EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000009954 (Gene tree)
Gene ID: 103277407
Gene Symbol: SMARCA5
Alias: ISWI|hISWI|hSNF2H
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Plus strand
Length: 55060 bases
Position: chrKE951367.1:33701-88760
Accession: 103277407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000028683	ResIII	PF04851.15	6.9e-11	1	1
ENSTSYP00000009189	ResIII	PF04851.15	7e-11	1	1
ENSTSYP00000016941	ResIII	PF04851.15	7.8e-11	1	1
ENSTSYP00000023229	ResIII	PF04851.15	7.9e-11	1	1
ENSTSYP00000009189	DEAD	PF00270.29	4e-06	1	1
ENSTSYP00000028683	DEAD	PF00270.29	4.6e-06	1	1
ENSTSYP00000016941	DEAD	PF00270.29	4.6e-06	1	1
ENSTSYP00000023229	DEAD	PF00270.29	4.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000041783	SMARCA5-203	3159	-	ENSTSYP00000023229	1052 (aa)	-	UPI000C2F75EE
ENSTSYT00000031952	SMARCA5-201	3141	-	ENSTSYP00000028683	1046 (aa)	-	UPI000C2F7E29
ENSTSYT00000010018	SMARCA5-204	2985	-	ENSTSYP00000009189	994 (aa)	-	UPI000C2F4041
ENSTSYT00000027627	SMARCA5-202	3141	XM_008074783	ENSTSYP00000016941	1046 (aa)	-	UPI000C2F5E7E
ENSTSYT00000031400	SMARCA5-205	1062	-	ENSTSYP00000028668	353 (aa)	-	UPI000C2F4E62

Gene Model

Click here to download ENSTSYG00000009954's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000009954's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000009954	SMARCA5	50	46.400	ENSTSYG00000005811	-	74	46.614
ENSTSYG00000009954	SMARCA5	98	85.729	ENSTSYG00000004240	SMARCA1	94	86.758
ENSTSYG00000009954	SMARCA5	56	42.403	ENSTSYG00000003005	CHD1L	83	44.099

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000009954	SMARCA5	99	99.597	ENSG00000153147	SMARCA5	97	97.363	Homo_sapiens
ENSTSYG00000009954	SMARCA5	99	99.799	ENSAMEG00000009585	SMARCA5	99	95.985	Ailuropoda_melanoleuca
ENSTSYG00000009954	SMARCA5	97	96.817	ENSAPLG00000009206	SMARCA5	100	96.817	Anas_platyrhynchos
ENSTSYG00000009954	SMARCA5	99	96.781	ENSACAG00000003038	SMARCA5	97	96.300	Anolis_carolinensis
ENSTSYG00000009954	SMARCA5	99	99.496	ENSANAG00000019345	SMARCA5	99	99.496	Aotus_nancymaae
ENSTSYG00000009954	SMARCA5	99	99.698	ENSBTAG00000003399	SMARCA5	97	97.458	Bos_taurus
ENSTSYG00000009954	SMARCA5	99	99.597	ENSCJAG00000002735	SMARCA5	97	97.458	Callithrix_jacchus
ENSTSYG00000009954	SMARCA5	99	99.799	ENSCAFG00000007525	SMARCA5	97	97.654	Canis_familiaris
ENSTSYG00000009954	SMARCA5	98	99.692	ENSCAFG00020025641	SMARCA5	99	95.530	Canis_lupus_dingo
ENSTSYG00000009954	SMARCA5	99	98.063	ENSCHIG00000016375	-	97	96.822	Capra_hircus
ENSTSYG00000009954	SMARCA5	99	99.698	ENSCHIG00000013730	-	99	95.889	Capra_hircus
ENSTSYG00000009954	SMARCA5	97	99.070	ENSCAPG00000013747	SMARCA5	95	99.070	Cavia_aperea
ENSTSYG00000009954	SMARCA5	99	99.295	ENSCPOG00000002259	SMARCA5	99	95.502	Cavia_porcellus
ENSTSYG00000009954	SMARCA5	99	99.597	ENSCCAG00000027215	SMARCA5	99	99.597	Cebus_capucinus
ENSTSYG00000009954	SMARCA5	99	99.597	ENSCATG00000044917	SMARCA5	97	97.363	Cercocebus_atys
ENSTSYG00000009954	SMARCA5	99	99.295	ENSCLAG00000006153	SMARCA5	100	99.295	Chinchilla_lanigera
ENSTSYG00000009954	SMARCA5	97	99.690	ENSCSAG00000003448	SMARCA5	100	99.690	Chlorocebus_sabaeus
ENSTSYG00000009954	SMARCA5	91	98.405	ENSCHOG00000011724	SMARCA5	87	98.405	Choloepus_hoffmanni
ENSTSYG00000009954	SMARCA5	99	98.189	ENSCPBG00000027535	SMARCA5	99	95.275	Chrysemys_picta_bellii
ENSTSYG00000009954	SMARCA5	99	99.597	ENSCANG00000041629	SMARCA5	99	95.698	Colobus_angolensis_palliatus
ENSTSYG00000009954	SMARCA5	99	99.496	ENSCGRG00001012719	Smarca5	94	99.496	Cricetulus_griseus_chok1gshd
ENSTSYG00000009954	SMARCA5	99	99.496	ENSCGRG00000001417	Smarca5	99	99.496	Cricetulus_griseus_crigri
ENSTSYG00000009954	SMARCA5	99	96.677	ENSDNOG00000009158	SMARCA5	99	92.925	Dasypus_novemcinctus
ENSTSYG00000009954	SMARCA5	95	90.823	ENSDORG00000003466	Smarca5	97	90.823	Dipodomys_ordii
ENSTSYG00000009954	SMARCA5	97	85.847	ENSEBUG00000014773	SMARCA5	96	85.847	Eptatretus_burgeri
ENSTSYG00000009954	SMARCA5	99	99.799	ENSEASG00005001866	SMARCA5	98	99.758	Equus_asinus_asinus
ENSTSYG00000009954	SMARCA5	99	99.799	ENSECAG00000002676	SMARCA5	99	95.985	Equus_caballus
ENSTSYG00000009954	SMARCA5	99	95.065	ENSEEUG00000013176	SMARCA5	100	95.065	Erinaceus_europaeus
ENSTSYG00000009954	SMARCA5	97	89.381	ENSELUG00000014653	SMARCA5	99	89.381	Esox_lucius
ENSTSYG00000009954	SMARCA5	99	99.799	ENSFCAG00000004544	SMARCA5	99	95.985	Felis_catus
ENSTSYG00000009954	SMARCA5	97	97.423	ENSFALG00000004987	SMARCA5	100	97.423	Ficedula_albicollis
ENSTSYG00000009954	SMARCA5	100	99.396	ENSFDAG00000021016	SMARCA5	100	99.496	Fukomys_damarensis
ENSTSYG00000009954	SMARCA5	98	89.458	ENSGMOG00000007519	SMARCA5	98	86.640	Gadus_morhua
ENSTSYG00000009954	SMARCA5	99	97.787	ENSGALG00000009913	SMARCA5	98	95.788	Gallus_gallus
ENSTSYG00000009954	SMARCA5	98	90.583	ENSGACG00000017238	SMARCA5	98	87.968	Gasterosteus_aculeatus
ENSTSYG00000009954	SMARCA5	99	98.290	ENSGAGG00000019882	SMARCA5	100	95.110	Gopherus_agassizii
ENSTSYG00000009954	SMARCA5	100	99.598	ENSGGOG00000012595	SMARCA5	100	99.598	Gorilla_gorilla
ENSTSYG00000009954	SMARCA5	99	89.728	ENSHGLG00000000317	-	99	87.162	Heterocephalus_glaber_female
ENSTSYG00000009954	SMARCA5	99	99.396	ENSHGLG00000000816	-	99	95.694	Heterocephalus_glaber_female
ENSTSYG00000009954	SMARCA5	100	99.296	ENSHGLG00100018421	-	100	99.396	Heterocephalus_glaber_male
ENSTSYG00000009954	SMARCA5	99	99.496	ENSSTOG00000010683	SMARCA5	96	98.510	Ictidomys_tridecemlineatus
ENSTSYG00000009954	SMARCA5	99	99.194	ENSJJAG00000014965	Smarca5	96	98.213	Jaculus_jaculus
ENSTSYG00000009954	SMARCA5	99	95.560	ENSLACG00000007091	SMARCA5	98	95.005	Latimeria_chalumnae
ENSTSYG00000009954	SMARCA5	99	92.487	ENSLOCG00000008966	SMARCA5	99	90.730	Lepisosteus_oculatus
ENSTSYG00000009954	SMARCA5	99	99.799	ENSLAFG00000007795	SMARCA5	96	98.710	Loxodonta_africana
ENSTSYG00000009954	SMARCA5	99	99.597	ENSMFAG00000043649	SMARCA5	97	97.363	Macaca_fascicularis
ENSTSYG00000009954	SMARCA5	99	99.597	ENSMMUG00000000829	SMARCA5	97	99.578	Macaca_mulatta
ENSTSYG00000009954	SMARCA5	99	99.597	ENSMNEG00000031916	SMARCA5	97	97.363	Macaca_nemestrina
ENSTSYG00000009954	SMARCA5	99	99.597	ENSMLEG00000042393	SMARCA5	97	97.363	Mandrillus_leucophaeus
ENSTSYG00000009954	SMARCA5	99	97.787	ENSMGAG00000003517	SMARCA5	99	97.787	Meleagris_gallopavo
ENSTSYG00000009954	SMARCA5	99	99.496	ENSMAUG00000015902	Smarca5	98	99.496	Mesocricetus_auratus
ENSTSYG00000009954	SMARCA5	99	99.799	ENSMICG00000003971	SMARCA5	100	98.200	Microcebus_murinus
ENSTSYG00000009954	SMARCA5	99	99.094	ENSMOCG00000016986	-	99	95.311	Microtus_ochrogaster
ENSTSYG00000009954	SMARCA5	99	99.193	ENSMODG00000000391	SMARCA5	96	98.119	Monodelphis_domestica
ENSTSYG00000009954	SMARCA5	99	99.194	ENSMUSG00000031715	Smarca5	96	98.213	Mus_musculus
ENSTSYG00000009954	SMARCA5	99	99.396	MGP_PahariEiJ_G0022862	Smarca5	96	98.411	Mus_pahari
ENSTSYG00000009954	SMARCA5	99	99.698	ENSMLUG00000000468	SMARCA5	99	95.889	Myotis_lucifugus
ENSTSYG00000009954	SMARCA5	99	99.396	ENSNGAG00000000441	Smarca5	97	97.559	Nannospalax_galili
ENSTSYG00000009954	SMARCA5	99	99.597	ENSNLEG00000005383	SMARCA5	97	97.363	Nomascus_leucogenys
ENSTSYG00000009954	SMARCA5	97	91.322	ENSMEUG00000001267	SMARCA5	100	91.322	Notamacropus_eugenii
ENSTSYG00000009954	SMARCA5	90	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSTSYG00000009954	SMARCA5	97	99.071	ENSOANG00000013921	SMARCA5	100	99.071	Ornithorhynchus_anatinus
ENSTSYG00000009954	SMARCA5	97	99.690	ENSOCUG00000013042	SMARCA5	100	99.690	Oryctolagus_cuniculus
ENSTSYG00000009954	SMARCA5	99	99.799	ENSOGAG00000009702	SMARCA5	99	95.710	Otolemur_garnettii
ENSTSYG00000009954	SMARCA5	99	99.496	ENSOARG00000010589	SMARCA5	94	99.496	Ovis_aries
ENSTSYG00000009954	SMARCA5	100	99.497	ENSPPAG00000028523	SMARCA5	100	99.497	Pan_paniscus
ENSTSYG00000009954	SMARCA5	99	93.857	ENSPPRG00000004925	SMARCA5	99	91.205	Panthera_pardus
ENSTSYG00000009954	SMARCA5	99	99.799	ENSPTIG00000020959	SMARCA5	97	98.808	Panthera_tigris_altaica
ENSTSYG00000009954	SMARCA5	100	99.598	ENSPTRG00000016472	SMARCA5	100	99.598	Pan_troglodytes
ENSTSYG00000009954	SMARCA5	99	99.597	ENSPANG00000001175	SMARCA5	97	97.363	Papio_anubis
ENSTSYG00000009954	SMARCA5	98	91.207	ENSPKIG00000015885	SMARCA5	100	91.443	Paramormyrops_kingsleyae
ENSTSYG00000009954	SMARCA5	98	90.779	ENSPKIG00000015699	SMARCA5	98	89.716	Paramormyrops_kingsleyae
ENSTSYG00000009954	SMARCA5	99	96.177	ENSPSIG00000004177	SMARCA5	100	95.988	Pelodiscus_sinensis
ENSTSYG00000009954	SMARCA5	97	90.123	ENSPMGG00000012316	SMARCA5	100	90.123	Periophthalmus_magnuspinnatus
ENSTSYG00000009954	SMARCA5	99	99.496	ENSPEMG00000008060	Smarca5	98	99.496	Peromyscus_maniculatus_bairdii
ENSTSYG00000009954	SMARCA5	99	70.582	ENSPMAG00000006011	SMARCA5	83	84.031	Petromyzon_marinus
ENSTSYG00000009954	SMARCA5	64	86.739	ENSPMAG00000008026	SMARCA5	99	86.739	Petromyzon_marinus
ENSTSYG00000009954	SMARCA5	99	99.193	ENSPCIG00000003926	SMARCA5	98	96.595	Phascolarctos_cinereus
ENSTSYG00000009954	SMARCA5	99	99.597	ENSPPYG00000015091	SMARCA5	97	97.458	Pongo_abelii
ENSTSYG00000009954	SMARCA5	84	95.833	ENSPCAG00000014230	SMARCA5	83	95.833	Procavia_capensis
ENSTSYG00000009954	SMARCA5	99	96.878	ENSPCOG00000026744	SMARCA5	99	96.375	Propithecus_coquereli
ENSTSYG00000009954	SMARCA5	99	99.698	ENSPVAG00000006482	SMARCA5	99	95.981	Pteropus_vampyrus
ENSTSYG00000009954	SMARCA5	99	89.940	ENSPNAG00000027824	SMARCA5	97	90.353	Pygocentrus_nattereri
ENSTSYG00000009954	SMARCA5	99	99.295	ENSRNOG00000018149	Smarca5	99	99.295	Rattus_norvegicus
ENSTSYG00000009954	SMARCA5	99	99.597	ENSRBIG00000044644	SMARCA5	97	97.556	Rhinopithecus_bieti
ENSTSYG00000009954	SMARCA5	99	99.597	ENSRROG00000029591	SMARCA5	99	99.597	Rhinopithecus_roxellana
ENSTSYG00000009954	SMARCA5	99	99.597	ENSSBOG00000036257	SMARCA5	97	97.556	Saimiri_boliviensis_boliviensis
ENSTSYG00000009954	SMARCA5	99	99.193	ENSSHAG00000008464	SMARCA5	100	98.993	Sarcophilus_harrisii
ENSTSYG00000009954	SMARCA5	99	90.241	ENSSFOG00015013252	SMARCA5	99	88.639	Scleropages_formosus
ENSTSYG00000009954	SMARCA5	99	96.667	ENSSPUG00000007604	SMARCA5	99	96.667	Sphenodon_punctatus
ENSTSYG00000009954	SMARCA5	99	99.799	ENSSSCG00000009047	SMARCA5	96	98.808	Sus_scrofa
ENSTSYG00000009954	SMARCA5	99	96.982	ENSTGUG00000002408	SMARCA5	99	96.982	Taeniopygia_guttata
ENSTSYG00000009954	SMARCA5	98	99.692	ENSUAMG00000023495	SMARCA5	98	95.530	Ursus_americanus
ENSTSYG00000009954	SMARCA5	99	99.799	ENSUMAG00000015324	SMARCA5	97	99.301	Ursus_maritimus
ENSTSYG00000009954	SMARCA5	99	99.496	ENSVPAG00000008982	SMARCA5	96	98.608	Vicugna_pacos
ENSTSYG00000009954	SMARCA5	99	99.799	ENSVVUG00000017473	SMARCA5	99	96.528	Vulpes_vulpes
ENSTSYG00000009954	SMARCA5	94	93.717	ENSXETG00000017566	smarca5	95	93.333	Xenopus_tropicalis