM59396.435ENSVVUG00000013192PRDM59996.435Vulpes_vulpes
ENSTSYG00000009630PRDM59578.205ENSXETG00000002101prdm59578.205Xenopus_tropicalis
ENSTSYG00000009630PRDM59481.165ENSXCOG00000008567prdm59581.942Xiphophorus_couchianus
ENSTSYG00000009630PRDM59481.165ENSXMAG00000013825prdm59581.942Xiphophorus_maculatus

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