EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000009904 (Gene tree)
Gene ID: 103261325
Gene Symbol: VARS2
Alias: -
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Plus strand
Length: 12121 bases
Position: chrKE939721.1:209618-221738
Accession: 103261325
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000015543	tRNA-synt_1g	PF09334.11	2.1e-14	1	1
ENSTSYP00000009088	tRNA-synt_1g	PF09334.11	2.3e-14	1	1
ENSTSYP00000015543	Anticodon_1	PF08264.13	7.4e-33	1	1
ENSTSYP00000009088	Anticodon_1	PF08264.13	7.6e-33	1	1
ENSTSYP00000015543	tRNA-synt_1	PF00133.22	6.5e-181	1	1
ENSTSYP00000009088	tRNA-synt_1	PF00133.22	6.9e-181	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000009910	VARS2-202	3252	-	ENSTSYP00000009088	1083 (aa)	-	UPI000C2F5BDB
ENSTSYT00000028933	VARS2-201	3622	XM_008058962	ENSTSYP00000015543	1064 (aa)	XP_008057153	A0A1U7TL71

Gene Model

Click here to download ENSTSYG00000009904's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000009904's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000009904	VARS2	91	51.308	ENSTSYG00000001567	VARS	82	49.856

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000009904	VARS2	93	52.055	ENSAPOG00000007396	vars2	99	50.880	Acanthochromis_polyacanthus
ENSTSYG00000009904	VARS2	99	86.415	ENSAMEG00000012997	VARS2	99	84.940	Ailuropoda_melanoleuca
ENSTSYG00000009904	VARS2	98	51.364	ENSACIG00000004344	vars2	98	51.364	Amphilophus_citrinellus
ENSTSYG00000009904	VARS2	93	52.250	ENSAOCG00000000476	vars2	99	50.835	Amphiprion_ocellaris
ENSTSYG00000009904	VARS2	93	52.153	ENSAPEG00000008646	vars2	97	50.742	Amphiprion_percula
ENSTSYG00000009904	VARS2	92	53.393	ENSATEG00000012291	vars2	96	52.459	Anabas_testudineus
ENSTSYG00000009904	VARS2	97	57.915	ENSACAG00000022093	VARS2	97	57.915	Anolis_carolinensis
ENSTSYG00000009904	VARS2	100	89.098	ENSANAG00000038018	VARS2	100	89.098	Aotus_nancymaae
ENSTSYG00000009904	VARS2	99	51.344	ENSACLG00000018673	vars2	98	51.344	Astatotilapia_calliptera
ENSTSYG00000009904	VARS2	96	52.765	ENSAMXG00000017773	vars2	95	55.030	Astyanax_mexicanus
ENSTSYG00000009904	VARS2	99	87.583	ENSBTAG00000010698	VARS2	99	87.370	Bos_taurus
ENSTSYG00000009904	VARS2	100	88.816	ENSCJAG00000019826	VARS2	100	88.816	Callithrix_jacchus
ENSTSYG00000009904	VARS2	99	85.066	ENSCAFG00000000454	VARS2	99	85.066	Canis_familiaris
ENSTSYG00000009904	VARS2	87	85.421	ENSCAFG00020019387	VARS2	95	85.468	Canis_lupus_dingo
ENSTSYG00000009904	VARS2	99	87.666	ENSCHIG00000007847	VARS2	99	87.453	Capra_hircus
ENSTSYG00000009904	VARS2	88	83.691	ENSCAPG00000017770	VARS2	99	83.691	Cavia_aperea
ENSTSYG00000009904	VARS2	99	83.349	ENSCPOG00000021834	VARS2	99	83.349	Cavia_porcellus
ENSTSYG00000009904	VARS2	100	89.192	ENSCCAG00000037907	VARS2	100	89.192	Cebus_capucinus
ENSTSYG00000009904	VARS2	100	89.944	ENSCATG00000032554	VARS2	100	89.944	Cercocebus_atys
ENSTSYG00000009904	VARS2	99	83.035	ENSCLAG00000002889	VARS2	99	83.035	Chinchilla_lanigera
ENSTSYG00000009904	VARS2	100	89.944	ENSCSAG00000008327	VARS2	100	89.944	Chlorocebus_sabaeus
ENSTSYG00000009904	VARS2	91	62.051	ENSCPBG00000021502	VARS2	96	62.474	Chrysemys_picta_bellii
ENSTSYG00000009904	VARS2	100	89.568	ENSCANG00000014991	VARS2	99	89.568	Colobus_angolensis_palliatus
ENSTSYG00000009904	VARS2	98	82.871	ENSCGRG00001021535	Vars2	99	82.703	Cricetulus_griseus_chok1gshd
ENSTSYG00000009904	VARS2	98	82.871	ENSCGRG00000014112	Vars2	99	82.703	Cricetulus_griseus_crigri
ENSTSYG00000009904	VARS2	87	54.545	ENSCSEG00000015432	vars2	95	54.545	Cynoglossus_semilaevis
ENSTSYG00000009904	VARS2	63	53.903	ENSCVAG00000017765	vars2	94	53.903	Cyprinodon_variegatus
ENSTSYG00000009904	VARS2	96	52.687	ENSDARG00000056717	vars2	96	52.687	Danio_rerio
ENSTSYG00000009904	VARS2	78	86.499	ENSDORG00000008516	Vars2	93	86.499	Dipodomys_ordii
ENSTSYG00000009904	VARS2	99	74.906	ENSETEG00000014844	VARS2	99	74.906	Echinops_telfairi
ENSTSYG00000009904	VARS2	99	88.230	ENSEASG00005019997	VARS2	99	86.949	Equus_asinus_asinus
ENSTSYG00000009904	VARS2	99	89.548	ENSECAG00000018202	VARS2	100	89.548	Equus_caballus
ENSTSYG00000009904	VARS2	63	83.495	ENSEEUG00000012591	-	64	83.495	Erinaceus_europaeus
ENSTSYG00000009904	VARS2	93	52.229	ENSELUG00000017824	vars2	96	51.740	Esox_lucius
ENSTSYG00000009904	VARS2	99	86.578	ENSFCAG00000010531	VARS2	99	86.578	Felis_catus
ENSTSYG00000009904	VARS2	99	84.811	ENSFDAG00000017216	VARS2	99	84.811	Fukomys_damarensis
ENSTSYG00000009904	VARS2	84	53.013	ENSFHEG00000013932	vars2	91	51.884	Fundulus_heteroclitus
ENSTSYG00000009904	VARS2	88	55.439	ENSGMOG00000018960	vars2	99	55.439	Gadus_morhua
ENSTSYG00000009904	VARS2	89	48.123	ENSGAFG00000004737	vars2	92	48.123	Gambusia_affinis
ENSTSYG00000009904	VARS2	92	54.260	ENSGACG00000001464	vars2	99	54.260	Gasterosteus_aculeatus
ENSTSYG00000009904	VARS2	91	61.678	ENSGAGG00000011652	VARS2	99	61.678	Gopherus_agassizii
ENSTSYG00000009904	VARS2	100	88.910	ENSGGOG00000014587	VARS2	100	88.910	Gorilla_gorilla
ENSTSYG00000009904	VARS2	99	49.443	ENSHBUG00000002448	vars2	99	49.443	Haplochromis_burtoni
ENSTSYG00000009904	VARS2	99	82.752	ENSHGLG00000012886	VARS2	98	82.096	Heterocephalus_glaber_female
ENSTSYG00000009904	VARS2	99	82.658	ENSHGLG00100016535	VARS2	99	82.658	Heterocephalus_glaber_male
ENSTSYG00000009904	VARS2	69	49.733	ENSHCOG00000017907	vars2	94	52.113	Hippocampus_comes
ENSTSYG00000009904	VARS2	91	54.582	ENSIPUG00000015573	Vars2	98	52.642	Ictalurus_punctatus
ENSTSYG00000009904	VARS2	100	88.252	ENSSTOG00000009924	VARS2	100	88.252	Ictidomys_tridecemlineatus
ENSTSYG00000009904	VARS2	99	83.145	ENSJJAG00000011144	Vars2	100	83.145	Jaculus_jaculus
ENSTSYG00000009904	VARS2	93	51.456	ENSKMAG00000001393	vars2	99	50.138	Kryptolebias_marmoratus
ENSTSYG00000009904	VARS2	94	51.981	ENSLBEG00000011949	vars2	96	51.570	Labrus_bergylta
ENSTSYG00000009904	VARS2	52	63.423	ENSLBEG00000005480	-	82	62.950	Labrus_bergylta
ENSTSYG00000009904	VARS2	95	52.372	ENSLACG00000001576	-	99	52.621	Latimeria_chalumnae
ENSTSYG00000009904	VARS2	99	86.174	ENSLAFG00000015183	VARS2	99	86.174	Loxodonta_africana
ENSTSYG00000009904	VARS2	100	89.474	ENSMFAG00000042367	VARS2	100	89.474	Macaca_fascicularis
ENSTSYG00000009904	VARS2	100	89.568	ENSMMUG00000018609	VARS2	100	89.568	Macaca_mulatta
ENSTSYG00000009904	VARS2	100	89.756	ENSMNEG00000043163	VARS2	100	89.756	Macaca_nemestrina
ENSTSYG00000009904	VARS2	100	90.038	ENSMLEG00000041728	VARS2	100	88.757	Mandrillus_leucophaeus
ENSTSYG00000009904	VARS2	96	51.196	ENSMAMG00000020339	vars2	96	50.938	Mastacembelus_armatus
ENSTSYG00000009904	VARS2	99	51.251	ENSMZEG00005017669	vars2	98	51.251	Maylandia_zebra
ENSTSYG00000009904	VARS2	99	83.569	ENSMAUG00000018946	Vars2	99	83.569	Mesocricetus_auratus
ENSTSYG00000009904	VARS2	84	90.135	ENSMICG00000005365	VARS2	100	90.135	Microcebus_murinus
ENSTSYG00000009904	VARS2	93	86.182	ENSMOCG00000014607	Vars2	99	86.182	Microtus_ochrogaster
ENSTSYG00000009904	VARS2	91	52.632	ENSMMOG00000012122	vars2	96	51.594	Mola_mola
ENSTSYG00000009904	VARS2	99	75.589	ENSMODG00000015848	VARS2	99	75.589	Monodelphis_domestica
ENSTSYG00000009904	VARS2	93	52.695	ENSMALG00000009217	vars2	98	52.695	Monopterus_albus
ENSTSYG00000009904	VARS2	99	83.475	MGP_CAROLIEiJ_G0021529	Vars2	99	83.475	Mus_caroli
ENSTSYG00000009904	VARS2	99	83.664	ENSMUSG00000038838	Vars2	99	83.664	Mus_musculus
ENSTSYG00000009904	VARS2	99	84.230	MGP_PahariEiJ_G0020523	Vars2	99	84.230	Mus_pahari
ENSTSYG00000009904	VARS2	99	83.758	MGP_SPRETEiJ_G0022436	Vars2	99	83.758	Mus_spretus
ENSTSYG00000009904	VARS2	99	86.226	ENSMPUG00000011643	VARS2	99	86.226	Mustela_putorius_furo
ENSTSYG00000009904	VARS2	99	83.769	ENSMLUG00000002356	VARS2	98	83.134	Myotis_lucifugus
ENSTSYG00000009904	VARS2	98	77.121	ENSNGAG00000020607	Vars2	99	76.909	Nannospalax_galili
ENSTSYG00000009904	VARS2	60	50.552	ENSNBRG00000001624	vars2	57	50.829	Neolamprologus_brichardi
ENSTSYG00000009904	VARS2	100	85.942	ENSNLEG00000005625	VARS2	100	85.009	Nomascus_leucogenys
ENSTSYG00000009904	VARS2	78	74.210	ENSMEUG00000014475	VARS2	90	74.210	Notamacropus_eugenii
ENSTSYG00000009904	VARS2	90	84.071	ENSOPRG00000000682	VARS2	90	84.071	Ochotona_princeps
ENSTSYG00000009904	VARS2	99	81.569	ENSODEG00000017965	VARS2	99	81.569	Octodon_degus
ENSTSYG00000009904	VARS2	93	38.357	ENSONIG00000004734	vars2	98	38.357	Oreochromis_niloticus
ENSTSYG00000009904	VARS2	81	61.476	ENSOANG00000000398	-	99	61.476	Ornithorhynchus_anatinus
ENSTSYG00000009904	VARS2	99	80.612	ENSOCUG00000021496	VARS2	65	79.817	Oryctolagus_cuniculus
ENSTSYG00000009904	VARS2	92	53.128	ENSORLG00000010632	vars2	95	51.845	Oryzias_latipes
ENSTSYG00000009904	VARS2	92	52.871	ENSORLG00020018584	vars2	97	51.698	Oryzias_latipes_hni
ENSTSYG00000009904	VARS2	92	52.423	ENSORLG00015010408	vars2	97	50.988	Oryzias_latipes_hsok
ENSTSYG00000009904	VARS2	91	53.916	ENSOMEG00000008360	vars2	96	52.385	Oryzias_melastigma
ENSTSYG00000009904	VARS2	100	89.587	ENSOGAG00000006087	VARS2	100	88.219	Otolemur_garnettii
ENSTSYG00000009904	VARS2	99	86.540	ENSOARG00000010844	VARS2	99	86.103	Ovis_aries
ENSTSYG00000009904	VARS2	100	89.004	ENSPPAG00000041141	VARS2	100	89.004	Pan_paniscus
ENSTSYG00000009904	VARS2	99	86.484	ENSPPRG00000006751	VARS2	97	86.484	Panthera_pardus
ENSTSYG00000009904	VARS2	99	86.389	ENSPTIG00000017799	VARS2	98	87.601	Panthera_tigris_altaica
ENSTSYG00000009904	VARS2	100	89.004	ENSPTRG00000034497	VARS2	100	89.004	Pan_troglodytes
ENSTSYG00000009904	VARS2	100	89.944	ENSPANG00000018481	VARS2	100	89.944	Papio_anubis
ENSTSYG00000009904	VARS2	95	54.599	ENSPKIG00000011372	vars2	97	54.163	Paramormyrops_kingsleyae
ENSTSYG00000009904	VARS2	59	67.195	ENSPSIG00000006206	VARS2	97	64.749	Pelodiscus_sinensis
ENSTSYG00000009904	VARS2	96	52.552	ENSPMGG00000000465	vars2	98	52.552	Periophthalmus_magnuspinnatus
ENSTSYG00000009904	VARS2	99	84.042	ENSPEMG00000014691	Vars2	99	84.042	Peromyscus_maniculatus_bairdii
ENSTSYG00000009904	VARS2	99	77.599	ENSPCIG00000015040	VARS2	99	77.599	Phascolarctos_cinereus
ENSTSYG00000009904	VARS2	92	53.134	ENSPFOG00000017616	vars2	95	52.335	Poecilia_formosa
ENSTSYG00000009904	VARS2	92	52.679	ENSPLAG00000019778	vars2	96	51.891	Poecilia_latipinna
ENSTSYG00000009904	VARS2	92	52.778	ENSPMEG00000011123	vars2	95	51.988	Poecilia_mexicana
ENSTSYG00000009904	VARS2	89	48.554	ENSPREG00000014998	vars2	94	47.638	Poecilia_reticulata
ENSTSYG00000009904	VARS2	100	89.380	ENSPPYG00000016424	VARS2	100	89.380	Pongo_abelii
ENSTSYG00000009904	VARS2	84	81.977	ENSPCAG00000006946	VARS2	84	81.977	Procavia_capensis
ENSTSYG00000009904	VARS2	99	88.701	ENSPCOG00000014839	VARS2	99	87.339	Propithecus_coquereli
ENSTSYG00000009904	VARS2	100	87.124	ENSPVAG00000004197	VARS2	99	87.124	Pteropus_vampyrus
ENSTSYG00000009904	VARS2	83	60.215	ENSPNYG00000010314	vars2	98	60.215	Pundamilia_nyererei
ENSTSYG00000009904	VARS2	94	53.921	ENSPNAG00000026793	vars2	95	53.728	Pygocentrus_nattereri
ENSTSYG00000009904	VARS2	99	83.758	ENSRNOG00000000833	Vars2	99	83.758	Rattus_norvegicus
ENSTSYG00000009904	VARS2	100	89.568	ENSRBIG00000032725	VARS2	100	89.568	Rhinopithecus_bieti
ENSTSYG00000009904	VARS2	100	89.474	ENSRROG00000043847	VARS2	100	89.474	Rhinopithecus_roxellana
ENSTSYG00000009904	VARS2	100	86.648	ENSSBOG00000033240	VARS2	100	85.701	Saimiri_boliviensis_boliviensis
ENSTSYG00000009904	VARS2	99	75.898	ENSSHAG00000009307	VARS2	100	75.898	Sarcophilus_harrisii
ENSTSYG00000009904	VARS2	97	52.251	ENSSFOG00015016187	vars2	97	52.345	Scleropages_formosus
ENSTSYG00000009904	VARS2	92	54.116	ENSSMAG00000020842	vars2	98	52.701	Scophthalmus_maximus
ENSTSYG00000009904	VARS2	93	52.642	ENSSDUG00000011598	vars2	98	51.831	Seriola_dumerili
ENSTSYG00000009904	VARS2	91	53.462	ENSSLDG00000015492	vars2	96	51.810	Seriola_lalandi_dorsalis
ENSTSYG00000009904	VARS2	57	89.781	ENSSARG00000003786	-	70	89.781	Sorex_araneus
ENSTSYG00000009904	VARS2	88	59.957	ENSSPUG00000014700	VARS2	94	59.957	Sphenodon_punctatus
ENSTSYG00000009904	VARS2	93	50.697	ENSSPAG00000004654	vars2	95	49.665	Stegastes_partitus
ENSTSYG00000009904	VARS2	99	87.830	ENSSSCG00000001384	VARS2	99	87.879	Sus_scrofa
ENSTSYG00000009904	VARS2	93	53.100	ENSTRUG00000005264	vars2	95	52.637	Takifugu_rubripes
ENSTSYG00000009904	VARS2	95	52.330	ENSTNIG00000005916	vars2	99	51.535	Tetraodon_nigroviridis
ENSTSYG00000009904	VARS2	52	92.537	ENSTBEG00000007976	-	53	92.537	Tupaia_belangeri
ENSTSYG00000009904	VARS2	100	75.658	ENSTTRG00000012243	VARS2	100	75.658	Tursiops_truncatus
ENSTSYG00000009904	VARS2	99	85.297	ENSUAMG00000026124	VARS2	99	86.848	Ursus_americanus
ENSTSYG00000009904	VARS2	99	86.226	ENSUMAG00000019894	VARS2	99	86.226	Ursus_maritimus
ENSTSYG00000009904	VARS2	99	85.728	ENSVVUG00000010754	VARS2	95	85.593	Vulpes_vulpes
ENSTSYG00000009904	VARS2	89	55.348	ENSXETG00000003036	vars2	99	55.348	Xenopus_tropicalis
ENSTSYG00000009904	VARS2	89	54.054	ENSXCOG00000003455	vars2	95	52.663	Xiphophorus_couchianus
ENSTSYG00000009904	VARS2	92	52.079	ENSXMAG00000013523	vars2	97	50.951	Xiphophorus_maculatus