EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTSYG00000011668 (Gene tree)
Gene ID: 103266433
Gene Symbol: YTHDC1
Alias: -
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Minus strand
Length: 41185 bases
Position: chrKE942647.1:153607-194791
Accession: 103266433
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000010739	YTH	PF04146.15	8.5e-40	1	1
ENSTSYP00000016876	YTH	PF04146.15	8.9e-40	1	1
ENSTSYP00000026417	YTH	PF04146.15	9.1e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000011710	YTHDC1-202	2130	-	ENSTSYP00000010739	709 (aa)	XP_021571215	UPI000B535400
ENSTSYT00000041008	YTHDC1-201	3307	XM_008064047	ENSTSYP00000016876	727 (aa)	XP_008062238	A0A1U7U0J0
ENSTSYT00000036064	YTHDC1-203	2127	-	ENSTSYP00000026417	708 (aa)	-	UPI000C2F4D7D

Gene Model

Click here to download ENSTSYG00000011668's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000011668's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000011668	YTHDC1	100	99.037	ENSG00000083896	YTHDC1	100	99.037	Homo_sapiens
ENSTSYG00000011668	YTHDC1	57	59.759	ENSAPOG00000013997	ythdc1	57	62.768	Acanthochromis_polyacanthus
ENSTSYG00000011668	YTHDC1	100	97.674	ENSAMEG00000005688	YTHDC1	100	97.674	Ailuropoda_melanoleuca
ENSTSYG00000011668	YTHDC1	71	58.513	ENSACIG00000019728	ythdc1	80	60.048	Amphilophus_citrinellus
ENSTSYG00000011668	YTHDC1	57	61.468	ENSAOCG00000000239	ythdc1	59	67.703	Amphiprion_ocellaris
ENSTSYG00000011668	YTHDC1	91	85.090	ENSAPLG00000009921	YTHDC1	92	86.747	Anas_platyrhynchos
ENSTSYG00000011668	YTHDC1	93	83.828	ENSACAG00000009697	YTHDC1	93	83.680	Anolis_carolinensis
ENSTSYG00000011668	YTHDC1	100	98.901	ENSANAG00000001522	YTHDC1	100	98.901	Aotus_nancymaae
ENSTSYG00000011668	YTHDC1	92	52.117	ENSACLG00000019371	ythdc1	59	66.362	Astatotilapia_calliptera
ENSTSYG00000011668	YTHDC1	93	64.358	ENSAMXG00000006978	ythdc1	92	65.847	Astyanax_mexicanus
ENSTSYG00000011668	YTHDC1	100	97.668	ENSBTAG00000015572	YTHDC1	100	97.668	Bos_taurus
ENSTSYG00000011668	YTHDC1	100	99.313	ENSCJAG00000009934	YTHDC1	100	99.313	Callithrix_jacchus
ENSTSYG00000011668	YTHDC1	100	97.538	ENSCAFG00000002821	YTHDC1	100	97.538	Canis_familiaris
ENSTSYG00000011668	YTHDC1	100	97.538	ENSCAFG00020027112	YTHDC1	100	97.538	Canis_lupus_dingo
ENSTSYG00000011668	YTHDC1	100	93.239	ENSCHIG00000004810	YTHDC1	98	93.239	Capra_hircus
ENSTSYG00000011668	YTHDC1	90	71.205	ENSCAPG00000008722	YTHDC1	90	70.279	Cavia_aperea
ENSTSYG00000011668	YTHDC1	100	91.334	ENSCPOG00000010929	YTHDC1	100	91.334	Cavia_porcellus
ENSTSYG00000011668	YTHDC1	100	99.312	ENSCCAG00000035754	YTHDC1	100	99.312	Cebus_capucinus
ENSTSYG00000011668	YTHDC1	100	98.873	ENSCATG00000036320	YTHDC1	100	98.873	Cercocebus_atys
ENSTSYG00000011668	YTHDC1	99	97.854	ENSCLAG00000005482	YTHDC1	99	97.854	Chinchilla_lanigera
ENSTSYG00000011668	YTHDC1	100	98.901	ENSCSAG00000005252	YTHDC1	100	98.901	Chlorocebus_sabaeus
ENSTSYG00000011668	YTHDC1	92	86.736	ENSCPBG00000021965	YTHDC1	94	87.654	Chrysemys_picta_bellii
ENSTSYG00000011668	YTHDC1	100	99.038	ENSCANG00000004769	YTHDC1	100	99.038	Colobus_angolensis_palliatus
ENSTSYG00000011668	YTHDC1	100	97.320	ENSCGRG00001000816	Ythdc1	100	97.320	Cricetulus_griseus_chok1gshd
ENSTSYG00000011668	YTHDC1	99	97.354	ENSCGRG00000009807	Ythdc1	99	97.354	Cricetulus_griseus_crigri
ENSTSYG00000011668	YTHDC1	57	60.352	ENSCSEG00000020404	ythdc1	59	66.906	Cynoglossus_semilaevis
ENSTSYG00000011668	YTHDC1	57	59.424	ENSCVAG00000022349	ythdc1	59	65.783	Cyprinodon_variegatus
ENSTSYG00000011668	YTHDC1	93	63.796	ENSDARG00000051953	ythdc1	58	78.378	Danio_rerio
ENSTSYG00000011668	YTHDC1	100	97.390	ENSDNOG00000004949	YTHDC1	100	97.390	Dasypus_novemcinctus
ENSTSYG00000011668	YTHDC1	99	98.470	ENSDORG00000013045	Ythdc1	100	98.470	Dipodomys_ordii
ENSTSYG00000011668	YTHDC1	78	100.000	ENSETEG00000001878	YTHDC1	70	100.000	Echinops_telfairi
ENSTSYG00000011668	YTHDC1	100	98.222	ENSEASG00005018383	YTHDC1	100	98.222	Equus_asinus_asinus
ENSTSYG00000011668	YTHDC1	100	97.674	ENSECAG00000018303	YTHDC1	100	97.674	Equus_caballus
ENSTSYG00000011668	YTHDC1	100	96.571	ENSEEUG00000015466	YTHDC1	100	96.571	Erinaceus_europaeus
ENSTSYG00000011668	YTHDC1	93	62.147	ENSELUG00000014029	ythdc1	95	63.142	Esox_lucius
ENSTSYG00000011668	YTHDC1	100	97.534	ENSFCAG00000026791	YTHDC1	100	97.534	Felis_catus
ENSTSYG00000011668	YTHDC1	68	89.679	ENSFALG00000006581	YTHDC1	87	93.917	Ficedula_albicollis
ENSTSYG00000011668	YTHDC1	99	97.908	ENSFDAG00000018560	YTHDC1	100	97.908	Fukomys_damarensis
ENSTSYG00000011668	YTHDC1	65	58.730	ENSFHEG00000001286	ythdc1	60	56.325	Fundulus_heteroclitus
ENSTSYG00000011668	YTHDC1	64	64.311	ENSGMOG00000018815	ythdc1	79	64.311	Gadus_morhua
ENSTSYG00000011668	YTHDC1	92	85.970	ENSGALG00000035906	YTHDC1	85	86.295	Gallus_gallus
ENSTSYG00000011668	YTHDC1	51	65.233	ENSGAFG00000001759	ythdc1	54	67.391	Gambusia_affinis
ENSTSYG00000011668	YTHDC1	57	62.383	ENSGACG00000015486	ythdc1	57	62.774	Gasterosteus_aculeatus
ENSTSYG00000011668	YTHDC1	93	85.630	ENSGAGG00000007108	YTHDC1	93	85.484	Gopherus_agassizii
ENSTSYG00000011668	YTHDC1	100	98.873	ENSGGOG00000021958	YTHDC1	100	98.873	Gorilla_gorilla
ENSTSYG00000011668	YTHDC1	92	52.263	ENSHBUG00000019288	ythdc1	59	66.362	Haplochromis_burtoni
ENSTSYG00000011668	YTHDC1	100	97.602	ENSHGLG00000006319	-	100	97.602	Heterocephalus_glaber_female
ENSTSYG00000011668	YTHDC1	94	70.803	ENSHGLG00000003239	-	57	78.708	Heterocephalus_glaber_female
ENSTSYG00000011668	YTHDC1	100	96.717	ENSHGLG00100001556	-	100	96.717	Heterocephalus_glaber_male
ENSTSYG00000011668	YTHDC1	94	69.331	ENSHGLG00100008060	-	57	76.247	Heterocephalus_glaber_male
ENSTSYG00000011668	YTHDC1	54	70.213	ENSHCOG00000001520	ythdc1	84	70.213	Hippocampus_comes
ENSTSYG00000011668	YTHDC1	93	67.394	ENSIPUG00000018136	ythdc1	61	83.759	Ictalurus_punctatus
ENSTSYG00000011668	YTHDC1	100	97.690	ENSSTOG00000013652	YTHDC1	100	97.690	Ictidomys_tridecemlineatus
ENSTSYG00000011668	YTHDC1	91	92.093	ENSJJAG00000010268	Ythdc1	93	92.262	Jaculus_jaculus
ENSTSYG00000011668	YTHDC1	57	60.502	ENSKMAG00000006483	ythdc1	85	65.533	Kryptolebias_marmoratus
ENSTSYG00000011668	YTHDC1	64	63.462	ENSLBEG00000020831	ythdc1	72	75.000	Labrus_bergylta
ENSTSYG00000011668	YTHDC1	87	73.940	ENSLACG00000004893	YTHDC1	92	74.022	Latimeria_chalumnae
ENSTSYG00000011668	YTHDC1	93	73.225	ENSLOCG00000003045	ythdc1	92	88.702	Lepisosteus_oculatus
ENSTSYG00000011668	YTHDC1	100	96.190	ENSLAFG00000021592	YTHDC1	100	96.190	Loxodonta_africana
ENSTSYG00000011668	YTHDC1	100	99.014	ENSMFAG00000031927	YTHDC1	100	99.014	Macaca_fascicularis
ENSTSYG00000011668	YTHDC1	100	99.038	ENSMMUG00000002265	YTHDC1	100	99.038	Macaca_mulatta
ENSTSYG00000011668	YTHDC1	100	99.038	ENSMNEG00000033751	YTHDC1	100	99.038	Macaca_nemestrina
ENSTSYG00000011668	YTHDC1	100	98.901	ENSMLEG00000042147	YTHDC1	100	98.901	Mandrillus_leucophaeus
ENSTSYG00000011668	YTHDC1	55	61.871	ENSMAMG00000013122	ythdc1	58	66.826	Mastacembelus_armatus
ENSTSYG00000011668	YTHDC1	92	52.117	ENSMZEG00005023173	ythdc1	59	66.362	Maylandia_zebra
ENSTSYG00000011668	YTHDC1	93	84.866	ENSMGAG00000010391	YTHDC1	92	86.499	Meleagris_gallopavo
ENSTSYG00000011668	YTHDC1	100	97.038	ENSMAUG00000001286	Ythdc1	100	97.038	Mesocricetus_auratus
ENSTSYG00000011668	YTHDC1	100	97.422	ENSMICG00000034640	YTHDC1	100	97.422	Microcebus_murinus
ENSTSYG00000011668	YTHDC1	100	97.320	ENSMOCG00000020201	Ythdc1	100	97.320	Microtus_ochrogaster
ENSTSYG00000011668	YTHDC1	96	51.714	ENSMODG00000010076	-	96	52.303	Monodelphis_domestica
ENSTSYG00000011668	YTHDC1	87	69.476	ENSMODG00000014337	-	95	69.830	Monodelphis_domestica
ENSTSYG00000011668	YTHDC1	93	89.896	ENSMODG00000020754	-	92	88.856	Monodelphis_domestica
ENSTSYG00000011668	YTHDC1	65	57.872	ENSMODG00000009173	-	88	61.594	Monodelphis_domestica
ENSTSYG00000011668	YTHDC1	58	67.797	ENSMALG00000013412	ythdc1	56	68.857	Monopterus_albus
ENSTSYG00000011668	YTHDC1	93	95.104	MGP_CAROLIEiJ_G0027347	Ythdc1	97	92.687	Mus_caroli
ENSTSYG00000011668	YTHDC1	100	96.982	ENSMUSG00000035851	Ythdc1	100	96.982	Mus_musculus
ENSTSYG00000011668	YTHDC1	100	97.257	MGP_PahariEiJ_G0017126	Ythdc1	100	97.257	Mus_pahari
ENSTSYG00000011668	YTHDC1	100	97.257	MGP_SPRETEiJ_G0028339	Ythdc1	100	97.257	Mus_spretus
ENSTSYG00000011668	YTHDC1	99	97.629	ENSMLUG00000016300	YTHDC1	100	97.629	Myotis_lucifugus
ENSTSYG00000011668	YTHDC1	59	96.675	ENSNGAG00000024000	Ythdc1	93	96.675	Nannospalax_galili
ENSTSYG00000011668	YTHDC1	60	57.632	ENSNBRG00000007663	ythdc1	70	66.589	Neolamprologus_brichardi
ENSTSYG00000011668	YTHDC1	99	96.974	ENSNLEG00000009202	YTHDC1	99	96.974	Nomascus_leucogenys
ENSTSYG00000011668	YTHDC1	82	81.940	ENSMEUG00000007128	YTHDC1	81	81.940	Notamacropus_eugenii
ENSTSYG00000011668	YTHDC1	75	99.150	ENSOPRG00000008986	YTHDC1	74	99.150	Ochotona_princeps
ENSTSYG00000011668	YTHDC1	100	97.387	ENSODEG00000001715	YTHDC1	100	97.387	Octodon_degus
ENSTSYG00000011668	YTHDC1	92	52.691	ENSONIG00000012651	ythdc1	59	66.819	Oreochromis_niloticus
ENSTSYG00000011668	YTHDC1	88	76.031	ENSOANG00000014398	YTHDC1	55	95.443	Ornithorhynchus_anatinus
ENSTSYG00000011668	YTHDC1	93	82.396	ENSOCUG00000015886	YTHDC1	57	95.729	Oryctolagus_cuniculus
ENSTSYG00000011668	YTHDC1	56	61.111	ENSORLG00000030544	ythdc1	60	66.988	Oryzias_latipes
ENSTSYG00000011668	YTHDC1	56	60.386	ENSORLG00020019316	ythdc1	60	66.988	Oryzias_latipes_hni
ENSTSYG00000011668	YTHDC1	56	61.520	ENSOMEG00000000551	ythdc1	60	65.526	Oryzias_melastigma
ENSTSYG00000011668	YTHDC1	100	97.799	ENSOGAG00000003362	YTHDC1	100	97.799	Otolemur_garnettii
ENSTSYG00000011668	YTHDC1	100	97.668	ENSOARG00000008633	YTHDC1	100	97.668	Ovis_aries
ENSTSYG00000011668	YTHDC1	100	99.013	ENSPPAG00000041315	YTHDC1	100	99.013	Pan_paniscus
ENSTSYG00000011668	YTHDC1	100	97.612	ENSPPRG00000011979	YTHDC1	100	97.612	Panthera_pardus
ENSTSYG00000011668	YTHDC1	99	97.293	ENSPTIG00000015527	YTHDC1	100	97.293	Panthera_tigris_altaica
ENSTSYG00000011668	YTHDC1	100	99.013	ENSPTRG00000016105	YTHDC1	100	99.013	Pan_troglodytes
ENSTSYG00000011668	YTHDC1	100	98.873	ENSPANG00000021590	YTHDC1	100	98.873	Papio_anubis
ENSTSYG00000011668	YTHDC1	93	69.242	ENSPKIG00000018497	ythdc1	93	69.041	Paramormyrops_kingsleyae
ENSTSYG00000011668	YTHDC1	91	86.917	ENSPSIG00000002782	YTHDC1	92	86.767	Pelodiscus_sinensis
ENSTSYG00000011668	YTHDC1	55	56.667	ENSPMGG00000000970	-	72	64.808	Periophthalmus_magnuspinnatus
ENSTSYG00000011668	YTHDC1	99	97.629	ENSPEMG00000013850	Ythdc1	100	97.629	Peromyscus_maniculatus_bairdii
ENSTSYG00000011668	YTHDC1	93	89.747	ENSPCIG00000006870	YTHDC1	92	88.707	Phascolarctos_cinereus
ENSTSYG00000011668	YTHDC1	57	59.545	ENSPFOG00000013404	ythdc1	60	65.625	Poecilia_formosa
ENSTSYG00000011668	YTHDC1	57	59.545	ENSPLAG00000011079	ythdc1	85	65.625	Poecilia_latipinna
ENSTSYG00000011668	YTHDC1	57	59.545	ENSPMEG00000009238	ythdc1	60	65.625	Poecilia_mexicana
ENSTSYG00000011668	YTHDC1	71	59.135	ENSPREG00000016973	ythdc1	59	60.050	Poecilia_reticulata
ENSTSYG00000011668	YTHDC1	87	98.892	ENSPPYG00000014726	YTHDC1	100	98.892	Pongo_abelii
ENSTSYG00000011668	YTHDC1	77	94.152	ENSPCAG00000009607	YTHDC1	77	94.152	Procavia_capensis
ENSTSYG00000011668	YTHDC1	100	93.812	ENSPCOG00000019105	YTHDC1	100	93.812	Propithecus_coquereli
ENSTSYG00000011668	YTHDC1	93	92.467	ENSPVAG00000015551	YTHDC1	93	92.614	Pteropus_vampyrus
ENSTSYG00000011668	YTHDC1	92	52.117	ENSPNYG00000011687	ythdc1	59	66.362	Pundamilia_nyererei
ENSTSYG00000011668	YTHDC1	93	69.956	ENSPNAG00000028365	ythdc1	93	69.465	Pygocentrus_nattereri
ENSTSYG00000011668	YTHDC1	100	95.399	ENSRNOG00000001996	Ythdc1	100	95.399	Rattus_norvegicus
ENSTSYG00000011668	YTHDC1	99	96.699	ENSRBIG00000028279	YTHDC1	99	96.699	Rhinopithecus_bieti
ENSTSYG00000011668	YTHDC1	100	99.038	ENSRROG00000035028	YTHDC1	100	99.038	Rhinopithecus_roxellana
ENSTSYG00000011668	YTHDC1	100	99.296	ENSSBOG00000022353	YTHDC1	100	99.296	Saimiri_boliviensis_boliviensis
ENSTSYG00000011668	YTHDC1	93	88.707	ENSSHAG00000002538	YTHDC1	91	88.705	Sarcophilus_harrisii
ENSTSYG00000011668	YTHDC1	93	69.141	ENSSFOG00015003298	ythdc1	60	86.019	Scleropages_formosus
ENSTSYG00000011668	YTHDC1	57	60.314	ENSSMAG00000009086	ythdc1	60	65.947	Scophthalmus_maximus
ENSTSYG00000011668	YTHDC1	55	61.017	ENSSDUG00000022008	ythdc1	59	67.277	Seriola_dumerili
ENSTSYG00000011668	YTHDC1	55	61.017	ENSSLDG00000007926	ythdc1	59	67.277	Seriola_lalandi_dorsalis
ENSTSYG00000011668	YTHDC1	79	98.097	ENSSARG00000010960	YTHDC1	100	98.097	Sorex_araneus
ENSTSYG00000011668	YTHDC1	93	82.718	ENSSPUG00000009357	YTHDC1	92	84.047	Sphenodon_punctatus
ENSTSYG00000011668	YTHDC1	57	62.156	ENSSPAG00000011449	ythdc1	59	67.703	Stegastes_partitus
ENSTSYG00000011668	YTHDC1	99	97.234	ENSSSCG00000035505	YTHDC1	100	96.221	Sus_scrofa
ENSTSYG00000011668	YTHDC1	93	86.350	ENSTGUG00000004452	-	92	86.202	Taeniopygia_guttata
ENSTSYG00000011668	YTHDC1	92	47.606	ENSTRUG00000010142	ythdc1	69	71.795	Takifugu_rubripes
ENSTSYG00000011668	YTHDC1	86	60.304	ENSTNIG00000013243	ythdc1	89	66.279	Tetraodon_nigroviridis
ENSTSYG00000011668	YTHDC1	93	88.410	ENSTBEG00000011546	YTHDC1	92	87.964	Tupaia_belangeri
ENSTSYG00000011668	YTHDC1	100	96.717	ENSTTRG00000005083	YTHDC1	100	96.717	Tursiops_truncatus
ENSTSYG00000011668	YTHDC1	93	97.644	ENSUAMG00000010388	YTHDC1	100	97.644	Ursus_americanus
ENSTSYG00000011668	YTHDC1	99	84.262	ENSUMAG00000013668	YTHDC1	98	84.262	Ursus_maritimus
ENSTSYG00000011668	YTHDC1	100	98.166	ENSVPAG00000009040	YTHDC1	100	98.166	Vicugna_pacos
ENSTSYG00000011668	YTHDC1	99	96.575	ENSVVUG00000005387	YTHDC1	100	97.500	Vulpes_vulpes
ENSTSYG00000011668	YTHDC1	92	74.443	ENSXETG00000017960	ythdc1	91	72.917	Xenopus_tropicalis
ENSTSYG00000011668	YTHDC1	50	52.574	ENSXCOG00000000530	ythdc1	79	56.198	Xiphophorus_couchianus
ENSTSYG00000011668	YTHDC1	57	59.545	ENSXMAG00000005196	ythdc1	61	65.138	Xiphophorus_maculatus