EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTSYG00000011344 (Gene tree)
Gene ID: 103250292
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Minus strand
Length: 38996 bases
Position: chrKE929862.1:51348-90343
Accession: 103250292
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000014601	RRM_1	PF00076.22	2.3e-09	1	1
ENSTSYP00000010410	RRM_1	PF00076.22	2.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000032117	SCAF4-202	3060	-	ENSTSYP00000014601	1019 (aa)	-	UPI000C2F6557
ENSTSYT00000011345	SCAF4-201	3105	XM_008048881	ENSTSYP00000010410	1034 (aa)	-	UPI000C2F4261

Gene Model

Click here to download ENSTSYG00000011344's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000011344's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000011344	SCAF4	99	96.141	ENSG00000156304	SCAF4	91	96.141	Homo_sapiens
ENSTSYG00000011344	SCAF4	82	54.861	ENSAPOG00000002946	scaf4a	54	57.121	Acanthochromis_polyacanthus
ENSTSYG00000011344	SCAF4	60	55.482	ENSAPOG00000019615	scaf4b	62	60.456	Acanthochromis_polyacanthus
ENSTSYG00000011344	SCAF4	70	97.312	ENSAMEG00000014987	SCAF4	87	97.213	Ailuropoda_melanoleuca
ENSTSYG00000011344	SCAF4	52	64.734	ENSAOCG00000010433	scaf4b	53	73.418	Amphiprion_ocellaris
ENSTSYG00000011344	SCAF4	52	64.734	ENSAPEG00000010913	scaf4b	53	73.418	Amphiprion_percula
ENSTSYG00000011344	SCAF4	57	56.800	ENSATEG00000011758	scaf4b	54	72.222	Anabas_testudineus
ENSTSYG00000011344	SCAF4	99	77.180	ENSAPLG00000002509	SCAF4	59	85.331	Anas_platyrhynchos
ENSTSYG00000011344	SCAF4	99	62.899	ENSACAG00000002569	SCAF4	51	84.146	Anolis_carolinensis
ENSTSYG00000011344	SCAF4	99	96.595	ENSANAG00000037494	SCAF4	91	96.595	Aotus_nancymaae
ENSTSYG00000011344	SCAF4	58	56.654	ENSACLG00000024833	scaf4b	53	74.051	Astatotilapia_calliptera
ENSTSYG00000011344	SCAF4	98	93.179	ENSBTAG00000018855	SCAF4	92	93.190	Bos_taurus
ENSTSYG00000011344	SCAF4	99	96.591	ENSCJAG00000008993	SCAF4	99	95.990	Callithrix_jacchus
ENSTSYG00000011344	SCAF4	98	94.890	ENSCAFG00000008863	SCAF4	92	94.869	Canis_familiaris
ENSTSYG00000011344	SCAF4	98	92.025	ENSCAFG00020026019	SCAF4	92	94.032	Canis_lupus_dingo
ENSTSYG00000011344	SCAF4	98	92.290	ENSCHIG00000008385	SCAF4	92	92.316	Capra_hircus
ENSTSYG00000011344	SCAF4	98	91.160	ENSCPOG00000012443	SCAF4	92	91.236	Cavia_porcellus
ENSTSYG00000011344	SCAF4	99	96.591	ENSCCAG00000033727	SCAF4	91	96.591	Cebus_capucinus
ENSTSYG00000011344	SCAF4	99	97.015	ENSCATG00000030379	SCAF4	91	97.015	Cercocebus_atys
ENSTSYG00000011344	SCAF4	98	92.423	ENSCLAG00000006298	SCAF4	91	92.247	Chinchilla_lanigera
ENSTSYG00000011344	SCAF4	99	95.588	ENSCSAG00000009438	SCAF4	91	95.588	Chlorocebus_sabaeus
ENSTSYG00000011344	SCAF4	99	95.800	ENSCANG00000029847	SCAF4	91	95.800	Colobus_angolensis_palliatus
ENSTSYG00000011344	SCAF4	65	93.964	ENSCGRG00001020821	Scaf4	92	87.117	Cricetulus_griseus_chok1gshd
ENSTSYG00000011344	SCAF4	98	87.117	ENSCGRG00000014360	Scaf4	91	87.282	Cricetulus_griseus_crigri
ENSTSYG00000011344	SCAF4	70	46.562	ENSCSEG00000012808	-	59	60.500	Cynoglossus_semilaevis
ENSTSYG00000011344	SCAF4	84	53.129	ENSCSEG00000019549	scaf4a	52	55.243	Cynoglossus_semilaevis
ENSTSYG00000011344	SCAF4	98	92.638	ENSDNOG00000019014	SCAF4	86	92.638	Dasypus_novemcinctus
ENSTSYG00000011344	SCAF4	89	96.552	ENSETEG00000000583	SCAF4	85	96.552	Echinops_telfairi
ENSTSYG00000011344	SCAF4	98	94.322	ENSEASG00005007756	SCAF4	91	94.312	Equus_asinus_asinus
ENSTSYG00000011344	SCAF4	98	94.322	ENSECAG00000014248	SCAF4	91	94.312	Equus_caballus
ENSTSYG00000011344	SCAF4	98	93.556	ENSFCAG00000002228	SCAF4	92	93.559	Felis_catus
ENSTSYG00000011344	SCAF4	98	89.605	ENSFDAG00000017780	SCAF4	92	89.712	Fukomys_damarensis
ENSTSYG00000011344	SCAF4	53	56.981	ENSFHEG00000007634	scaf4b	53	71.519	Fundulus_heteroclitus
ENSTSYG00000011344	SCAF4	50	70.122	ENSGACG00000020580	scaf4a	53	70.122	Gasterosteus_aculeatus
ENSTSYG00000011344	SCAF4	72	97.778	ENSGGOG00000015557	SCAF4	73	95.046	Gorilla_gorilla
ENSTSYG00000011344	SCAF4	98	92.922	ENSHGLG00000010582	SCAF4	92	92.849	Heterocephalus_glaber_female
ENSTSYG00000011344	SCAF4	98	92.890	ENSHGLG00100009441	SCAF4	92	92.817	Heterocephalus_glaber_male
ENSTSYG00000011344	SCAF4	89	46.459	ENSIPUG00000011285	scaf4	62	63.764	Ictalurus_punctatus
ENSTSYG00000011344	SCAF4	98	91.411	ENSSTOG00000004450	SCAF4	92	91.411	Ictidomys_tridecemlineatus
ENSTSYG00000011344	SCAF4	98	92.308	ENSJJAG00000019447	Scaf4	92	92.123	Jaculus_jaculus
ENSTSYG00000011344	SCAF4	98	60.534	ENSLACG00000013913	SCAF4	59	70.189	Latimeria_chalumnae
ENSTSYG00000011344	SCAF4	94	58.741	ENSLOCG00000009162	scaf4a	88	68.356	Lepisosteus_oculatus
ENSTSYG00000011344	SCAF4	99	97.917	ENSLAFG00000010710	SCAF4	92	93.431	Loxodonta_africana
ENSTSYG00000011344	SCAF4	99	97.015	ENSMFAG00000037668	SCAF4	91	97.015	Macaca_fascicularis
ENSTSYG00000011344	SCAF4	99	95.687	ENSMMUG00000001712	SCAF4	91	95.687	Macaca_mulatta
ENSTSYG00000011344	SCAF4	99	96.900	ENSMNEG00000032966	SCAF4	91	96.900	Macaca_nemestrina
ENSTSYG00000011344	SCAF4	99	95.800	ENSMLEG00000039674	SCAF4	91	95.800	Mandrillus_leucophaeus
ENSTSYG00000011344	SCAF4	98	89.895	ENSMAUG00000013307	Scaf4	92	89.863	Mesocricetus_auratus
ENSTSYG00000011344	SCAF4	99	97.235	ENSMICG00000005256	SCAF4	92	97.235	Microcebus_murinus
ENSTSYG00000011344	SCAF4	82	84.465	ENSMOCG00000012087	Scaf4	99	82.011	Microtus_ochrogaster
ENSTSYG00000011344	SCAF4	99	78.818	ENSMODG00000021040	SCAF4	99	80.692	Monodelphis_domestica
ENSTSYG00000011344	SCAF4	98	84.663	MGP_CAROLIEiJ_G0020944	Scaf4	91	87.241	Mus_caroli
ENSTSYG00000011344	SCAF4	98	84.049	ENSMUSG00000022983	Scaf4	99	82.322	Mus_musculus
ENSTSYG00000011344	SCAF4	82	82.818	MGP_PahariEiJ_G0016649	Scaf4	99	83.377	Mus_pahari
ENSTSYG00000011344	SCAF4	98	85.276	MGP_SPRETEiJ_G0021850	Scaf4	99	82.322	Mus_spretus
ENSTSYG00000011344	SCAF4	98	93.880	ENSMPUG00000001078	SCAF4	91	93.884	Mustela_putorius_furo
ENSTSYG00000011344	SCAF4	98	91.160	ENSNGAG00000005214	Scaf4	91	92.438	Nannospalax_galili
ENSTSYG00000011344	SCAF4	99	96.141	ENSNLEG00000003569	SCAF4	91	96.141	Nomascus_leucogenys
ENSTSYG00000011344	SCAF4	88	95.588	ENSOPRG00000007016	SCAF4	74	93.836	Ochotona_princeps
ENSTSYG00000011344	SCAF4	83	90.101	ENSODEG00000002718	SCAF4	92	90.187	Octodon_degus
ENSTSYG00000011344	SCAF4	98	90.323	ENSOCUG00000008336	SCAF4	91	90.385	Oryctolagus_cuniculus
ENSTSYG00000011344	SCAF4	56	57.480	ENSORLG00000003420	scaf4b	65	58.650	Oryzias_latipes
ENSTSYG00000011344	SCAF4	98	98.273	ENSOGAG00000014653	SCAF4	86	98.138	Otolemur_garnettii
ENSTSYG00000011344	SCAF4	98	91.002	ENSOARG00000013894	SCAF4	91	91.901	Ovis_aries
ENSTSYG00000011344	SCAF4	99	96.141	ENSPPAG00000028535	SCAF4	91	96.141	Pan_paniscus
ENSTSYG00000011344	SCAF4	98	93.541	ENSPPRG00000000635	SCAF4	78	93.545	Panthera_pardus
ENSTSYG00000011344	SCAF4	96	94.471	ENSPTIG00000021578	SCAF4	92	92.520	Panthera_tigris_altaica
ENSTSYG00000011344	SCAF4	99	96.141	ENSPTRG00000013848	SCAF4	91	96.141	Pan_troglodytes
ENSTSYG00000011344	SCAF4	99	95.800	ENSPANG00000017332	SCAF4	91	95.696	Papio_anubis
ENSTSYG00000011344	SCAF4	69	64.402	ENSPKIG00000022408	scaf4a	89	67.388	Paramormyrops_kingsleyae
ENSTSYG00000011344	SCAF4	99	77.214	ENSPSIG00000014242	SCAF4	57	85.782	Pelodiscus_sinensis
ENSTSYG00000011344	SCAF4	51	55.426	ENSPLAG00000004403	-	57	64.286	Poecilia_latipinna
ENSTSYG00000011344	SCAF4	51	55.814	ENSPMEG00000006666	-	52	71.975	Poecilia_mexicana
ENSTSYG00000011344	SCAF4	99	96.254	ENSPPYG00000011355	SCAF4	92	96.237	Pongo_abelii
ENSTSYG00000011344	SCAF4	91	93.704	ENSPCAG00000009998	SCAF4	85	93.704	Procavia_capensis
ENSTSYG00000011344	SCAF4	99	97.120	ENSPCOG00000018710	SCAF4	91	97.120	Propithecus_coquereli
ENSTSYG00000011344	SCAF4	98	93.279	ENSPVAG00000005220	SCAF4	92	93.402	Pteropus_vampyrus
ENSTSYG00000011344	SCAF4	58	56.654	ENSPNYG00000010526	scaf4b	53	74.051	Pundamilia_nyererei
ENSTSYG00000011344	SCAF4	96	86.503	ENSRNOG00000002104	Scaf4	91	86.503	Rattus_norvegicus
ENSTSYG00000011344	SCAF4	99	94.604	ENSRBIG00000040007	SCAF4	91	94.604	Rhinopithecus_bieti
ENSTSYG00000011344	SCAF4	99	95.800	ENSRROG00000029488	SCAF4	92	94.917	Rhinopithecus_roxellana
ENSTSYG00000011344	SCAF4	99	78.285	ENSSHAG00000001581	SCAF4	99	80.748	Sarcophilus_harrisii
ENSTSYG00000011344	SCAF4	65	59.245	ENSSMAG00000003738	scaf4b	52	71.519	Scophthalmus_maximus
ENSTSYG00000011344	SCAF4	68	52.424	ENSSLDG00000023152	-	53	70.886	Seriola_lalandi_dorsalis
ENSTSYG00000011344	SCAF4	98	92.782	ENSSARG00000009994	SCAF4	90	92.800	Sorex_araneus
ENSTSYG00000011344	SCAF4	98	90.378	ENSSSCG00000021023	SCAF4	91	90.664	Sus_scrofa
ENSTSYG00000011344	SCAF4	99	66.213	ENSTGUG00000013464	SCAF4	57	86.047	Taeniopygia_guttata
ENSTSYG00000011344	SCAF4	54	58.113	ENSTRUG00000009536	-	63	57.604	Takifugu_rubripes
ENSTSYG00000011344	SCAF4	98	93.735	ENSTTRG00000010963	SCAF4	92	93.736	Tursiops_truncatus
ENSTSYG00000011344	SCAF4	98	91.647	ENSUAMG00000008860	SCAF4	91	91.686	Ursus_americanus
ENSTSYG00000011344	SCAF4	98	92.925	ENSUMAG00000016962	SCAF4	100	86.456	Ursus_maritimus
ENSTSYG00000011344	SCAF4	98	94.866	ENSVVUG00000002953	SCAF4	92	94.845	Vulpes_vulpes
ENSTSYG00000011344	SCAF4	99	56.625	ENSXETG00000007351	scaf4	62	66.959	Xenopus_tropicalis