EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000013234 (Gene tree)
Gene ID: 103275888
Gene Symbol: -
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Plus strand
Length: 98931 bases
Position: chrKE950101.1:23997-122927
Accession: 103275888
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000012148	ResIII	PF04851.15	7.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000048752	-	354	-	ENSTSYP00000026576	117 (aa)	-	UPI000C2F5225
ENSTSYT00000005340	-	1165	XM_008073292	ENSTSYP00000004891	299 (aa)	XP_008071483	A0A1U7URV6
ENSTSYT00000013240	-	2733	XM_008073293	ENSTSYP00000012148	910 (aa)	XP_008071484	A0A1U7UGV7

Gene Model

Click here to download ENSTSYG00000013234's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000013234's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000013234	-	77	41.470	ENSTSYG00000002032	RAD54L	91	41.470
ENSTSYG00000013234	-	59	30.838	ENSTSYG00000003005	CHD1L	87	34.483
ENSTSYG00000013234	-	65	30.795	ENSTSYG00000004240	SMARCA1	54	30.795
ENSTSYG00000013234	-	59	32.546	ENSTSYG00000013871	ERCC6L2	81	32.546
ENSTSYG00000013234	-	55	30.018	ENSTSYG00000005811	-	75	30.018

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000013234	-	99	89.989	ENSG00000197275	RAD54B	99	89.989	Homo_sapiens
ENSTSYG00000013234	-	80	91.310	ENSG00000265817	FSBP	99	91.310	Homo_sapiens
ENSTSYG00000013234	-	100	85.950	ENSAMEG00000005834	-	100	85.950	Ailuropoda_melanoleuca
ENSTSYG00000013234	-	99	55.410	ENSACIG00000013005	rad54b	99	55.410	Amphilophus_citrinellus
ENSTSYG00000013234	-	99	55.154	ENSAOCG00000008523	rad54b	99	55.154	Amphiprion_ocellaris
ENSTSYG00000013234	-	99	55.324	ENSAPEG00000001673	rad54b	99	55.434	Amphiprion_percula
ENSTSYG00000013234	-	99	54.853	ENSATEG00000001527	rad54b	99	54.853	Anabas_testudineus
ENSTSYG00000013234	-	99	68.865	ENSAPLG00000014366	-	99	68.865	Anas_platyrhynchos
ENSTSYG00000013234	-	88	71.214	ENSACAG00000003671	-	99	71.214	Anolis_carolinensis
ENSTSYG00000013234	-	71	88.426	ENSANAG00000019528	-	99	88.426	Aotus_nancymaae
ENSTSYG00000013234	-	99	54.645	ENSACLG00000007826	rad54b	92	59.521	Astatotilapia_calliptera
ENSTSYG00000013234	-	85	58.524	ENSAMXG00000039985	rad54b	94	58.260	Astyanax_mexicanus
ENSTSYG00000013234	-	100	84.286	ENSBTAG00000000632	RAD54B	100	84.286	Bos_taurus
ENSTSYG00000013234	-	78	35.646	WBGene00013792	Y116A8C.13	82	35.559	Caenorhabditis_elegans
ENSTSYG00000013234	-	99	88.352	ENSCJAG00000000080	-	99	89.517	Callithrix_jacchus
ENSTSYG00000013234	-	100	84.083	ENSCAFG00000009179	RAD54B	99	84.083	Canis_familiaris
ENSTSYG00000013234	-	100	83.974	ENSCAFG00020012084	-	99	83.974	Canis_lupus_dingo
ENSTSYG00000013234	-	100	84.066	ENSCHIG00000008230	-	100	84.066	Capra_hircus
ENSTSYG00000013234	-	100	84.066	ENSCPOG00000011643	-	99	84.066	Cavia_porcellus
ENSTSYG00000013234	-	99	88.571	ENSCCAG00000011754	-	99	89.517	Cebus_capucinus
ENSTSYG00000013234	-	99	89.439	ENSCATG00000030661	-	99	90.759	Cercocebus_atys
ENSTSYG00000013234	-	99	84.708	ENSCLAG00000010476	-	99	84.708	Chinchilla_lanigera
ENSTSYG00000013234	-	99	89.329	ENSCSAG00000012712	-	99	89.329	Chlorocebus_sabaeus
ENSTSYG00000013234	-	99	70.338	ENSCPBG00000003204	-	99	70.922	Chrysemys_picta_bellii
ENSTSYG00000013234	-	99	89.659	ENSCANG00000017939	-	99	90.759	Colobus_angolensis_palliatus
ENSTSYG00000013234	-	100	79.825	ENSCGRG00001020184	Rad54b	100	79.825	Cricetulus_griseus_chok1gshd
ENSTSYG00000013234	-	100	78.384	ENSCGRG00000016752	Rad54b	100	78.384	Cricetulus_griseus_crigri
ENSTSYG00000013234	-	86	59.391	ENSCSEG00000001601	rad54b	97	59.391	Cynoglossus_semilaevis
ENSTSYG00000013234	-	99	56.692	ENSCVAG00000009200	rad54b	99	56.692	Cyprinodon_variegatus
ENSTSYG00000013234	-	100	53.383	ENSDARG00000092134	rad54b	100	60.522	Danio_rerio
ENSTSYG00000013234	-	99	84.337	ENSDNOG00000015535	-	99	84.337	Dasypus_novemcinctus
ENSTSYG00000013234	-	100	84.303	ENSDORG00000002492	Rad54b	100	84.303	Dipodomys_ordii
ENSTSYG00000013234	-	87	81.242	ENSETEG00000010605	-	100	81.242	Echinops_telfairi
ENSTSYG00000013234	-	99	47.458	ENSEBUG00000009104	rad54b	98	47.458	Eptatretus_burgeri
ENSTSYG00000013234	-	97	86.395	ENSEASG00005004021	-	99	86.395	Equus_asinus_asinus
ENSTSYG00000013234	-	100	86.608	ENSECAG00000021949	-	99	86.608	Equus_caballus
ENSTSYG00000013234	-	83	85.093	ENSEEUG00000008056	-	83	85.093	Erinaceus_europaeus
ENSTSYG00000013234	-	99	53.545	ENSELUG00000009287	rad54b	99	53.757	Esox_lucius
ENSTSYG00000013234	-	100	85.510	ENSFCAG00000015513	-	100	88.567	Felis_catus
ENSTSYG00000013234	-	99	68.182	ENSFALG00000005467	-	99	68.182	Ficedula_albicollis
ENSTSYG00000013234	-	99	85.369	ENSFDAG00000020541	-	100	85.369	Fukomys_damarensis
ENSTSYG00000013234	-	89	57.401	ENSFHEG00000014382	rad54b	90	57.401	Fundulus_heteroclitus
ENSTSYG00000013234	-	86	56.770	ENSGMOG00000014774	rad54b	98	56.770	Gadus_morhua
ENSTSYG00000013234	-	99	68.078	ENSGALG00000043597	RAD54B	99	68.078	Gallus_gallus
ENSTSYG00000013234	-	99	55.277	ENSGAFG00000007901	rad54b	99	55.277	Gambusia_affinis
ENSTSYG00000013234	-	99	55.128	ENSGACG00000009128	rad54b	99	55.128	Gasterosteus_aculeatus
ENSTSYG00000013234	-	99	70.197	ENSGAGG00000018747	-	99	70.197	Gopherus_agassizii
ENSTSYG00000013234	-	100	89.560	ENSGGOG00000023516	-	100	89.560	Gorilla_gorilla
ENSTSYG00000013234	-	99	54.225	ENSHBUG00000016017	rad54b	99	54.225	Haplochromis_burtoni
ENSTSYG00000013234	-	100	83.642	ENSHGLG00000008263	RAD54B	99	83.642	Heterocephalus_glaber_female
ENSTSYG00000013234	-	100	82.882	ENSHGLG00100008108	-	99	82.882	Heterocephalus_glaber_male
ENSTSYG00000013234	-	99	53.552	ENSHCOG00000004764	rad54b	98	55.665	Hippocampus_comes
ENSTSYG00000013234	-	100	52.220	ENSIPUG00000018531	rad54b	99	52.220	Ictalurus_punctatus
ENSTSYG00000013234	-	99	84.641	ENSSTOG00000010791	-	99	84.641	Ictidomys_tridecemlineatus
ENSTSYG00000013234	-	100	81.998	ENSJJAG00000010314	Rad54b	100	81.998	Jaculus_jaculus
ENSTSYG00000013234	-	86	58.608	ENSKMAG00000004744	rad54b	91	58.608	Kryptolebias_marmoratus
ENSTSYG00000013234	-	82	69.600	ENSLACG00000000859	-	100	69.600	Latimeria_chalumnae
ENSTSYG00000013234	-	100	57.895	ENSLOCG00000010100	rad54b	93	64.475	Lepisosteus_oculatus
ENSTSYG00000013234	-	89	85.520	ENSLAFG00000015315	-	100	85.520	Loxodonta_africana
ENSTSYG00000013234	-	99	89.329	ENSMFAG00000031629	-	99	90.483	Macaca_fascicularis
ENSTSYG00000013234	-	99	89.329	ENSMMUG00000005659	-	99	89.329	Macaca_mulatta
ENSTSYG00000013234	-	99	89.219	ENSMNEG00000016408	-	99	89.219	Macaca_nemestrina
ENSTSYG00000013234	-	99	89.549	ENSMLEG00000006946	-	99	89.549	Mandrillus_leucophaeus
ENSTSYG00000013234	-	99	55.206	ENSMAMG00000012269	rad54b	99	55.206	Mastacembelus_armatus
ENSTSYG00000013234	-	99	54.225	ENSMZEG00005005281	rad54b	95	59.647	Maylandia_zebra
ENSTSYG00000013234	-	99	68.295	ENSMGAG00000012024	-	99	68.295	Meleagris_gallopavo
ENSTSYG00000013234	-	100	78.838	ENSMAUG00000013586	Rad54b	100	78.838	Mesocricetus_auratus
ENSTSYG00000013234	-	99	83.498	ENSMICG00000000754	-	99	83.498	Microcebus_murinus
ENSTSYG00000013234	-	100	78.337	ENSMOCG00000020035	Rad54b	99	78.337	Microtus_ochrogaster
ENSTSYG00000013234	-	99	54.526	ENSMMOG00000003394	rad54b	99	54.526	Mola_mola
ENSTSYG00000013234	-	88	76.625	ENSMODG00000007343	-	99	76.625	Monodelphis_domestica
ENSTSYG00000013234	-	71	59.535	ENSMALG00000001520	rad54b	99	59.535	Monopterus_albus
ENSTSYG00000013234	-	100	79.605	MGP_CAROLIEiJ_G0025810	Rad54b	100	79.605	Mus_caroli
ENSTSYG00000013234	-	100	78.595	ENSMUSG00000078773	Rad54b	100	78.595	Mus_musculus
ENSTSYG00000013234	-	100	79.011	MGP_PahariEiJ_G0023933	Rad54b	100	79.011	Mus_pahari
ENSTSYG00000013234	-	100	79.363	MGP_SPRETEiJ_G0026758	Rad54b	100	79.363	Mus_spretus
ENSTSYG00000013234	-	89	86.173	ENSMPUG00000008878	-	100	86.173	Mustela_putorius_furo
ENSTSYG00000013234	-	99	83.991	ENSMLUG00000008953	-	99	83.991	Myotis_lucifugus
ENSTSYG00000013234	-	100	83.424	ENSNGAG00000017537	Rad54b	100	83.424	Nannospalax_galili
ENSTSYG00000013234	-	99	54.536	ENSNBRG00000013394	rad54b	99	54.536	Neolamprologus_brichardi
ENSTSYG00000013234	-	99	89.989	ENSNLEG00000003062	-	99	91.172	Nomascus_leucogenys
ENSTSYG00000013234	-	82	72.951	ENSMEUG00000012426	-	82	72.951	Notamacropus_eugenii
ENSTSYG00000013234	-	89	79.455	ENSODEG00000002650	-	96	86.000	Octodon_degus
ENSTSYG00000013234	-	100	83.864	ENSODEG00000019564	-	100	83.864	Octodon_degus
ENSTSYG00000013234	-	99	55.423	ENSONIG00000006067	rad54b	99	55.423	Oreochromis_niloticus
ENSTSYG00000013234	-	83	75.830	ENSOANG00000011348	-	100	75.830	Ornithorhynchus_anatinus
ENSTSYG00000013234	-	100	84.632	ENSOCUG00000016478	-	99	84.632	Oryctolagus_cuniculus
ENSTSYG00000013234	-	99	55.085	ENSORLG00000008918	rad54b	99	62.133	Oryzias_latipes
ENSTSYG00000013234	-	71	62.287	ENSORLG00020012171	rad54b	99	62.287	Oryzias_latipes_hni
ENSTSYG00000013234	-	99	54.937	ENSORLG00015018536	rad54b	99	54.937	Oryzias_latipes_hsok
ENSTSYG00000013234	-	84	60.155	ENSOMEG00000004345	rad54b	99	60.155	Oryzias_melastigma
ENSTSYG00000013234	-	99	86.044	ENSOGAG00000007854	-	99	86.044	Otolemur_garnettii
ENSTSYG00000013234	-	89	86.207	ENSOARG00000007691	-	100	86.207	Ovis_aries
ENSTSYG00000013234	-	99	88.229	ENSPPAG00000029572	-	99	88.229	Pan_paniscus
ENSTSYG00000013234	-	100	85.950	ENSPPRG00000007571	-	100	88.981	Panthera_pardus
ENSTSYG00000013234	-	80	88.705	ENSPTIG00000012670	-	100	88.705	Panthera_tigris_altaica
ENSTSYG00000013234	-	99	89.769	ENSPTRG00000020427	-	99	91.172	Pan_troglodytes
ENSTSYG00000013234	-	99	89.659	ENSPANG00000019566	-	99	89.659	Papio_anubis
ENSTSYG00000013234	-	99	58.370	ENSPKIG00000014974	rad54b	99	58.370	Paramormyrops_kingsleyae
ENSTSYG00000013234	-	99	68.702	ENSPSIG00000002383	-	98	72.457	Pelodiscus_sinensis
ENSTSYG00000013234	-	100	79.628	ENSPEMG00000012133	Rad54b	100	79.628	Peromyscus_maniculatus_bairdii
ENSTSYG00000013234	-	87	59.250	ENSPMAG00000002916	rad54b	99	59.250	Petromyzon_marinus
ENSTSYG00000013234	-	89	77.998	ENSPCIG00000020151	-	94	78.027	Phascolarctos_cinereus
ENSTSYG00000013234	-	99	55.121	ENSPFOG00000023411	rad54b	99	54.890	Poecilia_formosa
ENSTSYG00000013234	-	99	55.380	ENSPLAG00000010430	rad54b	99	55.380	Poecilia_latipinna
ENSTSYG00000013234	-	99	55.614	ENSPMEG00000016873	rad54b	95	59.926	Poecilia_mexicana
ENSTSYG00000013234	-	99	56.366	ENSPREG00000018443	rad54b	99	56.366	Poecilia_reticulata
ENSTSYG00000013234	-	99	89.659	ENSPPYG00000018750	-	99	89.659	Pongo_abelii
ENSTSYG00000013234	-	99	88.791	ENSPCOG00000026845	-	99	89.793	Propithecus_coquereli
ENSTSYG00000013234	-	87	87.989	ENSPVAG00000000261	-	92	87.989	Pteropus_vampyrus
ENSTSYG00000013234	-	88	58.780	ENSPNYG00000018303	rad54b	97	58.780	Pundamilia_nyererei
ENSTSYG00000013234	-	99	54.418	ENSPNAG00000000295	rad54b	99	54.418	Pygocentrus_nattereri
ENSTSYG00000013234	-	100	76.974	ENSRNOG00000039949	Rad54b	100	76.974	Rattus_norvegicus
ENSTSYG00000013234	-	99	89.109	ENSRBIG00000020419	-	99	89.109	Rhinopithecus_bieti
ENSTSYG00000013234	-	99	89.109	ENSRROG00000039897	-	99	89.109	Rhinopithecus_roxellana
ENSTSYG00000013234	-	82	36.330	YBR073W	RDH54	82	36.765	Saccharomyces_cerevisiae
ENSTSYG00000013234	-	99	88.242	ENSSBOG00000028501	-	99	88.242	Saimiri_boliviensis_boliviensis
ENSTSYG00000013234	-	99	74.314	ENSSHAG00000017038	-	99	74.314	Sarcophilus_harrisii
ENSTSYG00000013234	-	63	64.522	ENSSFOG00015008483	rad54b	89	64.522	Scleropages_formosus
ENSTSYG00000013234	-	99	54.651	ENSSMAG00000018659	rad54b	99	54.874	Scophthalmus_maximus
ENSTSYG00000013234	-	97	54.672	ENSSDUG00000001122	rad54b	97	54.957	Seriola_dumerili
ENSTSYG00000013234	-	99	54.088	ENSSLDG00000013787	rad54b	99	54.364	Seriola_lalandi_dorsalis
ENSTSYG00000013234	-	99	68.202	ENSSPUG00000016497	-	99	68.202	Sphenodon_punctatus
ENSTSYG00000013234	-	99	55.930	ENSSPAG00000012800	rad54b	99	55.930	Stegastes_partitus
ENSTSYG00000013234	-	99	83.828	ENSSSCG00000006101	-	99	87.109	Sus_scrofa
ENSTSYG00000013234	-	99	68.004	ENSTGUG00000011880	-	99	68.004	Taeniopygia_guttata
ENSTSYG00000013234	-	99	54.355	ENSTRUG00000010015	rad54b	99	54.355	Takifugu_rubripes
ENSTSYG00000013234	-	100	82.088	ENSTTRG00000006312	-	100	82.088	Tursiops_truncatus
ENSTSYG00000013234	-	100	85.730	ENSUMAG00000016401	-	100	85.730	Ursus_maritimus
ENSTSYG00000013234	-	100	83.956	ENSVPAG00000003157	-	100	83.956	Vicugna_pacos
ENSTSYG00000013234	-	99	55.338	ENSXETG00000025924	rad54b	99	60.723	Xenopus_tropicalis
ENSTSYG00000013234	-	99	55.338	ENSXMAG00000013141	rad54b	99	55.338	Xiphophorus_maculatus