EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTSYG00000011305 (Gene tree)
Gene ID: 103267101
Gene Symbol: RTCA
Alias: -
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Minus strand
Length: 26099 bases
Position: chrKE943265.1:470898-496996
Accession: 103267101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000013813	RTC	PF01137.21	8.2e-89	1	1
ENSTSYP00000010372	RTC	PF01137.21	5e-83	1	1
ENSTSYP00000013813	RTC_insert	PF05189.13	3.1e-24	1	1
ENSTSYP00000010372	RTC_insert	PF05189.13	3.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000011305	RTCA-202	1140	-	ENSTSYP00000010372	379 (aa)	XP_021571540	UPI000B52EA0D
ENSTSYT00000047768	RTCA-201	1418	XM_008064706	ENSTSYP00000013813	366 (aa)	XP_008062897	A0A1U7UCB0

Gene Model

Click here to download ENSTSYG00000011305's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000011305's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000011305	RTCA	100	92.896	ENSG00000137996	RTCA	100	93.878	Homo_sapiens
ENSTSYG00000011305	RTCA	99	71.191	ENSAPOG00000001345	rtca	98	71.191	Acanthochromis_polyacanthus
ENSTSYG00000011305	RTCA	73	92.937	ENSAMEG00000008855	RTCA	100	92.937	Ailuropoda_melanoleuca
ENSTSYG00000011305	RTCA	99	72.099	ENSACIG00000019643	rtca	99	72.099	Amphilophus_citrinellus
ENSTSYG00000011305	RTCA	100	70.492	ENSAOCG00000014979	rtca	99	70.492	Amphiprion_ocellaris
ENSTSYG00000011305	RTCA	100	70.492	ENSAPEG00000006945	rtca	99	70.492	Amphiprion_percula
ENSTSYG00000011305	RTCA	100	70.219	ENSATEG00000006315	rtca	100	70.219	Anabas_testudineus
ENSTSYG00000011305	RTCA	96	79.379	ENSAPLG00000015430	RTCA	100	79.379	Anas_platyrhynchos
ENSTSYG00000011305	RTCA	100	92.350	ENSANAG00000025446	RTCA	100	92.350	Aotus_nancymaae
ENSTSYG00000011305	RTCA	100	70.027	ENSACLG00000020770	rtca	99	70.027	Astatotilapia_calliptera
ENSTSYG00000011305	RTCA	100	71.858	ENSAMXG00000043271	rtca	100	71.858	Astyanax_mexicanus
ENSTSYG00000011305	RTCA	100	93.989	ENSBTAG00000006321	RTCA	100	93.989	Bos_taurus
ENSTSYG00000011305	RTCA	100	92.623	ENSCJAG00000003398	RTCA	100	92.623	Callithrix_jacchus
ENSTSYG00000011305	RTCA	100	93.716	ENSCAFG00000020010	RTCA	68	93.716	Canis_familiaris
ENSTSYG00000011305	RTCA	100	93.716	ENSCAFG00020011528	RTCA	57	93.716	Canis_lupus_dingo
ENSTSYG00000011305	RTCA	100	93.716	ENSCHIG00000018937	RTCA	100	93.716	Capra_hircus
ENSTSYG00000011305	RTCA	100	92.350	ENSCCAG00000021844	RTCA	100	92.350	Cebus_capucinus
ENSTSYG00000011305	RTCA	100	91.821	ENSCATG00000019364	RTCA	100	92.557	Cercocebus_atys
ENSTSYG00000011305	RTCA	87	93.691	ENSCLAG00000006125	RTCA	100	93.691	Chinchilla_lanigera
ENSTSYG00000011305	RTCA	100	93.169	ENSCSAG00000001509	RTCA	100	93.169	Chlorocebus_sabaeus
ENSTSYG00000011305	RTCA	100	93.443	ENSCHOG00000005211	RTCA	100	93.443	Choloepus_hoffmanni
ENSTSYG00000011305	RTCA	100	82.787	ENSCPBG00000026658	RTCA	100	82.787	Chrysemys_picta_bellii
ENSTSYG00000011305	RTCA	98	55.278	ENSCING00000007875	-	98	55.278	Ciona_intestinalis
ENSTSYG00000011305	RTCA	98	54.722	ENSCSAVG00000007269	-	98	54.722	Ciona_savignyi
ENSTSYG00000011305	RTCA	100	92.896	ENSCANG00000040106	RTCA	100	92.896	Colobus_angolensis_palliatus
ENSTSYG00000011305	RTCA	73	91.078	ENSCGRG00001013163	Rtca	85	91.078	Cricetulus_griseus_chok1gshd
ENSTSYG00000011305	RTCA	98	69.722	ENSCSEG00000000530	rtca	96	69.722	Cynoglossus_semilaevis
ENSTSYG00000011305	RTCA	100	59.290	ENSCVAG00000021809	rtca	100	59.290	Cyprinodon_variegatus
ENSTSYG00000011305	RTCA	100	72.404	ENSDARG00000002215	rtca	100	72.404	Danio_rerio
ENSTSYG00000011305	RTCA	100	93.716	ENSDNOG00000000456	RTCA	100	93.716	Dasypus_novemcinctus
ENSTSYG00000011305	RTCA	100	92.896	ENSDORG00000005448	Rtca	100	92.896	Dipodomys_ordii
ENSTSYG00000011305	RTCA	99	38.950	FBgn0025630	Rtca	99	38.950	Drosophila_melanogaster
ENSTSYG00000011305	RTCA	95	55.932	ENSEBUG00000008556	rtca	97	55.932	Eptatretus_burgeri
ENSTSYG00000011305	RTCA	100	93.169	ENSEASG00005015926	RTCA	100	93.169	Equus_asinus_asinus
ENSTSYG00000011305	RTCA	100	93.169	ENSECAG00000019831	RTCA	100	93.169	Equus_caballus
ENSTSYG00000011305	RTCA	91	83.526	ENSEEUG00000001165	RTCA	100	83.526	Erinaceus_europaeus
ENSTSYG00000011305	RTCA	99	72.022	ENSELUG00000003741	rtca	99	72.022	Esox_lucius
ENSTSYG00000011305	RTCA	100	94.809	ENSFCAG00000024460	RTCA	100	94.809	Felis_catus
ENSTSYG00000011305	RTCA	93	81.176	ENSFALG00000002443	RTCA	91	81.176	Ficedula_albicollis
ENSTSYG00000011305	RTCA	98	73.204	ENSFDAG00000016084	-	100	73.204	Fukomys_damarensis
ENSTSYG00000011305	RTCA	100	94.536	ENSFDAG00000012070	-	100	94.536	Fukomys_damarensis
ENSTSYG00000011305	RTCA	72	60.687	ENSFHEG00000002868	rtca	90	70.192	Fundulus_heteroclitus
ENSTSYG00000011305	RTCA	100	69.399	ENSGMOG00000013264	rtca	100	69.399	Gadus_morhua
ENSTSYG00000011305	RTCA	100	81.694	ENSGALG00000005277	RTCA	100	81.694	Gallus_gallus
ENSTSYG00000011305	RTCA	100	71.585	ENSGAFG00000011853	rtca	99	71.585	Gambusia_affinis
ENSTSYG00000011305	RTCA	100	69.399	ENSGACG00000013497	rtca	100	69.399	Gasterosteus_aculeatus
ENSTSYG00000011305	RTCA	80	83.618	ENSGAGG00000023306	RTCA	100	83.618	Gopherus_agassizii
ENSTSYG00000011305	RTCA	100	92.896	ENSGGOG00000009546	-	100	92.896	Gorilla_gorilla
ENSTSYG00000011305	RTCA	100	92.350	ENSGGOG00000044018	-	100	92.350	Gorilla_gorilla
ENSTSYG00000011305	RTCA	100	69.755	ENSHBUG00000002114	rtca	99	69.755	Haplochromis_burtoni
ENSTSYG00000011305	RTCA	100	93.169	ENSHGLG00000002617	RTCA	100	93.169	Heterocephalus_glaber_female
ENSTSYG00000011305	RTCA	100	93.169	ENSHGLG00100006056	RTCA	100	93.169	Heterocephalus_glaber_male
ENSTSYG00000011305	RTCA	100	63.934	ENSHCOG00000020628	rtca	89	63.934	Hippocampus_comes
ENSTSYG00000011305	RTCA	100	72.131	ENSIPUG00000024803	rtca	100	72.131	Ictalurus_punctatus
ENSTSYG00000011305	RTCA	100	87.432	ENSSTOG00000013528	-	100	87.432	Ictidomys_tridecemlineatus
ENSTSYG00000011305	RTCA	100	82.561	ENSSTOG00000033099	-	100	82.561	Ictidomys_tridecemlineatus
ENSTSYG00000011305	RTCA	100	68.033	ENSJJAG00000016178	Rtca	100	68.033	Jaculus_jaculus
ENSTSYG00000011305	RTCA	99	71.468	ENSKMAG00000006651	rtca	98	71.468	Kryptolebias_marmoratus
ENSTSYG00000011305	RTCA	99	68.975	ENSLBEG00000028971	rtca	99	68.975	Labrus_bergylta
ENSTSYG00000011305	RTCA	88	68.847	ENSLBEG00000002448	-	99	68.847	Labrus_bergylta
ENSTSYG00000011305	RTCA	100	78.142	ENSLACG00000013666	RTCA	100	78.142	Latimeria_chalumnae
ENSTSYG00000011305	RTCA	100	72.404	ENSLOCG00000000093	rtca	99	72.404	Lepisosteus_oculatus
ENSTSYG00000011305	RTCA	100	92.623	ENSLAFG00000001473	RTCA	100	92.623	Loxodonta_africana
ENSTSYG00000011305	RTCA	100	93.169	ENSMFAG00000034132	RTCA	100	93.169	Macaca_fascicularis
ENSTSYG00000011305	RTCA	100	92.623	ENSMMUG00000019105	RTCA	100	92.623	Macaca_mulatta
ENSTSYG00000011305	RTCA	84	92.880	ENSMNEG00000037163	RTCA	100	92.880	Macaca_nemestrina
ENSTSYG00000011305	RTCA	100	76.503	ENSMLEG00000042151	RTCA	100	76.503	Mandrillus_leucophaeus
ENSTSYG00000011305	RTCA	100	71.858	ENSMAMG00000016536	rtca	100	71.858	Mastacembelus_armatus
ENSTSYG00000011305	RTCA	100	70.027	ENSMZEG00005017945	rtca	99	70.027	Maylandia_zebra
ENSTSYG00000011305	RTCA	87	80.878	ENSMGAG00000006892	RTCA	99	80.878	Meleagris_gallopavo
ENSTSYG00000011305	RTCA	100	91.530	ENSMAUG00000008488	Rtca	100	91.530	Mesocricetus_auratus
ENSTSYG00000011305	RTCA	84	94.175	ENSMICG00000008643	RTCA	100	94.175	Microcebus_murinus
ENSTSYG00000011305	RTCA	100	92.896	ENSMOCG00000016660	Rtca	100	92.896	Microtus_ochrogaster
ENSTSYG00000011305	RTCA	84	72.492	ENSMMOG00000007750	rtca	100	72.492	Mola_mola
ENSTSYG00000011305	RTCA	100	90.164	ENSMODG00000003557	RTCA	100	90.164	Monodelphis_domestica
ENSTSYG00000011305	RTCA	100	72.131	ENSMALG00000020844	rtca	100	72.131	Monopterus_albus
ENSTSYG00000011305	RTCA	100	91.257	MGP_CAROLIEiJ_G0025565	Rtca	100	91.257	Mus_caroli
ENSTSYG00000011305	RTCA	100	90.710	ENSMUSG00000000339	Rtca	100	90.710	Mus_musculus
ENSTSYG00000011305	RTCA	100	90.984	MGP_PahariEiJ_G0027011	Rtca	100	90.984	Mus_pahari
ENSTSYG00000011305	RTCA	100	90.984	MGP_SPRETEiJ_G0026515	Rtca	100	90.984	Mus_spretus
ENSTSYG00000011305	RTCA	100	94.262	ENSMPUG00000012119	RTCA	100	94.262	Mustela_putorius_furo
ENSTSYG00000011305	RTCA	100	88.556	ENSMLUG00000009922	RTCA	100	88.556	Myotis_lucifugus
ENSTSYG00000011305	RTCA	100	91.803	ENSNGAG00000011540	Rtca	99	91.803	Nannospalax_galili
ENSTSYG00000011305	RTCA	100	70.027	ENSNBRG00000003062	rtca	99	70.027	Neolamprologus_brichardi
ENSTSYG00000011305	RTCA	100	92.896	ENSNLEG00000031426	RTCA	100	92.896	Nomascus_leucogenys
ENSTSYG00000011305	RTCA	59	91.463	ENSMEUG00000010030	-	77	78.788	Notamacropus_eugenii
ENSTSYG00000011305	RTCA	73	88.104	ENSOPRG00000012092	RTCA	71	88.104	Ochotona_princeps
ENSTSYG00000011305	RTCA	95	93.103	ENSODEG00000006990	RTCA	96	93.162	Octodon_degus
ENSTSYG00000011305	RTCA	100	70.027	ENSONIG00000007753	rtca	99	70.027	Oreochromis_niloticus
ENSTSYG00000011305	RTCA	87	86.435	ENSOANG00000012055	RTCA	98	86.435	Ornithorhynchus_anatinus
ENSTSYG00000011305	RTCA	100	94.809	ENSOCUG00000014247	RTCA	100	94.809	Oryctolagus_cuniculus
ENSTSYG00000011305	RTCA	100	70.492	ENSORLG00000013605	rtca	100	70.492	Oryzias_latipes
ENSTSYG00000011305	RTCA	100	70.492	ENSORLG00020001904	rtca	100	70.492	Oryzias_latipes_hni
ENSTSYG00000011305	RTCA	100	70.492	ENSORLG00015021064	rtca	100	70.492	Oryzias_latipes_hsok
ENSTSYG00000011305	RTCA	100	71.311	ENSOMEG00000000756	rtca	100	71.311	Oryzias_melastigma
ENSTSYG00000011305	RTCA	100	84.153	ENSOGAG00000005627	RTCA	100	84.153	Otolemur_garnettii
ENSTSYG00000011305	RTCA	87	92.767	ENSOARG00000018122	RTCA	100	92.767	Ovis_aries
ENSTSYG00000011305	RTCA	100	91.293	ENSPPAG00000035119	RTCA	100	92.233	Pan_paniscus
ENSTSYG00000011305	RTCA	100	94.809	ENSPPRG00000000350	RTCA	100	94.809	Panthera_pardus
ENSTSYG00000011305	RTCA	100	94.536	ENSPTIG00000012816	RTCA	100	94.536	Panthera_tigris_altaica
ENSTSYG00000011305	RTCA	100	91.293	ENSPTRG00000001004	RTCA	100	92.233	Pan_troglodytes
ENSTSYG00000011305	RTCA	100	93.169	ENSPANG00000000346	RTCA	100	93.169	Papio_anubis
ENSTSYG00000011305	RTCA	100	73.497	ENSPKIG00000001653	rtca	100	73.497	Paramormyrops_kingsleyae
ENSTSYG00000011305	RTCA	100	82.787	ENSPSIG00000011408	RTCA	100	82.787	Pelodiscus_sinensis
ENSTSYG00000011305	RTCA	100	92.077	ENSPEMG00000018582	Rtca	100	92.077	Peromyscus_maniculatus_bairdii
ENSTSYG00000011305	RTCA	99	59.392	ENSPMAG00000009110	rtca	100	58.311	Petromyzon_marinus
ENSTSYG00000011305	RTCA	100	90.710	ENSPCIG00000007684	RTCA	100	90.710	Phascolarctos_cinereus
ENSTSYG00000011305	RTCA	100	71.935	ENSPFOG00000004824	rtca	100	71.935	Poecilia_formosa
ENSTSYG00000011305	RTCA	100	72.131	ENSPLAG00000011753	rtca	99	72.131	Poecilia_latipinna
ENSTSYG00000011305	RTCA	100	72.131	ENSPMEG00000020469	rtca	99	72.131	Poecilia_mexicana
ENSTSYG00000011305	RTCA	100	72.951	ENSPREG00000001365	rtca	99	72.951	Poecilia_reticulata
ENSTSYG00000011305	RTCA	100	92.896	ENSPPYG00000001115	RTCA	100	92.896	Pongo_abelii
ENSTSYG00000011305	RTCA	100	88.798	ENSPCAG00000005076	RTCA	100	88.798	Procavia_capensis
ENSTSYG00000011305	RTCA	100	94.809	ENSPCOG00000005603	RTCA	100	94.809	Propithecus_coquereli
ENSTSYG00000011305	RTCA	100	92.084	ENSPVAG00000009478	RTCA	100	92.084	Pteropus_vampyrus
ENSTSYG00000011305	RTCA	100	70.027	ENSPNYG00000004722	rtca	99	70.027	Pundamilia_nyererei
ENSTSYG00000011305	RTCA	100	71.858	ENSPNAG00000022270	rtca	100	71.858	Pygocentrus_nattereri
ENSTSYG00000011305	RTCA	100	91.257	ENSRNOG00000014575	Rtca	100	91.257	Rattus_norvegicus
ENSTSYG00000011305	RTCA	100	91.293	ENSRBIG00000041180	RTCA	100	91.909	Rhinopithecus_bieti
ENSTSYG00000011305	RTCA	100	92.350	ENSRROG00000024929	RTCA	100	92.350	Rhinopithecus_roxellana
ENSTSYG00000011305	RTCA	100	92.350	ENSSBOG00000028626	RTCA	100	92.350	Saimiri_boliviensis_boliviensis
ENSTSYG00000011305	RTCA	100	90.710	ENSSHAG00000001758	RTCA	100	90.710	Sarcophilus_harrisii
ENSTSYG00000011305	RTCA	98	69.167	ENSSMAG00000014680	rtca	97	69.167	Scophthalmus_maximus
ENSTSYG00000011305	RTCA	98	70.833	ENSSDUG00000015585	rtca	97	70.833	Seriola_dumerili
ENSTSYG00000011305	RTCA	96	71.510	ENSSLDG00000018985	rtca	95	71.510	Seriola_lalandi_dorsalis
ENSTSYG00000011305	RTCA	87	84.543	ENSSARG00000013993	RTCA	100	84.543	Sorex_araneus
ENSTSYG00000011305	RTCA	100	69.945	ENSSPAG00000011938	rtca	99	69.945	Stegastes_partitus
ENSTSYG00000011305	RTCA	100	93.716	ENSSSCG00000006865	RTCA	100	93.716	Sus_scrofa
ENSTSYG00000011305	RTCA	100	82.240	ENSTGUG00000005154	RTCA	100	82.240	Taeniopygia_guttata
ENSTSYG00000011305	RTCA	100	71.311	ENSTRUG00000008799	rtca	100	71.311	Takifugu_rubripes
ENSTSYG00000011305	RTCA	100	72.404	ENSTNIG00000004725	rtca	100	72.404	Tetraodon_nigroviridis
ENSTSYG00000011305	RTCA	60	89.091	ENSTBEG00000000943	RTCA	82	66.387	Tupaia_belangeri
ENSTSYG00000011305	RTCA	100	91.557	ENSTTRG00000015327	RTCA	100	91.557	Tursiops_truncatus
ENSTSYG00000011305	RTCA	94	91.545	ENSUAMG00000017265	RTCA	96	91.545	Ursus_americanus
ENSTSYG00000011305	RTCA	100	93.169	ENSUMAG00000007881	RTCA	100	93.169	Ursus_maritimus
ENSTSYG00000011305	RTCA	87	83.281	ENSVPAG00000001039	RTCA	87	82.675	Vicugna_pacos
ENSTSYG00000011305	RTCA	100	93.443	ENSVVUG00000022041	RTCA	68	93.443	Vulpes_vulpes
ENSTSYG00000011305	RTCA	99	64.384	ENSXETG00000031661	RTCA	99	64.384	Xenopus_tropicalis
ENSTSYG00000011305	RTCA	100	63.115	ENSXCOG00000008002	rtca	100	63.115	Xiphophorus_couchianus
ENSTSYG00000011305	RTCA	100	72.131	ENSXMAG00000005482	rtca	99	72.131	Xiphophorus_maculatus