EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTSYG00000011028 (Gene tree)
Gene ID: 103257169
Gene Symbol: -
Alias: -
Full Name: matrin 3
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Plus strand
Length: 27165 bases
Position: chrKE926132.1:5816-32980
Accession: 103257169
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000034499	RRM_5	PF13893.6	5.2e-07	1	2
ENSTSYP00000034499	RRM_5	PF13893.6	5.2e-07	2	2
ENSTSYP00000020411	RRM_5	PF13893.6	6.2e-07	1	2
ENSTSYP00000020411	RRM_5	PF13893.6	6.2e-07	2	2
ENSTSYP00000010112	RRM_5	PF13893.6	1.6e-06	1	1
ENSTSYP00000017697	RRM_5	PF13893.6	1.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000011026	-	2385	XM_008054913	ENSTSYP00000010112	794 (aa)	XP_008053104	UPI000C2F6B47
ENSTSYT00000043305	-	852	-	ENSTSYP00000030039	283 (aa)	-	UPI000C2F554A
ENSTSYT00000041610	-	4164	XM_008054897	ENSTSYP00000017697	847 (aa)	XP_008053088	A0A1U7TH72
ENSTSYT00000047467	-	1632	-	ENSTSYP00000020411	543 (aa)	-	UPI000C2F75A5
ENSTSYT00000028210	-	1536	-	ENSTSYP00000034499	511 (aa)	-	UPI000C2F7CD7

Gene Model

Click here to download ENSTSYG00000011028's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000011028's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000011028	-	100	98.701	ENSG00000015479	MATR3	100	100.000	Homo_sapiens
ENSTSYG00000011028	-	99	93.304	ENSAMEG00000011347	-	100	93.304	Ailuropoda_melanoleuca
ENSTSYG00000011028	-	100	77.644	ENSAPLG00000008118	-	92	86.040	Anas_platyrhynchos
ENSTSYG00000011028	-	99	72.182	ENSACAG00000016233	-	99	71.044	Anolis_carolinensis
ENSTSYG00000011028	-	100	98.583	ENSANAG00000022951	-	100	98.583	Aotus_nancymaae
ENSTSYG00000011028	-	89	72.671	ENSANAG00000024654	-	99	72.671	Aotus_nancymaae
ENSTSYG00000011028	-	52	55.556	ENSACLG00000015903	matr3l1.1	62	57.143	Astatotilapia_calliptera
ENSTSYG00000011028	-	80	46.835	ENSAMXG00000010681	matr3l1.1	66	48.148	Astyanax_mexicanus
ENSTSYG00000011028	-	85	33.663	ENSAMXG00000010685	matr3l1.1	81	39.706	Astyanax_mexicanus
ENSTSYG00000011028	-	100	92.891	ENSBTAG00000006756	MATR3	100	92.891	Bos_taurus
ENSTSYG00000011028	-	98	97.561	ENSCJAG00000006888	-	99	98.228	Callithrix_jacchus
ENSTSYG00000011028	-	100	97.998	ENSCAFG00000001345	MATR3	100	97.998	Canis_familiaris
ENSTSYG00000011028	-	99	96.127	ENSCAFG00020010504	-	98	98.192	Canis_lupus_dingo
ENSTSYG00000011028	-	100	98.469	ENSCHIG00000025746	-	100	98.469	Capra_hircus
ENSTSYG00000011028	-	99	98.463	ENSCPOG00000014076	-	99	98.463	Cavia_porcellus
ENSTSYG00000011028	-	100	98.819	ENSCCAG00000025074	-	100	98.819	Cebus_capucinus
ENSTSYG00000011028	-	98	97.749	ENSCATG00000041304	-	98	97.632	Cercocebus_atys
ENSTSYG00000011028	-	99	98.700	ENSCLAG00000015998	-	99	98.700	Chinchilla_lanigera
ENSTSYG00000011028	-	100	98.937	ENSCSAG00000013075	-	100	98.937	Chlorocebus_sabaeus
ENSTSYG00000011028	-	100	76.451	ENSCPBG00000006303	-	77	86.040	Chrysemys_picta_bellii
ENSTSYG00000011028	-	100	97.521	ENSCANG00000028224	-	100	97.521	Colobus_angolensis_palliatus
ENSTSYG00000011028	-	100	98.347	ENSCGRG00001020227	Matr3	100	98.347	Cricetulus_griseus_chok1gshd
ENSTSYG00000011028	-	100	98.229	ENSCGRG00000011298	Matr3	100	98.229	Cricetulus_griseus_crigri
ENSTSYG00000011028	-	97	32.143	ENSCSEG00000012682	matr3l1.1	81	32.143	Cynoglossus_semilaevis
ENSTSYG00000011028	-	73	32.450	ENSCVAG00000005337	matr3l1.1	81	30.396	Cyprinodon_variegatus
ENSTSYG00000011028	-	100	92.984	ENSDNOG00000037723	-	100	92.984	Dasypus_novemcinctus
ENSTSYG00000011028	-	100	98.469	ENSEASG00005020857	-	100	98.469	Equus_asinus_asinus
ENSTSYG00000011028	-	100	98.351	ENSECAG00000012882	MATR3	100	98.351	Equus_caballus
ENSTSYG00000011028	-	76	42.718	ENSELUG00000021651	si:ch211-271b14.1	86	42.718	Esox_lucius
ENSTSYG00000011028	-	86	30.539	ENSELUG00000021848	matr3l1.1	60	51.515	Esox_lucius
ENSTSYG00000011028	-	100	98.367	ENSFCAG00000021911	-	100	98.367	Felis_catus
ENSTSYG00000011028	-	100	74.130	ENSFALG00000003071	-	77	84.831	Ficedula_albicollis
ENSTSYG00000011028	-	100	97.403	ENSFDAG00000017675	-	100	97.403	Fukomys_damarensis
ENSTSYG00000011028	-	100	77.108	ENSGALG00000002478	MATR3	92	85.613	Gallus_gallus
ENSTSYG00000011028	-	99	76.368	ENSGAGG00000011386	-	77	86.040	Gopherus_agassizii
ENSTSYG00000011028	-	100	98.819	ENSGGOG00000007308	-	100	98.819	Gorilla_gorilla
ENSTSYG00000011028	-	100	98.583	ENSHGLG00000004673	MATR3	100	98.583	Heterocephalus_glaber_female
ENSTSYG00000011028	-	98	97.012	ENSHGLG00100006442	-	100	97.642	Heterocephalus_glaber_male
ENSTSYG00000011028	-	59	37.222	ENSHCOG00000013223	matr3l1.1	80	30.269	Hippocampus_comes
ENSTSYG00000011028	-	100	98.587	ENSSTOG00000014746	-	100	98.587	Ictidomys_tridecemlineatus
ENSTSYG00000011028	-	100	97.639	ENSJJAG00000021710	-	100	97.639	Jaculus_jaculus
ENSTSYG00000011028	-	98	69.246	ENSJJAG00000011022	-	100	69.080	Jaculus_jaculus
ENSTSYG00000011028	-	64	41.772	ENSLBEG00000018267	matr3l1.1	69	43.210	Labrus_bergylta
ENSTSYG00000011028	-	99	56.541	ENSLACG00000006743	-	99	57.050	Latimeria_chalumnae
ENSTSYG00000011028	-	98	97.940	ENSMFAG00000000634	-	98	97.814	Macaca_fascicularis
ENSTSYG00000011028	-	100	98.992	ENSMMUG00000016741	MATR3	100	98.992	Macaca_mulatta
ENSTSYG00000011028	-	63	97.024	ENSMMUG00000015963	-	99	97.024	Macaca_mulatta
ENSTSYG00000011028	-	100	99.055	ENSMNEG00000042856	-	100	99.055	Macaca_nemestrina
ENSTSYG00000011028	-	100	99.055	ENSMLEG00000041178	-	100	99.055	Mandrillus_leucophaeus
ENSTSYG00000011028	-	75	48.235	ENSMAMG00000013840	matr3l1.1	75	43.119	Mastacembelus_armatus
ENSTSYG00000011028	-	100	76.999	ENSMGAG00000001331	-	92	85.470	Meleagris_gallopavo
ENSTSYG00000011028	-	100	98.111	ENSMAUG00000011647	Matr3	100	98.111	Mesocricetus_auratus
ENSTSYG00000011028	-	99	97.398	ENSMICG00000012438	-	100	97.239	Microcebus_murinus
ENSTSYG00000011028	-	100	98.111	ENSMOCG00000015711	Matr3	100	98.111	Microtus_ochrogaster
ENSTSYG00000011028	-	100	90.984	ENSMODG00000011925	-	99	89.227	Monodelphis_domestica
ENSTSYG00000011028	-	100	98.229	MGP_CAROLIEiJ_G0022108	Matr3	100	98.229	Mus_caroli
ENSTSYG00000011028	-	100	98.229	ENSMUSG00000037236	Matr3	100	98.229	Mus_musculus
ENSTSYG00000011028	-	100	98.229	MGP_PahariEiJ_G0018842	Matr3	100	98.229	Mus_pahari
ENSTSYG00000011028	-	100	97.875	MGP_SPRETEiJ_G0023020	Matr3	100	97.875	Mus_spretus
ENSTSYG00000011028	-	100	96.759	ENSMPUG00000009297	-	100	96.759	Mustela_putorius_furo
ENSTSYG00000011028	-	100	97.294	ENSMLUG00000005798	-	99	97.294	Myotis_lucifugus
ENSTSYG00000011028	-	100	98.347	ENSNGAG00000017452	Matr3	100	98.347	Nannospalax_galili
ENSTSYG00000011028	-	100	99.055	ENSNLEG00000009093	-	100	99.055	Nomascus_leucogenys
ENSTSYG00000011028	-	99	90.734	ENSOPRG00000016511	-	95	90.084	Ochotona_princeps
ENSTSYG00000011028	-	99	98.109	ENSODEG00000003015	-	99	98.109	Octodon_degus
ENSTSYG00000011028	-	100	98.701	ENSOCUG00000026311	MATR3	100	98.701	Oryctolagus_cuniculus
ENSTSYG00000011028	-	50	46.835	ENSORLG00000025674	matr3l1.1	79	33.333	Oryzias_latipes
ENSTSYG00000011028	-	72	36.923	ENSORLG00020009362	matr3l1.1	81	33.333	Oryzias_latipes_hni
ENSTSYG00000011028	-	64	46.835	ENSORLG00015018551	matr3l1.1	81	33.333	Oryzias_latipes_hsok
ENSTSYG00000011028	-	67	40.351	ENSOMEG00000022287	matr3l1.1	80	37.984	Oryzias_melastigma
ENSTSYG00000011028	-	100	99.055	ENSOGAG00000010607	-	100	99.055	Otolemur_garnettii
ENSTSYG00000011028	-	100	98.469	ENSOARG00000016931	-	99	98.469	Ovis_aries
ENSTSYG00000011028	-	98	97.561	ENSPPAG00000001418	-	98	97.450	Pan_paniscus
ENSTSYG00000011028	-	98	92.120	ENSPPAG00000026720	-	99	93.066	Pan_paniscus
ENSTSYG00000011028	-	100	98.492	ENSPPRG00000008004	-	100	98.492	Panthera_pardus
ENSTSYG00000011028	-	98	97.009	ENSPTIG00000010711	-	100	98.399	Panthera_tigris_altaica
ENSTSYG00000011028	-	98	97.561	ENSPTRG00000017294	MATR3	98	97.450	Pan_troglodytes
ENSTSYG00000011028	-	100	97.639	ENSPANG00000012018	-	100	97.639	Papio_anubis
ENSTSYG00000011028	-	98	97.749	ENSPANG00000032489	-	99	98.358	Papio_anubis
ENSTSYG00000011028	-	97	32.594	ENSPKIG00000000333	matr3l1.1	63	34.818	Paramormyrops_kingsleyae
ENSTSYG00000011028	-	99	76.889	ENSPSIG00000014598	-	77	86.467	Pelodiscus_sinensis
ENSTSYG00000011028	-	100	97.993	ENSPEMG00000020679	Matr3	100	97.993	Peromyscus_maniculatus_bairdii
ENSTSYG00000011028	-	100	93.743	ENSPPYG00000015835	-	100	93.743	Pongo_abelii
ENSTSYG00000011028	-	100	98.701	ENSPCOG00000025718	-	100	98.701	Propithecus_coquereli
ENSTSYG00000011028	-	99	93.214	ENSPVAG00000015431	-	100	93.629	Pteropus_vampyrus
ENSTSYG00000011028	-	58	45.556	ENSPNYG00000015855	-	97	38.298	Pundamilia_nyererei
ENSTSYG00000011028	-	100	97.757	ENSRNOG00000019875	Matr3	100	97.757	Rattus_norvegicus
ENSTSYG00000011028	-	98	97.936	ENSRBIG00000034713	-	98	97.814	Rhinopithecus_bieti
ENSTSYG00000011028	-	100	97.403	ENSRROG00000043949	-	100	97.403	Rhinopithecus_roxellana
ENSTSYG00000011028	-	100	96.694	ENSRROG00000039415	-	100	98.625	Rhinopithecus_roxellana
ENSTSYG00000011028	-	100	98.701	ENSSBOG00000030159	-	100	98.701	Saimiri_boliviensis_boliviensis
ENSTSYG00000011028	-	100	91.101	ENSSHAG00000010331	-	99	89.344	Sarcophilus_harrisii
ENSTSYG00000011028	-	62	55.556	ENSSDUG00000015369	matr3l1.1	59	51.471	Seriola_dumerili
ENSTSYG00000011028	-	99	75.711	ENSSPUG00000019236	-	99	74.697	Sphenodon_punctatus
ENSTSYG00000011028	-	100	98.367	ENSSSCG00000014343	-	100	98.367	Sus_scrofa
ENSTSYG00000011028	-	99	76.561	ENSTGUG00000014568	MATR3	77	85.653	Taeniopygia_guttata
ENSTSYG00000011028	-	53	37.327	ENSTRUG00000001692	-	66	36.735	Takifugu_rubripes
ENSTSYG00000011028	-	85	39.247	ENSTNIG00000003166	matr3l1.1	72	57.143	Tetraodon_nigroviridis
ENSTSYG00000011028	-	90	98.331	ENSUAMG00000000097	-	97	98.331	Ursus_americanus
ENSTSYG00000011028	-	100	97.880	ENSUMAG00000015808	-	100	97.880	Ursus_maritimus
ENSTSYG00000011028	-	100	92.547	ENSVPAG00000006337	-	100	92.547	Vicugna_pacos
ENSTSYG00000011028	-	100	98.233	ENSVVUG00000020287	-	100	98.233	Vulpes_vulpes
ENSTSYG00000011028	-	86	59.568	ENSXETG00000003838	matr3	100	52.188	Xenopus_tropicalis
ENSTSYG00000011028	-	68	34.343	ENSXMAG00000014107	-	70	57.143	Xiphophorus_maculatus