EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTSYG00000011912 (Gene tree)
Gene ID
103259051
Gene Symbol
PUF60
Alias
-
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Carlito_syrichta
Status
putative
Strand
Minus strand
Length
11994 bases
Position
chrKE938729.1:401876-413869
Accession
103259051
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTSYP00000020164RRM_1PF00076.221.9e-4312
ENSTSYP00000020164RRM_1PF00076.221.9e-4322
ENSTSYP00000016854RRM_1PF00076.222e-4312
ENSTSYP00000016854RRM_1PF00076.222e-4322
ENSTSYP00000014305RRM_1PF00076.222.1e-4312
ENSTSYP00000014305RRM_1PF00076.222.1e-4322
ENSTSYP00000010928RRM_1PF00076.222.2e-4312
ENSTSYP00000010928RRM_1PF00076.222.2e-4322
ENSTSYP00000020549RRM_1PF00076.222.4e-4312
ENSTSYP00000020549RRM_1PF00076.222.4e-4322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTSYT00000011909PUF60-2031593-ENSTSYP00000010928530 (aa)-UPI000B532BDD
ENSTSYT00000036952PUF60-2051566-ENSTSYP00000014305521 (aa)-UPI000C2F679B
ENSTSYT00000037336PUF60-2021695-ENSTSYP00000020549564 (aa)XP_021567358UPI000B529D14
ENSTSYT00000026814PUF60-2011709XM_008056715ENSTSYP00000016854516 (aa)XP_008054906A0A1U7TMD9
ENSTSYT00000040887PUF60-2041674-ENSTSYP00000020164557 (aa)-UPI000C2F586B
Gene Model
Click here to download ENSTSYG00000011912's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000011912's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTSYG00000011912PUF605138.889ENSTSYG00000014755RBM235738.889
ENSTSYG00000011912PUF605235.294ENSTSYG00000007432U2AF26337.255
ENSTSYG00000011912PUF605832.432ENSTSYG00000033066CELF38132.258
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTSYG00000011912PUF6010099.612ENSG00000179950PUF6010099.612Homo_sapiens
ENSTSYG00000011912PUF6010086.372ENSAPOG00000001713puf60b9985.606Acanthochromis_polyacanthus
ENSTSYG00000011912PUF6010097.868ENSAMEG00000006406PUF609996.270Ailuropoda_melanoleuca
ENSTSYG00000011912PUF6010077.351ENSACIG00000003263-9977.778Amphilophus_citrinellus
ENSTSYG00000011912PUF6010085.413ENSACIG00000021705puf60b10085.413Amphilophus_citrinellus
ENSTSYG00000011912PUF6010086.372ENSAOCG00000005395puf60b10086.372Amphiprion_ocellaris
ENSTSYG00000011912PUF6010082.115ENSAOCG00000015558-10081.461Amphiprion_ocellaris
ENSTSYG00000011912PUF6010080.806ENSAPEG00000011923puf60b9981.190Amphiprion_percula
ENSTSYG00000011912PUF6010072.745ENSAPEG00000001836-9975.192Amphiprion_percula
ENSTSYG00000011912PUF6010081.696ENSATEG00000006303-9981.524Anabas_testudineus
ENSTSYG00000011912PUF6010086.180ENSATEG00000001730puf60b9985.606Anabas_testudineus
ENSTSYG00000011912PUF6010098.643ENSAPLG00000010150PUF6010098.659Anas_platyrhynchos
ENSTSYG00000011912PUF6010097.110ENSACAG00000001645PUF609896.402Anolis_carolinensis
ENSTSYG00000011912PUF6010099.612ENSANAG00000018626PUF6010099.612Aotus_nancymaae
ENSTSYG00000011912PUF6010085.413ENSACLG00000004462puf60b10085.413Astatotilapia_calliptera
ENSTSYG00000011912PUF6010076.449ENSAMXG00000041030puf60b10074.719Astyanax_mexicanus
ENSTSYG00000011912PUF6010084.934ENSAMXG00000036570puf60a10081.455Astyanax_mexicanus
ENSTSYG00000011912PUF6010099.612ENSBTAG00000037493PUF6010099.434Bos_taurus
ENSTSYG00000011912PUF608250.162WBGene00004389rnp-68951.266Caenorhabditis_elegans
ENSTSYG00000011912PUF6010099.806ENSCJAG00000021485PUF6010099.623Callithrix_jacchus
ENSTSYG00000011912PUF6010099.612ENSCAFG00000001400PUF6010096.809Canis_familiaris
ENSTSYG00000011912PUF60100100.000ENSCAFG00020018754PUF6010099.811Canis_lupus_dingo
ENSTSYG00000011912PUF6010099.612ENSCHIG00000001618PUF609298.381Capra_hircus
ENSTSYG00000011912PUF6010094.038ENSCPOG00000014613PUF609992.705Cavia_porcellus
ENSTSYG00000011912PUF6010099.612ENSCCAG00000007744PUF6010099.434Cebus_capucinus
ENSTSYG00000011912PUF6010099.612ENSCATG00000035405PUF6010099.434Cercocebus_atys
ENSTSYG00000011912PUF6010099.806ENSCLAG00000009154PUF6010099.468Chinchilla_lanigera
ENSTSYG00000011912PUF6010099.612ENSCSAG00000008878PUF6010099.612Chlorocebus_sabaeus
ENSTSYG00000011912PUF6010098.643ENSCPBG00000005595PUF609998.295Chrysemys_picta_bellii
ENSTSYG00000011912PUF606459.882ENSCING00000002156-8761.145Ciona_intestinalis
ENSTSYG00000011912PUF609949.251ENSCING00000008436-10048.155Ciona_intestinalis
ENSTSYG00000011912PUF609749.605ENSCSAVG00000004765-9749.497Ciona_savignyi
ENSTSYG00000011912PUF609854.857ENSCSAVG00000001385-9955.192Ciona_savignyi
ENSTSYG00000011912PUF608199.520ENSCANG00000041843PUF6010099.520Colobus_angolensis_palliatus
ENSTSYG00000011912PUF6010099.225ENSCGRG00001017442Puf6010098.759Cricetulus_griseus_chok1gshd
ENSTSYG00000011912PUF6010099.225ENSCGRG00000003717Puf609997.662Cricetulus_griseus_crigri
ENSTSYG00000011912PUF6010085.413ENSCSEG00000019887puf60b9384.820Cynoglossus_semilaevis
ENSTSYG00000011912PUF6010072.467ENSCSEG00000014845-8975.775Cynoglossus_semilaevis
ENSTSYG00000011912PUF6010084.645ENSCVAG00000009386puf60b10085.797Cyprinodon_variegatus
ENSTSYG00000011912PUF609180.000ENSCVAG00000001560-9879.747Cyprinodon_variegatus
ENSTSYG00000011912PUF6010086.932ENSDARG00000032175puf60a9994.043Danio_rerio
ENSTSYG00000011912PUF6010078.947ENSDARG00000001241puf60b9996.032Danio_rerio
ENSTSYG00000011912PUF609884.221ENSDNOG00000043278PUF609881.071Dasypus_novemcinctus
ENSTSYG00000011912PUF6010099.612ENSDORG00000004585Puf6010098.561Dipodomys_ordii
ENSTSYG00000011912PUF609748.969FBgn0028577hfp9946.751Drosophila_melanogaster
ENSTSYG00000011912PUF6010061.017ENSEBUG00000014291puf60b8564.786Eptatretus_burgeri
ENSTSYG00000011912PUF609870.040ENSEBUG00000005470-8870.766Eptatretus_burgeri
ENSTSYG00000011912PUF60100100.000ENSEASG00005009695PUF6010099.811Equus_asinus_asinus
ENSTSYG00000011912PUF60100100.000ENSECAG00000024681PUF609999.281Equus_caballus
ENSTSYG00000011912PUF6010085.878ENSELUG00000018443-10084.758Esox_lucius
ENSTSYG00000011912PUF6010084.231ENSELUG00000006507puf60b10079.464Esox_lucius
ENSTSYG00000011912PUF6010099.612ENSFCAG00000001045PUF6010099.612Felis_catus
ENSTSYG00000011912PUF6010085.853ENSFALG00000001136PUF609987.238Ficedula_albicollis
ENSTSYG00000011912PUF6010099.612ENSFDAG00000017177PUF6010099.468Fukomys_damarensis
ENSTSYG00000011912PUF6010085.029ENSFHEG00000020046puf60b10086.180Fundulus_heteroclitus
ENSTSYG00000011912PUF609679.317ENSFHEG00000021687PUF6010080.164Fundulus_heteroclitus
ENSTSYG00000011912PUF6010072.053ENSGMOG00000006392puf60b10070.865Gadus_morhua
ENSTSYG00000011912PUF606798.547ENSGALG00000039901PUF609498.547Gallus_gallus
ENSTSYG00000011912PUF6010079.537ENSGAFG00000004334-9978.958Gambusia_affinis
ENSTSYG00000011912PUF6010084.453ENSGAFG00000021040puf60b10085.605Gambusia_affinis
ENSTSYG00000011912PUF6010070.793ENSGACG00000001484-10069.423Gasterosteus_aculeatus
ENSTSYG00000011912PUF6010073.996ENSGACG00000004717puf60b10072.897Gasterosteus_aculeatus
ENSTSYG00000011912PUF6010098.643ENSGAGG00000013289PUF609398.295Gopherus_agassizii
ENSTSYG00000011912PUF6010099.612ENSGGOG00000004646PUF6010099.434Gorilla_gorilla
ENSTSYG00000011912PUF6010085.413ENSHBUG00000015118puf60b10085.413Haplochromis_burtoni
ENSTSYG00000011912PUF6010082.534ENSHBUG00000009634-10081.128Haplochromis_burtoni
ENSTSYG00000011912PUF6010099.612ENSHGLG00000006111PUF6010099.468Heterocephalus_glaber_female
ENSTSYG00000011912PUF6010099.612ENSHGLG00100012362PUF6010099.468Heterocephalus_glaber_male
ENSTSYG00000011912PUF609866.798ENSHCOG00000000378-9965.038Hippocampus_comes
ENSTSYG00000011912PUF6010082.440ENSHCOG00000015541puf60b10081.734Hippocampus_comes
ENSTSYG00000011912PUF6010082.420ENSIPUG00000002453puf60a9982.798Ictalurus_punctatus
ENSTSYG00000011912PUF6010078.759ENSIPUG00000004660puf60b9978.531Ictalurus_punctatus
ENSTSYG00000011912PUF6010099.806ENSSTOG00000025037PUF6010098.582Ictidomys_tridecemlineatus
ENSTSYG00000011912PUF6010099.419ENSJJAG00000001076Puf6010098.759Jaculus_jaculus
ENSTSYG00000011912PUF6010085.029ENSKMAG00000016745puf60b10086.180Kryptolebias_marmoratus
ENSTSYG00000011912PUF6010078.450ENSKMAG00000010106-10075.933Kryptolebias_marmoratus
ENSTSYG00000011912PUF6010083.493ENSLBEG00000012505puf60b10083.493Labrus_bergylta
ENSTSYG00000011912PUF607090.959ENSLACG00000005456PUF609990.685Latimeria_chalumnae
ENSTSYG00000011912PUF6010091.329ENSLOCG00000010106puf60b10088.931Lepisosteus_oculatus
ENSTSYG00000011912PUF6010098.450ENSLAFG00000022929PUF6010095.560Loxodonta_africana
ENSTSYG00000011912PUF6010099.612ENSMFAG00000043373PUF6010099.434Macaca_fascicularis
ENSTSYG00000011912PUF6010099.612ENSMMUG00000013558PUF6010099.434Macaca_mulatta
ENSTSYG00000011912PUF6010099.612ENSMNEG00000031099PUF6010099.434Macaca_nemestrina
ENSTSYG00000011912PUF6010099.612ENSMLEG00000040009PUF6010099.612Mandrillus_leucophaeus
ENSTSYG00000011912PUF6010083.301ENSMAMG00000019476-9982.163Mastacembelus_armatus
ENSTSYG00000011912PUF6010085.988ENSMAMG00000010394puf60b10083.738Mastacembelus_armatus
ENSTSYG00000011912PUF6010082.726ENSMZEG00005019425-9981.973Maylandia_zebra
ENSTSYG00000011912PUF6010085.413ENSMZEG00005018515puf60b10085.413Maylandia_zebra
ENSTSYG00000011912PUF6010098.643ENSMGAG00000013070PUF609998.286Meleagris_gallopavo
ENSTSYG00000011912PUF607298.775ENSMAUG00000014267-10098.775Mesocricetus_auratus
ENSTSYG00000011912PUF6010076.822ENSMAUG00000018549-10077.196Mesocricetus_auratus
ENSTSYG00000011912PUF60100100.000ENSMICG00000012226PUF6010099.811Microcebus_murinus
ENSTSYG00000011912PUF6010099.419ENSMOCG00000018780Puf6010098.936Microtus_ochrogaster
ENSTSYG00000011912PUF6010073.501ENSMMOG00000018059-9976.712Mola_mola
ENSTSYG00000011912PUF6010085.797ENSMMOG00000004217puf60b10085.797Mola_mola
ENSTSYG00000011912PUF6010099.225ENSMODG00000009161PUF6010096.454Monodelphis_domestica
ENSTSYG00000011912PUF6010078.503ENSMALG00000006797puf60b9978.030Monopterus_albus
ENSTSYG00000011912PUF6010081.382ENSMALG00000000200-9979.245Monopterus_albus
ENSTSYG00000011912PUF6010099.225MGP_CAROLIEiJ_G0019910Puf6010099.113Mus_caroli
ENSTSYG00000011912PUF6010099.225ENSMUSG00000002524Puf6010099.113Mus_musculus
ENSTSYG00000011912PUF6010099.225MGP_PahariEiJ_G0019920Puf6010099.113Mus_pahari
ENSTSYG00000011912PUF6010099.225MGP_SPRETEiJ_G0020812Puf6010099.113Mus_spretus
ENSTSYG00000011912PUF6010099.612ENSMPUG00000008137PUF609798.201Mustela_putorius_furo
ENSTSYG00000011912PUF6010098.837ENSMLUG00000000238-9897.662Myotis_lucifugus
ENSTSYG00000011912PUF6010092.248ENSMLUG00000013032-9993.050Myotis_lucifugus
ENSTSYG00000011912PUF6010099.419ENSNGAG00000000712Puf6010099.419Nannospalax_galili
ENSTSYG00000011912PUF608382.805ENSNBRG00000013047puf60b9784.235Neolamprologus_brichardi
ENSTSYG00000011912PUF6010082.917ENSNBRG00000017223-9982.129Neolamprologus_brichardi
ENSTSYG00000011912PUF6010099.612ENSNLEG00000002156PUF6010098.582Nomascus_leucogenys
ENSTSYG00000011912PUF607599.659ENSOPRG00000002147PUF607599.659Ochotona_princeps
ENSTSYG00000011912PUF609874.162ENSODEG00000015513-9971.375Octodon_degus
ENSTSYG00000011912PUF6074100.000ENSODEG00000014024-100100.000Octodon_degus
ENSTSYG00000011912PUF6010082.917ENSONIG00000014030-9982.197Oreochromis_niloticus
ENSTSYG00000011912PUF6010085.413ENSONIG00000006247puf60b9984.848Oreochromis_niloticus
ENSTSYG00000011912PUF609778.416ENSOANG00000006962PUF609978.405Ornithorhynchus_anatinus
ENSTSYG00000011912PUF609978.788ENSORLG00000028655-9978.897Oryzias_latipes
ENSTSYG00000011912PUF6010085.413ENSORLG00000012279puf60b10085.029Oryzias_latipes
ENSTSYG00000011912PUF6010085.413ENSORLG00020007333puf6010085.029Oryzias_latipes_hni
ENSTSYG00000011912PUF609979.389ENSORLG00020018144-9978.236Oryzias_latipes_hni
ENSTSYG00000011912PUF6010084.512ENSORLG00015007718puf60b10084.895Oryzias_latipes_hsok
ENSTSYG00000011912PUF609979.389ENSORLG00015016833-9978.358Oryzias_latipes_hsok
ENSTSYG00000011912PUF6010083.083ENSOMEG00000001643puf60b9983.232Oryzias_melastigma
ENSTSYG00000011912PUF609980.422ENSOMEG00000022185-9979.135Oryzias_melastigma
ENSTSYG00000011912PUF6010099.806ENSOGAG00000006259PUF609997.691Otolemur_garnettii
ENSTSYG00000011912PUF6010097.093ENSOARG00000016235PUF609996.941Ovis_aries
ENSTSYG00000011912PUF6010099.612ENSPPAG00000029933PUF6010099.434Pan_paniscus
ENSTSYG00000011912PUF6010099.612ENSPPRG00000003257PUF6010099.612Panthera_pardus
ENSTSYG00000011912PUF6010097.287ENSPTIG00000009795PUF609997.876Panthera_tigris_altaica
ENSTSYG00000011912PUF6010099.419ENSPTRG00000020670PUF6010099.245Pan_troglodytes
ENSTSYG00000011912PUF6010099.419ENSPTRG00000043963-9998.861Pan_troglodytes
ENSTSYG00000011912PUF6010099.612ENSPANG00000021936PUF6010099.434Papio_anubis
ENSTSYG00000011912PUF6010086.807ENSPKIG00000004295puf60a9992.647Paramormyrops_kingsleyae
ENSTSYG00000011912PUF6010088.077ENSPKIG00000012204puf60b10088.077Paramormyrops_kingsleyae
ENSTSYG00000011912PUF6010098.450ENSPSIG00000004679PUF609998.470Pelodiscus_sinensis
ENSTSYG00000011912PUF6010084.351ENSPMGG00000013444puf60b9984.351Periophthalmus_magnuspinnatus
ENSTSYG00000011912PUF6010099.419ENSPEMG00000008820Puf6010098.936Peromyscus_maniculatus_bairdii
ENSTSYG00000011912PUF6010099.806ENSPCIG00000020270PUF609999.424Phascolarctos_cinereus
ENSTSYG00000011912PUF6010085.029ENSPFOG00000019217puf60b10083.397Poecilia_formosa
ENSTSYG00000011912PUF6010080.925ENSPFOG00000011118-9980.534Poecilia_formosa
ENSTSYG00000011912PUF6010080.925ENSPLAG00000017025-9279.584Poecilia_latipinna
ENSTSYG00000011912PUF6010085.029ENSPLAG00000010754puf60b10086.180Poecilia_latipinna
ENSTSYG00000011912PUF6010085.029ENSPMEG00000000838puf60b10086.180Poecilia_mexicana
ENSTSYG00000011912PUF6010080.925ENSPMEG00000009767-9279.962Poecilia_mexicana
ENSTSYG00000011912PUF6010082.243ENSPREG00000005440puf60b10082.696Poecilia_reticulata
ENSTSYG00000011912PUF608197.842ENSPPYG00000018951-9597.842Pongo_abelii
ENSTSYG00000011912PUF608199.760ENSPCAG00000014837PUF6010099.760Procavia_capensis
ENSTSYG00000011912PUF6010099.806ENSPCOG00000027981PUF6010099.623Propithecus_coquereli
ENSTSYG00000011912PUF60100100.000ENSPVAG00000016167PUF6081100.000Pteropus_vampyrus
ENSTSYG00000011912PUF6010085.413ENSPNYG00000002556puf60b10085.413Pundamilia_nyererei
ENSTSYG00000011912PUF6010082.726ENSPNYG00000004273-9981.973Pundamilia_nyererei
ENSTSYG00000011912PUF6010083.365ENSPNAG00000019909puf60a10083.174Pygocentrus_nattereri
ENSTSYG00000011912PUF6010077.927ENSPNAG00000019415puf60b9075.822Pygocentrus_nattereri
ENSTSYG00000011912PUF6010099.225ENSRNOG00000009960Puf6010098.936Rattus_norvegicus
ENSTSYG00000011912PUF6010099.612ENSRBIG00000035274PUF6010099.434Rhinopithecus_bieti
ENSTSYG00000011912PUF6010099.612ENSRROG00000029360PUF6010099.434Rhinopithecus_roxellana
ENSTSYG00000011912PUF6010098.450ENSSBOG00000027089PUF609997.732Saimiri_boliviensis_boliviensis
ENSTSYG00000011912PUF609099.138ENSSHAG00000006668PUF609696.094Sarcophilus_harrisii
ENSTSYG00000011912PUF609686.437ENSSFOG00015019619puf60b9986.437Scleropages_formosus
ENSTSYG00000011912PUF6010082.234ENSSFOG00015019371puf60a9887.324Scleropages_formosus
ENSTSYG00000011912PUF607394.224ENSSMAG00000016381puf60b7294.224Scophthalmus_maximus
ENSTSYG00000011912PUF6010084.398ENSSDUG00000009935puf60b10083.673Seriola_dumerili
ENSTSYG00000011912PUF609981.081ENSSDUG00000007048-9979.962Seriola_dumerili
ENSTSYG00000011912PUF6010080.455ENSSLDG00000007366-9981.453Seriola_lalandi_dorsalis
ENSTSYG00000011912PUF6010086.180ENSSLDG00000024011puf60b10083.925Seriola_lalandi_dorsalis
ENSTSYG00000011912PUF606785.260ENSSPUG00000013518PUF609485.294Sphenodon_punctatus
ENSTSYG00000011912PUF6010082.061ENSSPAG00000020285-10082.634Stegastes_partitus
ENSTSYG00000011912PUF6010083.551ENSSPAG00000012144puf60b10084.112Stegastes_partitus
ENSTSYG00000011912PUF6010099.612ENSSSCG00000038800PUF6010095.849Sus_scrofa
ENSTSYG00000011912PUF6010095.349ENSTGUG00000012797-10095.402Taeniopygia_guttata
ENSTSYG00000011912PUF6010085.029ENSTRUG00000005420puf60b10082.804Takifugu_rubripes
ENSTSYG00000011912PUF6010077.713ENSTRUG00000008843-10078.782Takifugu_rubripes
ENSTSYG00000011912PUF6010078.682ENSTNIG00000003069-10078.011Tetraodon_nigroviridis
ENSTSYG00000011912PUF6010085.029ENSTNIG00000013675puf60b10084.280Tetraodon_nigroviridis
ENSTSYG00000011912PUF606296.284ENSTBEG00000002751-9996.271Tupaia_belangeri
ENSTSYG00000011912PUF608181.503ENSTBEG00000001899-10081.792Tupaia_belangeri
ENSTSYG00000011912PUF6010099.031ENSTTRG00000017088PUF6010099.031Tursiops_truncatus
ENSTSYG00000011912PUF60100100.000ENSUAMG00000024917PUF6010099.811Ursus_americanus
ENSTSYG00000011912PUF6010095.155ENSUMAG00000000272PUF609993.525Ursus_maritimus
ENSTSYG00000011912PUF60100100.000ENSVVUG00000022527PUF60100100.000Vulpes_vulpes
ENSTSYG00000011912PUF6010094.767ENSXETG00000012469puf609994.084Xenopus_tropicalis
ENSTSYG00000011912PUF6010081.766ENSXCOG00000012355puf60b10084.047Xiphophorus_couchianus
ENSTSYG00000011912PUF6010085.029ENSXMAG00000001862puf60b10086.180Xiphophorus_maculatus
ENSTSYG00000011912PUF6010078.571ENSXMAG00000010507-9978.185Xiphophorus_maculatus

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