EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000014604 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Plus strand
Length: 5254 bases
Position: chrABRT02010432.1:1696-6949
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000007518	zf-CCCH	PF00642.24	5e-13	1	1
ENSTSYP00000016703	zf-CCCH	PF00642.24	7.7e-13	1	1
ENSTSYP00000015666	zf-CCCH	PF00642.24	2.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000038398	-	189	-	ENSTSYP00000015164	62 (aa)	-	UPI000C2F5075
ENSTSYT00000008190	-	738	-	ENSTSYP00000007518	245 (aa)	-	UPI000C2F77F2
ENSTSYT00000026127	-	780	-	ENSTSYP00000016703	259 (aa)	-	UPI000C2F7B31
ENSTSYT00000044638	-	633	-	ENSTSYP00000015666	210 (aa)	-	UPI000C2F341A

Gene Model

Click here to download ENSTSYG00000014604's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000014604's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000014604	-	100	91.020	ENSTSYG00000005712	-	100	91.020
ENSTSYG00000014604	-	92	96.889	ENSTSYG00000008195	-	100	97.191

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000014604	-	100	90.204	ENSG00000160917	CPSF4	100	90.625	Homo_sapiens
ENSTSYG00000014604	-	64	62.360	ENSAPOG00000004921	cpsf4	100	62.360	Acanthochromis_polyacanthus
ENSTSYG00000014604	-	100	79.259	ENSAMEG00000006252	CPSF4	100	82.222	Ailuropoda_melanoleuca
ENSTSYG00000014604	-	100	77.959	ENSACIG00000009248	cpsf4	100	78.776	Amphilophus_citrinellus
ENSTSYG00000014604	-	100	74.436	ENSAOCG00000019616	cpsf4	100	74.436	Amphiprion_ocellaris
ENSTSYG00000014604	-	100	74.436	ENSAPEG00000011679	cpsf4	100	74.436	Amphiprion_percula
ENSTSYG00000014604	-	100	77.016	ENSATEG00000007010	cpsf4	100	77.016	Anabas_testudineus
ENSTSYG00000014604	-	100	75.926	ENSACAG00000012941	CPSF4	89	77.778	Anolis_carolinensis
ENSTSYG00000014604	-	100	88.263	ENSANAG00000021360	CPSF4	100	88.263	Aotus_nancymaae
ENSTSYG00000014604	-	100	73.061	ENSACLG00000010374	cpsf4	100	73.061	Astatotilapia_calliptera
ENSTSYG00000014604	-	100	76.526	ENSAMXG00000031647	cpsf4	100	73.832	Astyanax_mexicanus
ENSTSYG00000014604	-	100	89.796	ENSBTAG00000002090	CPSF4	100	89.796	Bos_taurus
ENSTSYG00000014604	-	100	88.263	ENSCJAG00000015826	CPSF4	100	88.263	Callithrix_jacchus
ENSTSYG00000014604	-	100	88.732	ENSCAFG00000015036	CPSF4	100	88.732	Canis_familiaris
ENSTSYG00000014604	-	100	80.751	ENSCAFG00020014462	CPSF4	100	80.751	Canis_lupus_dingo
ENSTSYG00000014604	-	100	88.263	ENSCHIG00000014313	CPSF4	100	88.263	Capra_hircus
ENSTSYG00000014604	-	76	88.889	ENSCAPG00000013881	CPSF4	82	88.889	Cavia_aperea
ENSTSYG00000014604	-	100	90.612	ENSCPOG00000001783	CPSF4	100	90.612	Cavia_porcellus
ENSTSYG00000014604	-	100	88.263	ENSCCAG00000028291	CPSF4	100	88.263	Cebus_capucinus
ENSTSYG00000014604	-	100	88.263	ENSCATG00000038440	CPSF4	100	88.263	Cercocebus_atys
ENSTSYG00000014604	-	100	88.263	ENSCLAG00000007050	CPSF4	100	88.263	Chinchilla_lanigera
ENSTSYG00000014604	-	100	79.259	ENSCSAG00000017795	CPSF4	100	81.852	Chlorocebus_sabaeus
ENSTSYG00000014604	-	78	74.654	ENSCPBG00000020869	CPSF4	100	76.959	Chrysemys_picta_bellii
ENSTSYG00000014604	-	68	74.096	ENSCPBG00000010269	-	100	74.096	Chrysemys_picta_bellii
ENSTSYG00000014604	-	96	51.765	ENSCING00000021080	-	97	50.980	Ciona_intestinalis
ENSTSYG00000014604	-	96	47.518	ENSCSAVG00000011469	-	97	50.867	Ciona_savignyi
ENSTSYG00000014604	-	100	88.263	ENSCANG00000019384	CPSF4	100	88.263	Colobus_angolensis_palliatus
ENSTSYG00000014604	-	100	90.612	ENSCGRG00001024184	Cpsf4	100	90.612	Cricetulus_griseus_chok1gshd
ENSTSYG00000014604	-	100	88.732	ENSCGRG00000013892	Cpsf4	100	88.732	Cricetulus_griseus_crigri
ENSTSYG00000014604	-	100	76.056	ENSCSEG00000019055	cpsf4	100	76.056	Cynoglossus_semilaevis
ENSTSYG00000014604	-	100	73.308	ENSCVAG00000016528	cpsf4	100	73.308	Cyprinodon_variegatus
ENSTSYG00000014604	-	100	72.426	ENSDARG00000020217	cpsf4	100	72.794	Danio_rerio
ENSTSYG00000014604	-	100	79.259	ENSDNOG00000006344	CPSF4	100	82.222	Dasypus_novemcinctus
ENSTSYG00000014604	-	79	76.606	ENSDORG00000000742	Cpsf4	100	80.275	Dipodomys_ordii
ENSTSYG00000014604	-	100	46.333	FBgn0015621	Clp	99	47.782	Drosophila_melanogaster
ENSTSYG00000014604	-	76	95.455	ENSETEG00000002608	CPSF4	70	95.455	Echinops_telfairi
ENSTSYG00000014604	-	99	63.968	ENSEBUG00000012552	cpsf4	98	63.115	Eptatretus_burgeri
ENSTSYG00000014604	-	100	90.612	ENSEASG00005002487	CPSF4	100	90.612	Equus_asinus_asinus
ENSTSYG00000014604	-	100	88.732	ENSECAG00000007525	CPSF4	100	88.732	Equus_caballus
ENSTSYG00000014604	-	69	95.522	ENSEEUG00000002158	CPSF4	72	95.522	Erinaceus_europaeus
ENSTSYG00000014604	-	100	72.161	ENSELUG00000011481	cpsf4	100	72.161	Esox_lucius
ENSTSYG00000014604	-	100	88.732	ENSFCAG00000015070	CPSF4	100	88.732	Felis_catus
ENSTSYG00000014604	-	100	86.939	ENSFALG00000013799	CPSF4	100	86.939	Ficedula_albicollis
ENSTSYG00000014604	-	67	51.744	ENSFALG00000012906	-	100	51.744	Ficedula_albicollis
ENSTSYG00000014604	-	87	87.634	ENSFDAG00000014092	CPSF4	99	87.634	Fukomys_damarensis
ENSTSYG00000014604	-	100	72.556	ENSFHEG00000010880	cpsf4	100	72.556	Fundulus_heteroclitus
ENSTSYG00000014604	-	100	72.973	ENSGMOG00000002330	cpsf4	100	72.973	Gadus_morhua
ENSTSYG00000014604	-	99	33.673	ENSGALG00000004441	-	98	33.673	Gallus_gallus
ENSTSYG00000014604	-	100	86.531	ENSGALG00000004714	CPSF4	100	86.531	Gallus_gallus
ENSTSYG00000014604	-	100	73.208	ENSGAFG00000010580	cpsf4	100	73.208	Gambusia_affinis
ENSTSYG00000014604	-	100	74.118	ENSGACG00000007792	cpsf4	100	74.118	Gasterosteus_aculeatus
ENSTSYG00000014604	-	74	71.429	ENSGAGG00000020579	-	94	73.373	Gopherus_agassizii
ENSTSYG00000014604	-	100	77.407	ENSGAGG00000021835	CPSF4	100	79.259	Gopherus_agassizii
ENSTSYG00000014604	-	100	88.263	ENSGGOG00000015131	CPSF4	100	88.263	Gorilla_gorilla
ENSTSYG00000014604	-	100	72.932	ENSHBUG00000013699	cpsf4	100	72.932	Haplochromis_burtoni
ENSTSYG00000014604	-	100	88.263	ENSHGLG00000017150	CPSF4	100	88.263	Heterocephalus_glaber_female
ENSTSYG00000014604	-	83	87.079	ENSHGLG00100009215	-	100	87.079	Heterocephalus_glaber_male
ENSTSYG00000014604	-	100	65.714	ENSHGLG00100017302	-	100	65.714	Heterocephalus_glaber_male
ENSTSYG00000014604	-	100	72.556	ENSHCOG00000004397	cpsf4	100	72.556	Hippocampus_comes
ENSTSYG00000014604	-	100	70.956	ENSIPUG00000017147	cpsf4	100	72.426	Ictalurus_punctatus
ENSTSYG00000014604	-	100	90.204	ENSSTOG00000001688	CPSF4	100	90.204	Ictidomys_tridecemlineatus
ENSTSYG00000014604	-	100	88.263	ENSJJAG00000019426	Cpsf4	100	88.263	Jaculus_jaculus
ENSTSYG00000014604	-	100	71.910	ENSKMAG00000015642	cpsf4	100	71.910	Kryptolebias_marmoratus
ENSTSYG00000014604	-	100	59.109	ENSLACG00000018470	-	100	56.911	Latimeria_chalumnae
ENSTSYG00000014604	-	100	75.646	ENSLACG00000010938	CPSF4	100	75.646	Latimeria_chalumnae
ENSTSYG00000014604	-	100	74.815	ENSLOCG00000004814	cpsf4	100	77.407	Lepisosteus_oculatus
ENSTSYG00000014604	-	100	78.889	ENSLAFG00000000159	CPSF4	100	88.889	Loxodonta_africana
ENSTSYG00000014604	-	100	88.263	ENSMFAG00000001462	CPSF4	100	90.625	Macaca_fascicularis
ENSTSYG00000014604	-	100	88.263	ENSMMUG00000019191	CPSF4	100	88.263	Macaca_mulatta
ENSTSYG00000014604	-	100	88.263	ENSMNEG00000032306	CPSF4	100	88.263	Macaca_nemestrina
ENSTSYG00000014604	-	100	88.263	ENSMLEG00000034721	CPSF4	100	88.263	Mandrillus_leucophaeus
ENSTSYG00000014604	-	100	73.034	ENSMAMG00000006244	cpsf4	100	73.034	Mastacembelus_armatus
ENSTSYG00000014604	-	100	72.932	ENSMZEG00005007515	cpsf4	100	72.932	Maylandia_zebra
ENSTSYG00000014604	-	86	86.256	ENSMGAG00000004235	CPSF4	100	86.256	Meleagris_gallopavo
ENSTSYG00000014604	-	100	88.732	ENSMAUG00000021253	Cpsf4	100	88.732	Mesocricetus_auratus
ENSTSYG00000014604	-	100	88.263	ENSMICG00000017429	CPSF4	100	88.263	Microcebus_murinus
ENSTSYG00000014604	-	100	88.732	ENSMOCG00000014901	Cpsf4	100	88.732	Microtus_ochrogaster
ENSTSYG00000014604	-	100	75.587	ENSMMOG00000001813	cpsf4	95	78.788	Mola_mola
ENSTSYG00000014604	-	100	78.519	ENSMODG00000001367	CPSF4	100	80.741	Monodelphis_domestica
ENSTSYG00000014604	-	100	75.373	ENSMALG00000012611	cpsf4	100	74.254	Monopterus_albus
ENSTSYG00000014604	-	100	90.612	MGP_CAROLIEiJ_G0028012	Cpsf4	100	90.612	Mus_caroli
ENSTSYG00000014604	-	100	90.612	ENSMUSG00000029625	Cpsf4	100	90.612	Mus_musculus
ENSTSYG00000014604	-	100	90.612	MGP_PahariEiJ_G0024581	Cpsf4	100	90.612	Mus_pahari
ENSTSYG00000014604	-	100	90.204	MGP_SPRETEiJ_G0029013	Cpsf4	100	90.204	Mus_spretus
ENSTSYG00000014604	-	100	79.259	ENSMPUG00000016508	CPSF4	100	82.222	Mustela_putorius_furo
ENSTSYG00000014604	-	86	90.047	ENSMLUG00000010980	CPSF4	100	90.047	Myotis_lucifugus
ENSTSYG00000014604	-	100	88.263	ENSNGAG00000001567	Cpsf4	100	88.263	Nannospalax_galili
ENSTSYG00000014604	-	90	71.488	ENSNBRG00000003943	cpsf4	98	71.488	Neolamprologus_brichardi
ENSTSYG00000014604	-	100	90.204	ENSNLEG00000011074	CPSF4	100	90.204	Nomascus_leucogenys
ENSTSYG00000014604	-	100	78.519	ENSMEUG00000006955	CPSF4	100	80.741	Notamacropus_eugenii
ENSTSYG00000014604	-	100	78.889	ENSOPRG00000013663	CPSF4	100	81.481	Ochotona_princeps
ENSTSYG00000014604	-	98	77.178	ENSODEG00000018283	-	91	77.178	Octodon_degus
ENSTSYG00000014604	-	100	66.031	ENSODEG00000009779	-	100	66.031	Octodon_degus
ENSTSYG00000014604	-	100	88.732	ENSODEG00000011181	-	100	88.732	Octodon_degus
ENSTSYG00000014604	-	100	72.932	ENSONIG00000008495	cpsf4	100	72.932	Oreochromis_niloticus
ENSTSYG00000014604	-	100	49.821	ENSOANG00000009568	-	100	49.104	Ornithorhynchus_anatinus
ENSTSYG00000014604	-	86	79.149	ENSOANG00000007729	CPSF4	100	79.149	Ornithorhynchus_anatinus
ENSTSYG00000014604	-	100	78.889	ENSOCUG00000002437	CPSF4	70	81.481	Oryctolagus_cuniculus
ENSTSYG00000014604	-	100	73.308	ENSORLG00000022798	cpsf4	100	73.308	Oryzias_latipes
ENSTSYG00000014604	-	100	73.308	ENSORLG00020008548	cpsf4	100	73.308	Oryzias_latipes_hni
ENSTSYG00000014604	-	100	72.932	ENSORLG00015019575	cpsf4	100	72.932	Oryzias_latipes_hsok
ENSTSYG00000014604	-	100	74.648	ENSOMEG00000005176	cpsf4	100	74.648	Oryzias_melastigma
ENSTSYG00000014604	-	100	79.259	ENSOGAG00000010884	CPSF4	100	81.852	Otolemur_garnettii
ENSTSYG00000014604	-	100	71.533	ENSOARG00000018668	CPSF4	100	70.073	Ovis_aries
ENSTSYG00000014604	-	100	87.793	ENSPPAG00000043355	CPSF4	100	87.793	Pan_paniscus
ENSTSYG00000014604	-	100	88.732	ENSPPRG00000003134	CPSF4	100	88.732	Panthera_pardus
ENSTSYG00000014604	-	87	84.409	ENSPTIG00000005604	CPSF4	90	81.070	Panthera_tigris_altaica
ENSTSYG00000014604	-	100	87.793	ENSPTRG00000019453	CPSF4	100	87.793	Pan_troglodytes
ENSTSYG00000014604	-	100	88.263	ENSPANG00000023123	CPSF4	100	88.263	Papio_anubis
ENSTSYG00000014604	-	100	73.091	ENSPKIG00000014278	cpsf4	100	73.091	Paramormyrops_kingsleyae
ENSTSYG00000014604	-	79	59.391	ENSPSIG00000018198	-	100	58.763	Pelodiscus_sinensis
ENSTSYG00000014604	-	78	74.194	ENSPSIG00000011229	CPSF4	100	76.498	Pelodiscus_sinensis
ENSTSYG00000014604	-	100	73.061	ENSPMGG00000017735	cpsf4	100	71.660	Periophthalmus_magnuspinnatus
ENSTSYG00000014604	-	100	88.732	ENSPEMG00000004508	Cpsf4	100	88.732	Peromyscus_maniculatus_bairdii
ENSTSYG00000014604	-	100	78.519	ENSPCIG00000024776	CPSF4	100	80.741	Phascolarctos_cinereus
ENSTSYG00000014604	-	100	73.208	ENSPFOG00000014912	cpsf4	100	73.208	Poecilia_formosa
ENSTSYG00000014604	-	100	72.874	ENSPLAG00000009599	cpsf4	100	72.470	Poecilia_latipinna
ENSTSYG00000014604	-	100	73.208	ENSPMEG00000009790	cpsf4	100	73.208	Poecilia_mexicana
ENSTSYG00000014604	-	100	72.453	ENSPREG00000018166	cpsf4	100	69.962	Poecilia_reticulata
ENSTSYG00000014604	-	86	77.447	ENSPPYG00000017378	CPSF4	100	80.426	Pongo_abelii
ENSTSYG00000014604	-	100	78.148	ENSPCAG00000001892	CPSF4	100	81.111	Procavia_capensis
ENSTSYG00000014604	-	100	88.732	ENSPCOG00000012771	CPSF4	100	88.732	Propithecus_coquereli
ENSTSYG00000014604	-	100	72.963	ENSPVAG00000007531	CPSF4	100	75.926	Pteropus_vampyrus
ENSTSYG00000014604	-	100	72.932	ENSPNYG00000018559	cpsf4	100	72.932	Pundamilia_nyererei
ENSTSYG00000014604	-	100	74.539	ENSPNAG00000003736	cpsf4	100	74.908	Pygocentrus_nattereri
ENSTSYG00000014604	-	100	90.204	ENSRNOG00000000985	Cpsf4	100	90.204	Rattus_norvegicus
ENSTSYG00000014604	-	83	88.764	ENSRBIG00000033886	CPSF4	100	88.764	Rhinopithecus_bieti
ENSTSYG00000014604	-	100	90.204	ENSRROG00000040431	CPSF4	100	90.204	Rhinopithecus_roxellana
ENSTSYG00000014604	-	100	88.263	ENSSBOG00000020493	CPSF4	100	90.625	Saimiri_boliviensis_boliviensis
ENSTSYG00000014604	-	100	78.519	ENSSHAG00000011533	CPSF4	100	80.741	Sarcophilus_harrisii
ENSTSYG00000014604	-	100	74.368	ENSSFOG00015007883	cpsf4	100	74.368	Scleropages_formosus
ENSTSYG00000014604	-	100	78.455	ENSSMAG00000006374	cpsf4	100	78.455	Scophthalmus_maximus
ENSTSYG00000014604	-	100	73.881	ENSSDUG00000018887	cpsf4	100	73.881	Seriola_dumerili
ENSTSYG00000014604	-	100	73.881	ENSSLDG00000019078	cpsf4	100	73.881	Seriola_lalandi_dorsalis
ENSTSYG00000014604	-	86	78.298	ENSSARG00000012416	CPSF4	100	81.277	Sorex_araneus
ENSTSYG00000014604	-	100	78.148	ENSSPUG00000003549	CPSF4	100	78.148	Sphenodon_punctatus
ENSTSYG00000014604	-	96	59.916	ENSSPUG00000014803	-	97	59.494	Sphenodon_punctatus
ENSTSYG00000014604	-	100	80.000	ENSSPAG00000006174	cpsf4	100	80.000	Stegastes_partitus
ENSTSYG00000014604	-	100	90.204	ENSSSCG00000026896	CPSF4	100	90.204	Sus_scrofa
ENSTSYG00000014604	-	100	85.830	ENSTGUG00000007552	CPSF4	100	85.830	Taeniopygia_guttata
ENSTSYG00000014604	-	100	71.212	ENSTRUG00000024220	cpsf4	100	71.212	Takifugu_rubripes
ENSTSYG00000014604	-	100	70.833	ENSTNIG00000006265	cpsf4	100	71.591	Tetraodon_nigroviridis
ENSTSYG00000014604	-	86	71.064	ENSTBEG00000011406	CPSF4	100	71.064	Tupaia_belangeri
ENSTSYG00000014604	-	81	95.455	ENSTTRG00000003007	CPSF4	74	95.455	Tursiops_truncatus
ENSTSYG00000014604	-	91	90.090	ENSUAMG00000008051	CPSF4	88	88.646	Ursus_americanus
ENSTSYG00000014604	-	100	90.204	ENSUMAG00000009474	CPSF4	100	90.204	Ursus_maritimus
ENSTSYG00000014604	-	100	90.204	ENSVVUG00000008824	CPSF4	100	90.204	Vulpes_vulpes
ENSTSYG00000014604	-	99	56.929	ENSXETG00000004641	cpsf4l	99	55.431	Xenopus_tropicalis
ENSTSYG00000014604	-	100	73.929	ENSXETG00000009892	cpsf4	100	75.357	Xenopus_tropicalis
ENSTSYG00000014604	-	100	75.587	ENSXCOG00000016040	cpsf4	100	75.587	Xiphophorus_couchianus
ENSTSYG00000014604	-	100	73.208	ENSXMAG00000024670	cpsf4	100	73.208	Xiphophorus_maculatus