EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTSYG00000012058 (Gene tree)
Gene ID: 103270354
Gene Symbol: -
Alias: -
Full Name: survival motor neuron protein
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Plus strand
Length: 20719 bases
Position: chrKE944878.1:364963-385681
Accession: 103270354
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000023471	SMN	PF06003.12	1.3e-106	1	1
ENSTSYP00000011045	SMN	PF06003.12	8.8e-92	1	2
ENSTSYP00000011045	SMN	PF06003.12	8.8e-92	2	2
ENSTSYP00000017537	SMN	PF06003.12	9.3e-61	1	2
ENSTSYP00000017537	SMN	PF06003.12	9.3e-61	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000027565	-	1317	XM_008067885	ENSTSYP00000023471	287 (aa)	XP_008066076	A0A1U7UJP8
ENSTSYT00000040719	-	663	-	ENSTSYP00000017537	220 (aa)	-	UPI000C2F6EBB
ENSTSYT00000012039	-	774	-	ENSTSYP00000011045	257 (aa)	-	UPI000C2F7F66

Gene Model

Click here to download ENSTSYG00000012058's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000012058's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000012058	-	96	92.500	ENSG00000205571	SMN2	99	88.889	Homo_sapiens
ENSTSYG00000012058	-	96	92.500	ENSG00000172062	SMN1	99	88.889	Homo_sapiens
ENSTSYG00000012058	-	93	52.727	ENSAPOG00000011324	smn1	94	53.623	Acanthochromis_polyacanthus
ENSTSYG00000012058	-	97	90.323	ENSAMEG00000003316	-	95	89.895	Ailuropoda_melanoleuca
ENSTSYG00000012058	-	89	50.373	ENSACIG00000019772	-	97	51.145	Amphilophus_citrinellus
ENSTSYG00000012058	-	93	52.727	ENSAOCG00000024444	smn1	94	53.623	Amphiprion_ocellaris
ENSTSYG00000012058	-	93	53.091	ENSAPEG00000016504	smn1	94	53.986	Amphiprion_percula
ENSTSYG00000012058	-	90	55.019	ENSATEG00000002182	smn1	79	55.597	Anabas_testudineus
ENSTSYG00000012058	-	71	57.971	ENSAPLG00000010912	-	100	56.522	Anas_platyrhynchos
ENSTSYG00000012058	-	92	73.016	ENSACAG00000010017	-	99	57.338	Anolis_carolinensis
ENSTSYG00000012058	-	99	86.813	ENSANAG00000032133	-	99	85.714	Aotus_nancymaae
ENSTSYG00000012058	-	92	51.515	ENSACLG00000007308	smn1	90	54.044	Astatotilapia_calliptera
ENSTSYG00000012058	-	55	58.451	ENSAMXG00000013884	smn1	97	50.523	Astyanax_mexicanus
ENSTSYG00000012058	-	96	86.331	ENSBTAG00000005743	SMN2	99	85.017	Bos_taurus
ENSTSYG00000012058	-	96	92.500	ENSCJAG00000016290	-	99	88.077	Callithrix_jacchus
ENSTSYG00000012058	-	96	89.531	ENSCAFG00000007812	SMN	99	88.502	Canis_familiaris
ENSTSYG00000012058	-	96	89.531	ENSCAFG00020019229	-	93	88.502	Canis_lupus_dingo
ENSTSYG00000012058	-	96	85.714	ENSCHIG00000015559	-	99	83.390	Capra_hircus
ENSTSYG00000012058	-	77	69.027	ENSCAPG00000011021	-	96	69.585	Cavia_aperea
ENSTSYG00000012058	-	99	81.100	ENSCPOG00000036973	-	99	80.412	Cavia_porcellus
ENSTSYG00000012058	-	98	81.379	ENSCPOG00000012328	-	98	80.690	Cavia_porcellus
ENSTSYG00000012058	-	96	92.500	ENSCCAG00000018127	-	99	88.462	Cebus_capucinus
ENSTSYG00000012058	-	96	93.750	ENSCATG00000037002	-	99	89.231	Cercocebus_atys
ENSTSYG00000012058	-	99	80.597	ENSCLAG00000000284	-	99	79.623	Chinchilla_lanigera
ENSTSYG00000012058	-	96	93.750	ENSCSAG00000015688	-	99	88.356	Chlorocebus_sabaeus
ENSTSYG00000012058	-	83	87.500	ENSCHOG00000007346	-	100	76.587	Choloepus_hoffmanni
ENSTSYG00000012058	-	98	63.953	ENSCPBG00000010968	-	99	62.313	Chrysemys_picta_bellii
ENSTSYG00000012058	-	87	30.120	ENSCSAVG00000008390	-	92	30.556	Ciona_savignyi
ENSTSYG00000012058	-	96	95.000	ENSCANG00000038242	-	100	89.130	Colobus_angolensis_palliatus
ENSTSYG00000012058	-	99	80.077	ENSCANG00000033324	-	99	78.462	Colobus_angolensis_palliatus
ENSTSYG00000012058	-	99	65.625	ENSCGRG00001016998	-	99	66.319	Cricetulus_griseus_chok1gshd
ENSTSYG00000012058	-	100	84.828	ENSCGRG00001017959	-	99	85.121	Cricetulus_griseus_chok1gshd
ENSTSYG00000012058	-	100	84.828	ENSCGRG00000007698	Smn1	99	85.121	Cricetulus_griseus_crigri
ENSTSYG00000012058	-	93	46.237	ENSCSEG00000015227	smn1	97	49.645	Cynoglossus_semilaevis
ENSTSYG00000012058	-	94	52.878	ENSCVAG00000007498	smn1	94	52.788	Cyprinodon_variegatus
ENSTSYG00000012058	-	96	52.500	ENSDARG00000018494	smn1	97	53.214	Danio_rerio
ENSTSYG00000012058	-	80	72.683	ENSDNOG00000045949	-	96	73.451	Dasypus_novemcinctus
ENSTSYG00000012058	-	83	88.703	ENSDNOG00000007283	-	99	88.703	Dasypus_novemcinctus
ENSTSYG00000012058	-	99	84.173	ENSDORG00000007082	Smn1	99	77.855	Dipodomys_ordii
ENSTSYG00000012058	-	80	72.464	ENSETEG00000001406	-	93	71.354	Echinops_telfairi
ENSTSYG00000012058	-	95	39.465	ENSEBUG00000011902	smn1	96	37.676	Eptatretus_burgeri
ENSTSYG00000012058	-	95	76.895	ENSEASG00005018000	-	98	76.895	Equus_asinus_asinus
ENSTSYG00000012058	-	95	91.026	ENSECAG00000015215	-	99	86.505	Equus_caballus
ENSTSYG00000012058	-	83	89.062	ENSEEUG00000015777	-	100	80.400	Erinaceus_europaeus
ENSTSYG00000012058	-	73	91.892	ENSELUG00000018067	smn1	94	51.128	Esox_lucius
ENSTSYG00000012058	-	99	90.045	ENSFCAG00000028292	SMN	99	90.045	Felis_catus
ENSTSYG00000012058	-	90	62.357	ENSFALG00000012320	-	94	60.370	Ficedula_albicollis
ENSTSYG00000012058	-	99	80.678	ENSFDAG00000017683	-	99	81.695	Fukomys_damarensis
ENSTSYG00000012058	-	69	56.111	ENSFHEG00000018508	smn1	96	52.381	Fundulus_heteroclitus
ENSTSYG00000012058	-	94	52.439	ENSGMOG00000017279	smn1	95	47.636	Gadus_morhua
ENSTSYG00000012058	-	93	61.111	ENSGALG00000002430	SMN	95	60.370	Gallus_gallus
ENSTSYG00000012058	-	92	55.785	ENSGAFG00000009501	smn1	93	56.017	Gambusia_affinis
ENSTSYG00000012058	-	93	54.682	ENSGACG00000010584	smn1	91	52.490	Gasterosteus_aculeatus
ENSTSYG00000012058	-	95	35.789	ENSGAGG00000013639	-	95	34.946	Gopherus_agassizii
ENSTSYG00000012058	-	98	63.953	ENSGAGG00000011374	-	99	60.764	Gopherus_agassizii
ENSTSYG00000012058	-	97	75.502	ENSGGOG00000026704	-	91	86.598	Gorilla_gorilla
ENSTSYG00000012058	-	94	92.500	ENSGGOG00000003872	-	100	88.618	Gorilla_gorilla
ENSTSYG00000012058	-	93	52.434	ENSHBUG00000013987	smn1	94	55.056	Haplochromis_burtoni
ENSTSYG00000012058	-	99	80.678	ENSHGLG00000001018	-	99	80.678	Heterocephalus_glaber_female
ENSTSYG00000012058	-	99	80.634	ENSHGLG00000001905	-	99	80.634	Heterocephalus_glaber_female
ENSTSYG00000012058	-	99	80.678	ENSHGLG00100011252	-	99	80.678	Heterocephalus_glaber_male
ENSTSYG00000012058	-	96	80.357	ENSHGLG00100018676	-	100	80.657	Heterocephalus_glaber_male
ENSTSYG00000012058	-	95	49.470	ENSHCOG00000017136	smn1	92	49.091	Hippocampus_comes
ENSTSYG00000012058	-	78	76.000	ENSIPUG00000012580	smn1	85	50.735	Ictalurus_punctatus
ENSTSYG00000012058	-	92	89.394	ENSSTOG00000012288	-	100	87.726	Ictidomys_tridecemlineatus
ENSTSYG00000012058	-	67	61.494	ENSJJAG00000014853	-	89	65.143	Jaculus_jaculus
ENSTSYG00000012058	-	93	52.431	ENSKMAG00000007239	smn1	96	52.672	Kryptolebias_marmoratus
ENSTSYG00000012058	-	93	53.047	ENSLBEG00000022550	smn1	94	54.015	Labrus_bergylta
ENSTSYG00000012058	-	93	35.088	ENSLACG00000009808	-	94	37.966	Latimeria_chalumnae
ENSTSYG00000012058	-	95	54.150	ENSLOCG00000011339	smn1	93	55.328	Lepisosteus_oculatus
ENSTSYG00000012058	-	99	90.909	ENSLAFG00000003425	-	100	84.507	Loxodonta_africana
ENSTSYG00000012058	-	96	91.250	ENSMFAG00000008812	-	99	84.589	Macaca_fascicularis
ENSTSYG00000012058	-	96	95.000	ENSMFAG00000031523	SMN1	99	90.110	Macaca_fascicularis
ENSTSYG00000012058	-	96	88.750	ENSMMUG00000030594	-	99	83.904	Macaca_mulatta
ENSTSYG00000012058	-	96	95.000	ENSMMUG00000020214	SMN1	99	90.110	Macaca_mulatta
ENSTSYG00000012058	-	76	76.471	ENSMNEG00000036423	-	86	76.471	Macaca_nemestrina
ENSTSYG00000012058	-	96	95.000	ENSMNEG00000035094	-	99	90.110	Macaca_nemestrina
ENSTSYG00000012058	-	95	93.506	ENSMLEG00000041902	-	99	88.803	Mandrillus_leucophaeus
ENSTSYG00000012058	-	93	52.518	ENSMAMG00000011034	smn1	94	52.899	Mastacembelus_armatus
ENSTSYG00000012058	-	93	52.060	ENSMZEG00005013634	smn1	94	54.182	Maylandia_zebra
ENSTSYG00000012058	-	68	56.853	ENSMGAG00000008889	-	95	55.838	Meleagris_gallopavo
ENSTSYG00000012058	-	99	83.391	ENSMAUG00000010262	Smn1	99	83.391	Mesocricetus_auratus
ENSTSYG00000012058	-	95	93.506	ENSMICG00000034708	-	99	86.667	Microcebus_murinus
ENSTSYG00000012058	-	99	82.699	ENSMOCG00000017833	Smn1	99	82.699	Microtus_ochrogaster
ENSTSYG00000012058	-	89	52.734	ENSMMOG00000005504	smn1	93	52.590	Mola_mola
ENSTSYG00000012058	-	99	68.421	ENSMODG00000001436	-	98	69.550	Monodelphis_domestica
ENSTSYG00000012058	-	93	50.360	ENSMALG00000008025	smn1	94	51.471	Monopterus_albus
ENSTSYG00000012058	-	99	82.699	MGP_CAROLIEiJ_G0018836	Smn1	99	83.045	Mus_caroli
ENSTSYG00000012058	-	99	82.699	ENSMUSG00000021645	Smn1	99	83.045	Mus_musculus
ENSTSYG00000012058	-	99	80.836	MGP_PahariEiJ_G0015911	Smn1	99	80.836	Mus_pahari
ENSTSYG00000012058	-	99	82.699	MGP_SPRETEiJ_G0019718	Smn1	99	83.045	Mus_spretus
ENSTSYG00000012058	-	95	90.909	ENSMPUG00000014470	-	98	90.909	Mustela_putorius_furo
ENSTSYG00000012058	-	96	91.250	ENSMLUG00000010603	-	95	87.205	Myotis_lucifugus
ENSTSYG00000012058	-	99	85.227	ENSNGAG00000019833	Smn1	99	84.722	Nannospalax_galili
ENSTSYG00000012058	-	93	51.852	ENSNBRG00000023000	smn1	94	55.273	Neolamprologus_brichardi
ENSTSYG00000012058	-	99	89.615	ENSNLEG00000004454	-	99	89.615	Nomascus_leucogenys
ENSTSYG00000012058	-	78	62.832	ENSMEUG00000011393	-	99	64.317	Notamacropus_eugenii
ENSTSYG00000012058	-	83	89.062	ENSOPRG00000002015	-	100	82.213	Ochotona_princeps
ENSTSYG00000012058	-	95	82.545	ENSODEG00000015976	-	97	82.545	Octodon_degus
ENSTSYG00000012058	-	93	51.471	ENSONIG00000011799	smn1	95	54.874	Oreochromis_niloticus
ENSTSYG00000012058	-	80	89.130	ENSOANG00000001626	-	95	65.683	Ornithorhynchus_anatinus
ENSTSYG00000012058	-	100	83.673	ENSOCUG00000025183	-	99	78.840	Oryctolagus_cuniculus
ENSTSYG00000012058	-	99	87.640	ENSOCUG00000017097	-	99	85.764	Oryctolagus_cuniculus
ENSTSYG00000012058	-	93	89.231	ENSOCUG00000026649	-	98	83.162	Oryctolagus_cuniculus
ENSTSYG00000012058	-	93	51.812	ENSORLG00000010552	smn1	94	52.768	Oryzias_latipes
ENSTSYG00000012058	-	93	53.933	ENSORLG00020007936	smn1	93	55.285	Oryzias_latipes_hni
ENSTSYG00000012058	-	61	61.392	ENSORLG00015022425	smn1	94	53.137	Oryzias_latipes_hsok
ENSTSYG00000012058	-	59	62.914	ENSOMEG00000007824	smn1	94	52.574	Oryzias_melastigma
ENSTSYG00000012058	-	89	83.206	ENSOGAG00000031414	-	100	77.431	Otolemur_garnettii
ENSTSYG00000012058	-	94	83.883	ENSOARG00000005425	-	99	83.883	Ovis_aries
ENSTSYG00000012058	-	96	92.500	ENSPPAG00000036640	-	99	88.889	Pan_paniscus
ENSTSYG00000012058	-	99	90.498	ENSPPRG00000005575	-	99	90.498	Panthera_pardus
ENSTSYG00000012058	-	99	90.090	ENSPTIG00000007745	-	99	90.090	Panthera_tigris_altaica
ENSTSYG00000012058	-	96	92.500	ENSPTRG00000016955	-	99	88.846	Pan_troglodytes
ENSTSYG00000012058	-	99	90.110	ENSPANG00000013601	-	99	90.110	Papio_anubis
ENSTSYG00000012058	-	96	92.500	ENSPANG00000000253	-	98	84.375	Papio_anubis
ENSTSYG00000012058	-	72	91.892	ENSPKIG00000011096	smn1	94	53.008	Paramormyrops_kingsleyae
ENSTSYG00000012058	-	94	60.071	ENSPSIG00000014787	-	90	58.657	Pelodiscus_sinensis
ENSTSYG00000012058	-	93	49.281	ENSPMGG00000012285	smn1	94	51.373	Periophthalmus_magnuspinnatus
ENSTSYG00000012058	-	90	41.481	ENSPMAG00000005004	smn1	95	41.034	Petromyzon_marinus
ENSTSYG00000012058	-	90	82.540	ENSPCIG00000025764	-	99	69.097	Phascolarctos_cinereus
ENSTSYG00000012058	-	93	54.212	ENSPFOG00000007786	smn1	94	53.480	Poecilia_formosa
ENSTSYG00000012058	-	92	57.438	ENSPLAG00000012071	smn1	93	57.676	Poecilia_latipinna
ENSTSYG00000012058	-	92	57.025	ENSPMEG00000017085	smn1	93	57.261	Poecilia_mexicana
ENSTSYG00000012058	-	92	57.438	ENSPREG00000005824	smn1	93	57.676	Poecilia_reticulata
ENSTSYG00000012058	-	92	88.764	ENSPPYG00000015533	-	97	88.764	Pongo_abelii
ENSTSYG00000012058	-	85	63.303	ENSPPYG00000019189	-	99	62.385	Pongo_abelii
ENSTSYG00000012058	-	89	89.062	ENSPCAG00000004187	-	99	82.463	Procavia_capensis
ENSTSYG00000012058	-	87	96.610	ENSPCOG00000022307	-	99	77.632	Propithecus_coquereli
ENSTSYG00000012058	-	96	91.336	ENSPVAG00000005977	-	99	89.655	Pteropus_vampyrus
ENSTSYG00000012058	-	93	51.852	ENSPNYG00000014148	smn1	94	55.273	Pundamilia_nyererei
ENSTSYG00000012058	-	93	50.187	ENSPNAG00000014007	smn1	82	49.640	Pygocentrus_nattereri
ENSTSYG00000012058	-	99	79.931	ENSRNOG00000018067	Smn1	99	79.931	Rattus_norvegicus
ENSTSYG00000012058	-	96	95.000	ENSRBIG00000037052	-	99	90.110	Rhinopithecus_bieti
ENSTSYG00000012058	-	94	84.615	ENSRBIG00000036775	-	95	74.820	Rhinopithecus_bieti
ENSTSYG00000012058	-	96	95.000	ENSRROG00000039399	-	99	90.110	Rhinopithecus_roxellana
ENSTSYG00000012058	-	99	84.615	ENSRROG00000031088	-	99	72.794	Rhinopithecus_roxellana
ENSTSYG00000012058	-	96	91.250	ENSSBOG00000011665	-	99	88.077	Saimiri_boliviensis_boliviensis
ENSTSYG00000012058	-	79	89.231	ENSSBOG00000020112	-	87	81.600	Saimiri_boliviensis_boliviensis
ENSTSYG00000012058	-	90	80.000	ENSSHAG00000001499	-	96	69.663	Sarcophilus_harrisii
ENSTSYG00000012058	-	92	53.469	ENSSFOG00015015507	smn1	94	53.469	Scleropages_formosus
ENSTSYG00000012058	-	93	51.103	ENSSMAG00000007922	smn1	94	50.923	Scophthalmus_maximus
ENSTSYG00000012058	-	93	52.899	ENSSDUG00000018533	smn1	94	53.623	Seriola_dumerili
ENSTSYG00000012058	-	93	53.261	ENSSLDG00000021135	smn1	94	53.986	Seriola_lalandi_dorsalis
ENSTSYG00000012058	-	97	61.702	ENSSPUG00000000373	-	99	60.690	Sphenodon_punctatus
ENSTSYG00000012058	-	93	52.899	ENSSPAG00000004345	smn1	94	53.360	Stegastes_partitus
ENSTSYG00000012058	-	73	58.768	ENSSSCG00000033865	-	94	61.137	Sus_scrofa
ENSTSYG00000012058	-	97	90.000	ENSSSCG00000016970	-	99	88.660	Sus_scrofa
ENSTSYG00000012058	-	99	67.059	ENSSSCG00000029127	-	99	66.667	Sus_scrofa
ENSTSYG00000012058	-	94	59.498	ENSTGUG00000001548	-	100	58.273	Taeniopygia_guttata
ENSTSYG00000012058	-	93	48.507	ENSTRUG00000000736	smn	95	49.254	Takifugu_rubripes
ENSTSYG00000012058	-	94	48.571	ENSTNIG00000009892	smn1	95	49.104	Tetraodon_nigroviridis
ENSTSYG00000012058	-	74	86.979	ENSTBEG00000002399	-	93	86.979	Tupaia_belangeri
ENSTSYG00000012058	-	96	86.250	ENSTTRG00000005080	-	99	83.904	Tursiops_truncatus
ENSTSYG00000012058	-	71	89.130	ENSUAMG00000024947	-	70	88.542	Ursus_americanus
ENSTSYG00000012058	-	97	91.039	ENSUMAG00000007842	-	74	90.592	Ursus_maritimus
ENSTSYG00000012058	-	71	100.000	ENSVPAG00000009887	-	100	76.173	Vicugna_pacos
ENSTSYG00000012058	-	96	89.531	ENSVVUG00000006934	-	99	88.502	Vulpes_vulpes
ENSTSYG00000012058	-	86	37.218	ENSXETG00000004912	-	79	60.317	Xenopus_tropicalis
ENSTSYG00000012058	-	93	63.415	ENSXETG00000018189	smn2	96	54.671	Xenopus_tropicalis
ENSTSYG00000012058	-	93	56.148	ENSXMAG00000001521	smn1	95	56.148	Xiphophorus_maculatus