EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000012711 (Gene tree)
Gene ID: 103273018
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Plus strand
Length: 104822 bases
Position: chrKE948055.1:310341-415162
Accession: 103273018
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000017098	Ago_hook	PF10427.9	2.5e-19	1	1
ENSTSYP00000028843	Ago_hook	PF10427.9	2.9e-19	1	1
ENSTSYP00000011662	Ago_hook	PF10427.9	3.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000036841	TNRC6A-203	5796	XM_008070484	ENSTSYP00000028843	1931 (aa)	XP_008068675	UPI000C2F782C
ENSTSYT00000040281	TNRC6A-202	5730	-	ENSTSYP00000017098	1909 (aa)	XP_021574458	UPI000B5359BE
ENSTSYT00000012712	TNRC6A-201	5877	-	ENSTSYP00000011662	1958 (aa)	-	UPI000B531525

Gene Model

Click here to download ENSTSYG00000012711's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000012711's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000012711	TNRC6A	85	43.165	ENSTSYG00000005403	TNRC6C	99	43.471
ENSTSYG00000012711	TNRC6A	97	40.899	ENSTSYG00000011836	TNRC6B	95	45.912

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000012711	TNRC6A	100	96.840	ENSG00000090905	TNRC6A	100	96.840	Homo_sapiens
ENSTSYG00000012711	TNRC6A	99	96.170	ENSAMEG00000009333	TNRC6A	100	96.184	Ailuropoda_melanoleuca
ENSTSYG00000012711	TNRC6A	99	81.837	ENSAPLG00000009978	TNRC6A	100	81.837	Anas_platyrhynchos
ENSTSYG00000012711	TNRC6A	100	54.396	ENSACAG00000011857	TNRC6A	100	56.220	Anolis_carolinensis
ENSTSYG00000012711	TNRC6A	100	96.685	ENSANAG00000025252	TNRC6A	100	96.685	Aotus_nancymaae
ENSTSYG00000012711	TNRC6A	92	56.827	ENSAMXG00000019919	tnrc6a	99	57.484	Astyanax_mexicanus
ENSTSYG00000012711	TNRC6A	100	95.285	ENSBTAG00000017999	TNRC6A	100	94.919	Bos_taurus
ENSTSYG00000012711	TNRC6A	100	96.392	ENSCJAG00000020677	TNRC6A	100	96.392	Callithrix_jacchus
ENSTSYG00000012711	TNRC6A	99	96.272	ENSCAFG00000017531	TNRC6A	100	96.272	Canis_familiaris
ENSTSYG00000012711	TNRC6A	99	95.066	ENSCAFG00020021160	TNRC6A	99	95.013	Canis_lupus_dingo
ENSTSYG00000012711	TNRC6A	100	95.233	ENSCHIG00000019448	TNRC6A	100	95.399	Capra_hircus
ENSTSYG00000012711	TNRC6A	99	95.805	ENSCPOG00000036684	TNRC6A	100	95.805	Cavia_porcellus
ENSTSYG00000012711	TNRC6A	100	96.886	ENSCCAG00000033664	TNRC6A	100	96.886	Cebus_capucinus
ENSTSYG00000012711	TNRC6A	99	96.427	ENSCATG00000019284	TNRC6A	99	96.427	Cercocebus_atys
ENSTSYG00000012711	TNRC6A	100	90.990	ENSCLAG00000010217	TNRC6A	100	90.990	Chinchilla_lanigera
ENSTSYG00000012711	TNRC6A	100	96.888	ENSCSAG00000006561	TNRC6A	100	96.888	Chlorocebus_sabaeus
ENSTSYG00000012711	TNRC6A	95	91.831	ENSCHOG00000009374	TNRC6A	95	91.831	Choloepus_hoffmanni
ENSTSYG00000012711	TNRC6A	90	81.928	ENSCPBG00000001881	TNRC6A	99	81.928	Chrysemys_picta_bellii
ENSTSYG00000012711	TNRC6A	100	96.937	ENSCANG00000041549	TNRC6A	100	96.937	Colobus_angolensis_palliatus
ENSTSYG00000012711	TNRC6A	100	94.398	ENSCGRG00001015021	Tnrc6a	100	94.188	Cricetulus_griseus_chok1gshd
ENSTSYG00000012711	TNRC6A	99	93.501	ENSCGRG00000013351	Tnrc6a	99	93.291	Cricetulus_griseus_crigri
ENSTSYG00000012711	TNRC6A	92	56.311	ENSDARG00000079688	tnrc6a	99	56.790	Danio_rerio
ENSTSYG00000012711	TNRC6A	99	93.871	ENSDNOG00000013989	TNRC6A	99	93.890	Dasypus_novemcinctus
ENSTSYG00000012711	TNRC6A	99	85.714	ENSETEG00000014658	TNRC6A	99	85.759	Echinops_telfairi
ENSTSYG00000012711	TNRC6A	100	96.274	ENSEASG00005017693	TNRC6A	100	96.661	Equus_asinus_asinus
ENSTSYG00000012711	TNRC6A	100	96.274	ENSECAG00000025056	TNRC6A	100	96.661	Equus_caballus
ENSTSYG00000012711	TNRC6A	99	89.209	ENSEEUG00000004530	TNRC6A	99	89.243	Erinaceus_europaeus
ENSTSYG00000012711	TNRC6A	100	94.791	ENSFCAG00000025236	TNRC6A	100	94.740	Felis_catus
ENSTSYG00000012711	TNRC6A	99	79.026	ENSFALG00000003757	TNRC6A	99	79.688	Ficedula_albicollis
ENSTSYG00000012711	TNRC6A	92	80.381	ENSGALG00000006068	TNRC6A	99	82.767	Gallus_gallus
ENSTSYG00000012711	TNRC6A	90	81.369	ENSGAGG00000023209	TNRC6A	99	81.656	Gopherus_agassizii
ENSTSYG00000012711	TNRC6A	99	96.710	ENSGGOG00000005137	TNRC6A	99	96.710	Gorilla_gorilla
ENSTSYG00000012711	TNRC6A	99	93.852	ENSHGLG00000012474	-	100	93.799	Heterocephalus_glaber_female
ENSTSYG00000012711	TNRC6A	94	74.818	ENSHGLG00000007368	-	93	74.706	Heterocephalus_glaber_female
ENSTSYG00000012711	TNRC6A	99	93.274	ENSHGLG00100012496	-	100	93.221	Heterocephalus_glaber_male
ENSTSYG00000012711	TNRC6A	99	96.130	ENSSTOG00000023394	TNRC6A	99	96.130	Ictidomys_tridecemlineatus
ENSTSYG00000012711	TNRC6A	99	69.370	ENSLACG00000006277	TNRC6A	100	70.093	Latimeria_chalumnae
ENSTSYG00000012711	TNRC6A	99	83.002	ENSLOCG00000005517	tnrc6a	93	83.002	Lepisosteus_oculatus
ENSTSYG00000012711	TNRC6A	98	94.632	ENSLAFG00000004209	TNRC6A	99	94.683	Loxodonta_africana
ENSTSYG00000012711	TNRC6A	99	95.046	ENSMFAG00000003824	TNRC6A	99	95.161	Macaca_fascicularis
ENSTSYG00000012711	TNRC6A	100	96.731	ENSMMUG00000020428	TNRC6A	100	96.731	Macaca_mulatta
ENSTSYG00000012711	TNRC6A	100	96.596	ENSMNEG00000034854	TNRC6A	100	96.596	Macaca_nemestrina
ENSTSYG00000012711	TNRC6A	99	94.865	ENSMLEG00000042737	TNRC6A	97	94.551	Mandrillus_leucophaeus
ENSTSYG00000012711	TNRC6A	99	79.146	ENSMGAG00000006455	TNRC6A	99	80.233	Meleagris_gallopavo
ENSTSYG00000012711	TNRC6A	100	94.241	ENSMAUG00000012750	Tnrc6a	100	94.084	Mesocricetus_auratus
ENSTSYG00000012711	TNRC6A	100	97.604	ENSMICG00000030685	TNRC6A	100	97.604	Microcebus_murinus
ENSTSYG00000012711	TNRC6A	100	94.552	ENSMOCG00000000152	Tnrc6a	100	94.290	Microtus_ochrogaster
ENSTSYG00000012711	TNRC6A	99	81.548	ENSMODG00000016348	TNRC6A	99	81.470	Monodelphis_domestica
ENSTSYG00000012711	TNRC6A	99	92.918	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	94.353	Mus_caroli
ENSTSYG00000012711	TNRC6A	100	93.609	ENSMUSG00000052707	Tnrc6a	99	94.782	Mus_musculus
ENSTSYG00000012711	TNRC6A	99	93.925	MGP_PahariEiJ_G0013635	Tnrc6a	100	95.282	Mus_pahari
ENSTSYG00000012711	TNRC6A	100	93.667	MGP_SPRETEiJ_G0031539	Tnrc6a	100	94.782	Mus_spretus
ENSTSYG00000012711	TNRC6A	97	83.925	ENSMPUG00000012324	TNRC6A	100	83.763	Mustela_putorius_furo
ENSTSYG00000012711	TNRC6A	99	92.962	ENSMLUG00000002701	TNRC6A	100	92.962	Myotis_lucifugus
ENSTSYG00000012711	TNRC6A	99	95.650	ENSNGAG00000020702	Tnrc6a	100	95.597	Nannospalax_galili
ENSTSYG00000012711	TNRC6A	99	93.831	ENSNLEG00000011851	TNRC6A	98	94.726	Nomascus_leucogenys
ENSTSYG00000012711	TNRC6A	77	89.258	ENSMEUG00000015959	-	77	89.258	Notamacropus_eugenii
ENSTSYG00000012711	TNRC6A	96	99.254	ENSOPRG00000005819	TNRC6A	96	99.254	Ochotona_princeps
ENSTSYG00000012711	TNRC6A	99	89.271	ENSODEG00000012802	TNRC6A	99	89.376	Octodon_degus
ENSTSYG00000012711	TNRC6A	89	82.851	ENSOANG00000007672	TNRC6A	99	82.847	Ornithorhynchus_anatinus
ENSTSYG00000012711	TNRC6A	99	93.386	ENSOCUG00000004325	TNRC6A	100	93.386	Oryctolagus_cuniculus
ENSTSYG00000012711	TNRC6A	99	97.015	ENSOGAG00000006666	TNRC6A	100	97.015	Otolemur_garnettii
ENSTSYG00000012711	TNRC6A	99	94.507	ENSOARG00000017950	TNRC6A	100	94.148	Ovis_aries
ENSTSYG00000012711	TNRC6A	99	96.590	ENSPPAG00000028379	TNRC6A	100	96.590	Pan_paniscus
ENSTSYG00000012711	TNRC6A	100	94.791	ENSPPRG00000005861	TNRC6A	100	94.740	Panthera_pardus
ENSTSYG00000012711	TNRC6A	99	93.779	ENSPTIG00000006346	TNRC6A	99	93.779	Panthera_tigris_altaica
ENSTSYG00000012711	TNRC6A	99	96.552	ENSPTRG00000007898	TNRC6A	99	96.552	Pan_troglodytes
ENSTSYG00000012711	TNRC6A	100	94.504	ENSPANG00000018523	TNRC6A	100	94.504	Papio_anubis
ENSTSYG00000012711	TNRC6A	89	75.862	ENSPKIG00000012859	tnrc6a	96	78.146	Paramormyrops_kingsleyae
ENSTSYG00000012711	TNRC6A	77	77.703	ENSPSIG00000003965	TNRC6A	100	77.703	Pelodiscus_sinensis
ENSTSYG00000012711	TNRC6A	100	93.976	ENSPEMG00000016318	Tnrc6a	100	94.179	Peromyscus_maniculatus_bairdii
ENSTSYG00000012711	TNRC6A	99	83.246	ENSPCIG00000012106	TNRC6A	100	83.255	Phascolarctos_cinereus
ENSTSYG00000012711	TNRC6A	99	96.029	ENSPPYG00000007202	TNRC6A	100	96.029	Pongo_abelii
ENSTSYG00000012711	TNRC6A	95	100.000	ENSPCAG00000008260	TNRC6A	94	100.000	Procavia_capensis
ENSTSYG00000012711	TNRC6A	100	95.309	ENSPCOG00000010134	TNRC6A	100	95.309	Propithecus_coquereli
ENSTSYG00000012711	TNRC6A	89	71.117	ENSPVAG00000012066	TNRC6A	99	70.946	Pteropus_vampyrus
ENSTSYG00000012711	TNRC6A	100	93.479	ENSRNOG00000024737	Tnrc6a	100	93.532	Rattus_norvegicus
ENSTSYG00000012711	TNRC6A	99	96.789	ENSRBIG00000014222	TNRC6A	100	96.789	Rhinopithecus_bieti
ENSTSYG00000012711	TNRC6A	100	96.885	ENSRROG00000032360	TNRC6A	100	96.885	Rhinopithecus_roxellana
ENSTSYG00000012711	TNRC6A	99	95.903	ENSSBOG00000036197	TNRC6A	100	97.425	Saimiri_boliviensis_boliviensis
ENSTSYG00000012711	TNRC6A	90	83.590	ENSSHAG00000008811	TNRC6A	99	84.046	Sarcophilus_harrisii
ENSTSYG00000012711	TNRC6A	88	67.515	ENSSFOG00015008920	tnrc6a	98	78.004	Scleropages_formosus
ENSTSYG00000012711	TNRC6A	73	83.877	ENSSARG00000002479	TNRC6A	89	84.239	Sorex_araneus
ENSTSYG00000012711	TNRC6A	91	78.275	ENSSPUG00000010525	TNRC6A	100	78.275	Sphenodon_punctatus
ENSTSYG00000012711	TNRC6A	100	95.303	ENSSSCG00000038870	TNRC6A	100	97.250	Sus_scrofa
ENSTSYG00000012711	TNRC6A	99	79.416	ENSTGUG00000006142	TNRC6A	100	80.042	Taeniopygia_guttata
ENSTSYG00000012711	TNRC6A	99	94.444	ENSTBEG00000014965	TNRC6A	100	94.465	Tupaia_belangeri
ENSTSYG00000012711	TNRC6A	94	98.274	ENSTTRG00000002008	TNRC6A	93	98.274	Tursiops_truncatus
ENSTSYG00000012711	TNRC6A	79	95.476	ENSUAMG00000006656	-	93	95.476	Ursus_americanus
ENSTSYG00000012711	TNRC6A	100	95.132	ENSUMAG00000008274	TNRC6A	100	97.229	Ursus_maritimus
ENSTSYG00000012711	TNRC6A	57	85.493	ENSVPAG00000010764	-	57	85.493	Vicugna_pacos
ENSTSYG00000012711	TNRC6A	99	96.087	ENSVVUG00000005380	TNRC6A	99	96.087	Vulpes_vulpes
ENSTSYG00000012711	TNRC6A	96	65.171	ENSXETG00000030437	TNRC6A	99	65.822	Xenopus_tropicalis