EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000014250 (Gene tree)
Gene ID: 103270742
Gene Symbol: HFM1
Alias: -
Full Name: HFM1%2C ATP dependent DNA helicase homolog
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Minus strand
Length: 107879 bases
Position: chrKE944973.1:188697-296575
Accession: 103270742
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000013087	ResIII	PF04851.15	1.7e-11	1	1
ENSTSYP00000013087	DEAD	PF00270.29	1.2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000014250	HFM1-201	4360	XM_008068270	ENSTSYP00000013087	1432 (aa)	XP_008066461	A0A1U7UKT7

Gene Model

Click here to download ENSTSYG00000014250's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000014250's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000014250	HFM1	51	38.364	ENSTSYG00000006324	ASCC3	67	38.364
ENSTSYG00000014250	HFM1	59	32.029	ENSTSYG00000010467	SNRNP200	75	32.029

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000014250	HFM1	100	87.352	ENSG00000162669	HFM1	100	87.352	Homo_sapiens
ENSTSYG00000014250	HFM1	63	66.189	ENSAPOG00000005304	hfm1	100	66.189	Acanthochromis_polyacanthus
ENSTSYG00000014250	HFM1	100	84.386	ENSAMEG00000000432	HFM1	100	84.386	Ailuropoda_melanoleuca
ENSTSYG00000014250	HFM1	71	60.058	ENSACIG00000021553	hfm1	92	60.058	Amphilophus_citrinellus
ENSTSYG00000014250	HFM1	62	66.826	ENSAOCG00000022839	hfm1	100	66.826	Amphiprion_ocellaris
ENSTSYG00000014250	HFM1	62	66.467	ENSAPEG00000014316	hfm1	100	66.467	Amphiprion_percula
ENSTSYG00000014250	HFM1	67	64.050	ENSATEG00000019181	hfm1	80	63.319	Anabas_testudineus
ENSTSYG00000014250	HFM1	100	60.521	ENSAPLG00000013639	HFM1	100	60.521	Anas_platyrhynchos
ENSTSYG00000014250	HFM1	100	83.345	ENSANAG00000029513	HFM1	100	83.345	Aotus_nancymaae
ENSTSYG00000014250	HFM1	70	60.296	ENSACLG00000009033	hfm1	97	65.476	Astatotilapia_calliptera
ENSTSYG00000014250	HFM1	86	55.396	ENSAMXG00000006108	hfm1	83	55.396	Astyanax_mexicanus
ENSTSYG00000014250	HFM1	100	83.079	ENSBTAG00000020856	HFM1	100	83.079	Bos_taurus
ENSTSYG00000014250	HFM1	100	84.920	ENSCJAG00000001843	HFM1	100	84.920	Callithrix_jacchus
ENSTSYG00000014250	HFM1	100	84.039	ENSCAFG00000020187	HFM1	100	84.039	Canis_familiaris
ENSTSYG00000014250	HFM1	99	78.312	ENSCPOG00000007421	HFM1	99	78.312	Cavia_porcellus
ENSTSYG00000014250	HFM1	100	84.920	ENSCCAG00000033206	HFM1	100	84.920	Cebus_capucinus
ENSTSYG00000014250	HFM1	100	86.866	ENSCATG00000030987	HFM1	100	86.866	Cercocebus_atys
ENSTSYG00000014250	HFM1	100	79.946	ENSCLAG00000005173	HFM1	99	79.946	Chinchilla_lanigera
ENSTSYG00000014250	HFM1	68	90.789	ENSCHOG00000011824	-	77	90.789	Choloepus_hoffmanni
ENSTSYG00000014250	HFM1	100	72.878	ENSCGRG00001016995	Hfm1	100	72.878	Cricetulus_griseus_chok1gshd
ENSTSYG00000014250	HFM1	100	77.099	ENSCGRG00000017181	Hfm1	100	77.099	Cricetulus_griseus_crigri
ENSTSYG00000014250	HFM1	72	58.255	ENSCSEG00000017659	hfm1	95	58.630	Cynoglossus_semilaevis
ENSTSYG00000014250	HFM1	50	68.194	ENSCVAG00000005075	hfm1	87	68.194	Cyprinodon_variegatus
ENSTSYG00000014250	HFM1	77	55.767	ENSDARG00000104288	hfm1	96	55.767	Danio_rerio
ENSTSYG00000014250	HFM1	100	79.071	ENSDNOG00000004776	HFM1	100	79.071	Dasypus_novemcinctus
ENSTSYG00000014250	HFM1	100	77.641	ENSDORG00000014661	Hfm1	100	77.641	Dipodomys_ordii
ENSTSYG00000014250	HFM1	70	83.957	ENSEASG00005015424	HFM1	97	83.957	Equus_asinus_asinus
ENSTSYG00000014250	HFM1	100	82.840	ENSECAG00000024039	HFM1	100	82.840	Equus_caballus
ENSTSYG00000014250	HFM1	63	66.301	ENSELUG00000018944	hfm1	97	66.301	Esox_lucius
ENSTSYG00000014250	HFM1	100	84.258	ENSFCAG00000029116	HFM1	100	84.258	Felis_catus
ENSTSYG00000014250	HFM1	100	59.551	ENSFALG00000001781	HFM1	100	60.096	Ficedula_albicollis
ENSTSYG00000014250	HFM1	100	78.471	ENSFDAG00000020816	HFM1	100	78.471	Fukomys_damarensis
ENSTSYG00000014250	HFM1	66	60.417	ENSGMOG00000017436	hfm1	100	60.417	Gadus_morhua
ENSTSYG00000014250	HFM1	71	61.272	ENSGAFG00000018093	hfm1	93	66.747	Gambusia_affinis
ENSTSYG00000014250	HFM1	67	61.515	ENSGACG00000015686	hfm1	99	61.515	Gasterosteus_aculeatus
ENSTSYG00000014250	HFM1	100	87.213	ENSGGOG00000038524	HFM1	100	87.213	Gorilla_gorilla
ENSTSYG00000014250	HFM1	65	64.952	ENSHBUG00000007309	hfm1	97	59.981	Haplochromis_burtoni
ENSTSYG00000014250	HFM1	57	64.093	ENSHCOG00000019632	hfm1	97	64.093	Hippocampus_comes
ENSTSYG00000014250	HFM1	73	60.509	ENSIPUG00000017020	hfm1	92	66.350	Ictalurus_punctatus
ENSTSYG00000014250	HFM1	100	77.014	ENSJJAG00000017198	Hfm1	100	77.014	Jaculus_jaculus
ENSTSYG00000014250	HFM1	62	63.536	ENSKMAG00000002282	hfm1	90	63.606	Kryptolebias_marmoratus
ENSTSYG00000014250	HFM1	71	60.176	ENSLBEG00000006759	hfm1	96	65.595	Labrus_bergylta
ENSTSYG00000014250	HFM1	71	65.819	ENSLACG00000010698	HFM1	100	66.008	Latimeria_chalumnae
ENSTSYG00000014250	HFM1	73	63.981	ENSLOCG00000004931	hfm1	97	64.076	Lepisosteus_oculatus
ENSTSYG00000014250	HFM1	52	88.022	ENSLAFG00000015903	-	99	88.022	Loxodonta_africana
ENSTSYG00000014250	HFM1	100	84.141	ENSMFAG00000003649	HFM1	100	84.141	Macaca_fascicularis
ENSTSYG00000014250	HFM1	100	86.657	ENSMMUG00000006819	HFM1	100	86.657	Macaca_mulatta
ENSTSYG00000014250	HFM1	58	66.063	ENSMAMG00000004623	hfm1	99	70.202	Mastacembelus_armatus
ENSTSYG00000014250	HFM1	70	60.296	ENSMZEG00005004679	hfm1	97	65.476	Maylandia_zebra
ENSTSYG00000014250	HFM1	55	76.815	ENSMGAG00000008437	HFM1	98	76.815	Meleagris_gallopavo
ENSTSYG00000014250	HFM1	100	76.560	ENSMAUG00000018858	Hfm1	100	76.560	Mesocricetus_auratus
ENSTSYG00000014250	HFM1	100	86.389	ENSMICG00000037935	HFM1	100	86.389	Microcebus_murinus
ENSTSYG00000014250	HFM1	100	74.653	ENSMOCG00000014812	Hfm1	100	74.653	Microtus_ochrogaster
ENSTSYG00000014250	HFM1	62	64.054	ENSMMOG00000006148	hfm1	95	64.617	Mola_mola
ENSTSYG00000014250	HFM1	65	63.152	ENSMALG00000002401	hfm1	94	66.226	Monopterus_albus
ENSTSYG00000014250	HFM1	96	70.696	MGP_CAROLIEiJ_G0027496	Hfm1	100	70.696	Mus_caroli
ENSTSYG00000014250	HFM1	100	76.111	ENSMUSG00000043410	Hfm1	100	76.111	Mus_musculus
ENSTSYG00000014250	HFM1	100	75.972	MGP_PahariEiJ_G0017268	Hfm1	100	75.972	Mus_pahari
ENSTSYG00000014250	HFM1	100	75.833	MGP_SPRETEiJ_G0028495	Hfm1	100	75.833	Mus_spretus
ENSTSYG00000014250	HFM1	100	80.498	ENSMPUG00000004594	HFM1	100	80.498	Mustela_putorius_furo
ENSTSYG00000014250	HFM1	100	82.064	ENSMLUG00000010200	HFM1	100	82.064	Myotis_lucifugus
ENSTSYG00000014250	HFM1	65	61.028	ENSNBRG00000002910	hfm1	97	65.981	Neolamprologus_brichardi
ENSTSYG00000014250	HFM1	100	83.553	ENSNLEG00000010285	HFM1	100	83.553	Nomascus_leucogenys
ENSTSYG00000014250	HFM1	84	68.481	ENSMEUG00000015788	HFM1	84	68.481	Notamacropus_eugenii
ENSTSYG00000014250	HFM1	84	77.559	ENSOPRG00000013916	HFM1	84	77.559	Ochotona_princeps
ENSTSYG00000014250	HFM1	71	62.146	ENSONIG00000010590	hfm1	99	62.102	Oreochromis_niloticus
ENSTSYG00000014250	HFM1	57	66.216	ENSORLG00000026844	hfm1	99	66.216	Oryzias_latipes
ENSTSYG00000014250	HFM1	85	48.441	ENSORLG00020002951	hfm1	97	48.248	Oryzias_latipes_hni
ENSTSYG00000014250	HFM1	69	61.690	ENSOMEG00000016474	hfm1	83	54.357	Oryzias_melastigma
ENSTSYG00000014250	HFM1	86	87.785	ENSOGAG00000032369	HFM1	100	87.785	Otolemur_garnettii
ENSTSYG00000014250	HFM1	100	82.732	ENSOARG00000015812	HFM1	100	82.732	Ovis_aries
ENSTSYG00000014250	HFM1	92	88.479	ENSPPAG00000024582	HFM1	100	88.479	Pan_paniscus
ENSTSYG00000014250	HFM1	100	84.466	ENSPPRG00000003270	HFM1	100	84.466	Panthera_pardus
ENSTSYG00000014250	HFM1	100	84.258	ENSPTIG00000018881	HFM1	100	84.258	Panthera_tigris_altaica
ENSTSYG00000014250	HFM1	100	87.352	ENSPTRG00000000948	HFM1	100	87.352	Pan_troglodytes
ENSTSYG00000014250	HFM1	100	86.727	ENSPANG00000009838	HFM1	100	86.727	Papio_anubis
ENSTSYG00000014250	HFM1	62	66.742	ENSPKIG00000003810	hfm1	96	66.907	Paramormyrops_kingsleyae
ENSTSYG00000014250	HFM1	58	65.942	ENSPMGG00000011059	hfm1	100	65.942	Periophthalmus_magnuspinnatus
ENSTSYG00000014250	HFM1	100	78.194	ENSPEMG00000022852	Hfm1	100	78.194	Peromyscus_maniculatus_bairdii
ENSTSYG00000014250	HFM1	100	67.584	ENSPCIG00000014233	HFM1	100	67.584	Phascolarctos_cinereus
ENSTSYG00000014250	HFM1	71	61.873	ENSPFOG00000017194	hfm1	100	62.536	Poecilia_formosa
ENSTSYG00000014250	HFM1	71	63.168	ENSPLAG00000000571	hfm1	92	63.168	Poecilia_latipinna
ENSTSYG00000014250	HFM1	71	63.056	ENSPMEG00000019475	hfm1	93	63.056	Poecilia_mexicana
ENSTSYG00000014250	HFM1	71	62.720	ENSPREG00000007803	hfm1	93	66.346	Poecilia_reticulata
ENSTSYG00000014250	HFM1	100	87.005	ENSPPYG00000001163	HFM1	100	87.005	Pongo_abelii
ENSTSYG00000014250	HFM1	74	77.578	ENSPCAG00000004289	-	74	77.578	Procavia_capensis
ENSTSYG00000014250	HFM1	100	75.469	ENSPVAG00000009713	HFM1	100	75.469	Pteropus_vampyrus
ENSTSYG00000014250	HFM1	65	63.987	ENSPNYG00000001795	hfm1	97	65.476	Pundamilia_nyererei
ENSTSYG00000014250	HFM1	59	68.123	ENSPNAG00000010865	hfm1	84	68.123	Pygocentrus_nattereri
ENSTSYG00000014250	HFM1	100	74.861	ENSRNOG00000023299	Hfm1	100	74.861	Rattus_norvegicus
ENSTSYG00000014250	HFM1	100	86.727	ENSRROG00000045569	HFM1	100	86.727	Rhinopithecus_roxellana
ENSTSYG00000014250	HFM1	100	82.488	ENSSBOG00000027456	HFM1	100	82.488	Saimiri_boliviensis_boliviensis
ENSTSYG00000014250	HFM1	60	71.594	ENSSHAG00000014616	-	98	71.594	Sarcophilus_harrisii
ENSTSYG00000014250	HFM1	86	56.235	ENSSFOG00015020129	hfm1	82	56.235	Scleropages_formosus
ENSTSYG00000014250	HFM1	62	65.111	ENSSMAG00000006907	hfm1	87	65.111	Scophthalmus_maximus
ENSTSYG00000014250	HFM1	62	66.063	ENSSDUG00000011424	hfm1	99	66.063	Seriola_dumerili
ENSTSYG00000014250	HFM1	62	66.306	ENSSLDG00000016386	hfm1	99	66.306	Seriola_lalandi_dorsalis
ENSTSYG00000014250	HFM1	64	65.273	ENSSPAG00000001023	hfm1	100	65.273	Stegastes_partitus
ENSTSYG00000014250	HFM1	100	81.090	ENSSSCG00000006912	HFM1	100	81.090	Sus_scrofa
ENSTSYG00000014250	HFM1	67	75.261	ENSTGUG00000006172	HFM1	100	75.261	Taeniopygia_guttata
ENSTSYG00000014250	HFM1	100	80.083	ENSTTRG00000013933	HFM1	100	80.083	Tursiops_truncatus
ENSTSYG00000014250	HFM1	93	82.459	ENSVPAG00000011331	HFM1	93	82.459	Vicugna_pacos
ENSTSYG00000014250	HFM1	71	82.205	ENSVVUG00000020760	HFM1	99	82.205	Vulpes_vulpes
ENSTSYG00000014250	HFM1	58	66.908	ENSXMAG00000004178	hfm1	92	66.908	Xiphophorus_maculatus