EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTSYG00000014688 (Gene tree)
Gene ID: 103273564
Gene Symbol: RBM42
Alias: -
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Plus strand
Length: 8010 bases
Position: chrKE948595.1:265959-273968
Accession: 103273564
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000013477	RRM_1	PF00076.22	6.1e-18	1	1
ENSTSYP00000034858	RRM_1	PF00076.22	6.8e-18	1	1
ENSTSYP00000034954	RRM_1	PF00076.22	7.4e-18	1	1
ENSTSYP00000015401	RRM_1	PF00076.22	6.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000049896	RBM42-202	1371	-	ENSTSYP00000034858	456 (aa)	-	UPI000C2F58A6
ENSTSYT00000014688	RBM42-203	1275	-	ENSTSYP00000013477	424 (aa)	-	UPI000C2F7F39
ENSTSYT00000033789	RBM42-201	1635	XM_008070993	ENSTSYP00000034954	478 (aa)	XP_008069184	A0A1U7UA89
ENSTSYT00000035720	RBM42-204	1155	-	ENSTSYP00000014161	384 (aa)	-	UPI000C2F5657
ENSTSYT00000029835	RBM42-205	546	-	ENSTSYP00000015401	181 (aa)	-	UPI000C2F4E83

Gene Model

Click here to download ENSTSYG00000014688's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000014688's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000014688	RBM42	100	100.000	ENSG00000126254	RBM42	100	100.000	Homo_sapiens
ENSTSYG00000014688	RBM42	100	97.708	ENSAMEG00000000524	RBM42	100	97.708	Ailuropoda_melanoleuca
ENSTSYG00000014688	RBM42	85	95.775	ENSACAG00000005495	RBM42	99	57.884	Anolis_carolinensis
ENSTSYG00000014688	RBM42	100	100.000	ENSANAG00000027537	RBM42	100	100.000	Aotus_nancymaae
ENSTSYG00000014688	RBM42	100	100.000	ENSBTAG00000013440	RBM42	100	98.246	Bos_taurus
ENSTSYG00000014688	RBM42	100	100.000	ENSCJAG00000010220	RBM42	100	100.000	Callithrix_jacchus
ENSTSYG00000014688	RBM42	100	100.000	ENSCAFG00020018628	RBM42	96	100.000	Canis_lupus_dingo
ENSTSYG00000014688	RBM42	100	100.000	ENSCHIG00000009518	RBM42	100	97.280	Capra_hircus
ENSTSYG00000014688	RBM42	81	97.416	ENSCAPG00000009566	RBM42	99	97.416	Cavia_aperea
ENSTSYG00000014688	RBM42	100	100.000	ENSCPOG00000012365	RBM42	99	97.490	Cavia_porcellus
ENSTSYG00000014688	RBM42	100	100.000	ENSCCAG00000034440	RBM42	100	100.000	Cebus_capucinus
ENSTSYG00000014688	RBM42	100	100.000	ENSCATG00000041924	RBM42	100	100.000	Cercocebus_atys
ENSTSYG00000014688	RBM42	100	100.000	ENSCLAG00000012865	RBM42	99	96.862	Chinchilla_lanigera
ENSTSYG00000014688	RBM42	100	100.000	ENSCSAG00000004422	RBM42	100	96.296	Chlorocebus_sabaeus
ENSTSYG00000014688	RBM42	100	87.866	ENSCANG00000030272	RBM42	100	88.285	Colobus_angolensis_palliatus
ENSTSYG00000014688	RBM42	100	100.000	ENSCGRG00001018540	Rbm42	99	97.280	Cricetulus_griseus_chok1gshd
ENSTSYG00000014688	RBM42	100	100.000	ENSDNOG00000037397	RBM42	100	96.875	Dasypus_novemcinctus
ENSTSYG00000014688	RBM42	97	100.000	ENSDORG00000013001	Rbm42	99	96.444	Dipodomys_ordii
ENSTSYG00000014688	RBM42	93	94.203	ENSETEG00000007878	RBM42	74	94.203	Echinops_telfairi
ENSTSYG00000014688	RBM42	100	100.000	ENSEASG00005001074	RBM42	100	96.272	Equus_asinus_asinus
ENSTSYG00000014688	RBM42	100	100.000	ENSECAG00000018215	RBM42	100	96.272	Equus_caballus
ENSTSYG00000014688	RBM42	100	100.000	ENSFCAG00000006376	RBM42	100	100.000	Felis_catus
ENSTSYG00000014688	RBM42	100	100.000	ENSFDAG00000007440	RBM42	99	96.033	Fukomys_damarensis
ENSTSYG00000014688	RBM42	100	100.000	ENSGGOG00000009972	RBM42	100	100.000	Gorilla_gorilla
ENSTSYG00000014688	RBM42	100	95.397	ENSHGLG00000008418	RBM42	99	95.397	Heterocephalus_glaber_female
ENSTSYG00000014688	RBM42	100	95.397	ENSHGLG00100018667	RBM42	99	95.397	Heterocephalus_glaber_male
ENSTSYG00000014688	RBM42	100	100.000	ENSSTOG00000013050	RBM42	100	96.653	Ictidomys_tridecemlineatus
ENSTSYG00000014688	RBM42	100	100.000	ENSJJAG00000010421	Rbm42	99	95.816	Jaculus_jaculus
ENSTSYG00000014688	RBM42	97	98.485	ENSLAFG00000014993	RBM42	99	95.397	Loxodonta_africana
ENSTSYG00000014688	RBM42	100	100.000	ENSMFAG00000002758	RBM42	100	100.000	Macaca_fascicularis
ENSTSYG00000014688	RBM42	100	100.000	ENSMMUG00000018954	RBM42	100	100.000	Macaca_mulatta
ENSTSYG00000014688	RBM42	100	100.000	ENSMNEG00000030009	RBM42	100	100.000	Macaca_nemestrina
ENSTSYG00000014688	RBM42	100	100.000	ENSMLEG00000036119	RBM42	100	100.000	Mandrillus_leucophaeus
ENSTSYG00000014688	RBM42	100	100.000	ENSMICG00000009880	RBM42	100	100.000	Microcebus_murinus
ENSTSYG00000014688	RBM42	100	100.000	ENSMOCG00000000405	Rbm42	99	97.071	Microtus_ochrogaster
ENSTSYG00000014688	RBM42	83	100.000	ENSMODG00000013957	RBM42	83	82.474	Monodelphis_domestica
ENSTSYG00000014688	RBM42	100	100.000	MGP_CAROLIEiJ_G0029536	Rbm42	99	96.862	Mus_caroli
ENSTSYG00000014688	RBM42	100	100.000	ENSMUSG00000036733	Rbm42	99	96.862	Mus_musculus
ENSTSYG00000014688	RBM42	100	100.000	MGP_PahariEiJ_G0012770	Rbm42	99	96.862	Mus_pahari
ENSTSYG00000014688	RBM42	100	100.000	MGP_SPRETEiJ_G0030632	Rbm42	99	96.862	Mus_spretus
ENSTSYG00000014688	RBM42	100	100.000	ENSMPUG00000006288	RBM42	100	96.930	Mustela_putorius_furo
ENSTSYG00000014688	RBM42	100	100.000	ENSMLUG00000011334	RBM42	100	97.280	Myotis_lucifugus
ENSTSYG00000014688	RBM42	100	100.000	ENSNGAG00000019698	Rbm42	99	96.653	Nannospalax_galili
ENSTSYG00000014688	RBM42	85	83.106	ENSNLEG00000011272	-	94	91.365	Nomascus_leucogenys
ENSTSYG00000014688	RBM42	90	100.000	ENSMEUG00000016300	RBM42	100	82.305	Notamacropus_eugenii
ENSTSYG00000014688	RBM42	100	100.000	ENSOPRG00000001229	RBM42	100	91.423	Ochotona_princeps
ENSTSYG00000014688	RBM42	100	100.000	ENSODEG00000013705	RBM42	99	97.071	Octodon_degus
ENSTSYG00000014688	RBM42	100	100.000	ENSOCUG00000003337	RBM42	100	95.425	Oryctolagus_cuniculus
ENSTSYG00000014688	RBM42	100	100.000	ENSOGAG00000004144	RBM42	100	96.862	Otolemur_garnettii
ENSTSYG00000014688	RBM42	99	100.000	ENSOARG00000004926	RBM42	98	93.082	Ovis_aries
ENSTSYG00000014688	RBM42	100	100.000	ENSPPAG00000037315	RBM42	100	100.000	Pan_paniscus
ENSTSYG00000014688	RBM42	100	100.000	ENSPPRG00000016784	RBM42	100	100.000	Panthera_pardus
ENSTSYG00000014688	RBM42	100	100.000	ENSPTIG00000019270	RBM42	100	100.000	Panthera_tigris_altaica
ENSTSYG00000014688	RBM42	100	100.000	ENSPTRG00000010852	RBM42	100	100.000	Pan_troglodytes
ENSTSYG00000014688	RBM42	100	100.000	ENSPANG00000017032	RBM42	100	100.000	Papio_anubis
ENSTSYG00000014688	RBM42	100	100.000	ENSPEMG00000012065	Rbm42	99	97.280	Peromyscus_maniculatus_bairdii
ENSTSYG00000014688	RBM42	100	100.000	ENSPCIG00000015737	RBM42	100	82.474	Phascolarctos_cinereus
ENSTSYG00000014688	RBM42	100	100.000	ENSPPYG00000009871	RBM42	100	97.320	Pongo_abelii
ENSTSYG00000014688	RBM42	100	94.505	ENSPCAG00000013053	RBM42	88	94.505	Procavia_capensis
ENSTSYG00000014688	RBM42	97	74.246	ENSPCOG00000020672	RBM42	81	98.503	Propithecus_coquereli
ENSTSYG00000014688	RBM42	100	100.000	ENSPCOG00000026433	-	100	100.000	Propithecus_coquereli
ENSTSYG00000014688	RBM42	100	100.000	ENSPVAG00000012815	RBM42	100	98.326	Pteropus_vampyrus
ENSTSYG00000014688	RBM42	100	100.000	ENSRNOG00000024278	Rbm42	99	97.071	Rattus_norvegicus
ENSTSYG00000014688	RBM42	100	100.000	ENSRBIG00000007566	RBM42	100	100.000	Rhinopithecus_bieti
ENSTSYG00000014688	RBM42	100	100.000	ENSRROG00000042313	RBM42	100	100.000	Rhinopithecus_roxellana
ENSTSYG00000014688	RBM42	90	98.163	ENSSBOG00000030666	RBM42	100	98.526	Saimiri_boliviensis_boliviensis
ENSTSYG00000014688	RBM42	100	86.902	ENSSARG00000010724	RBM42	100	86.902	Sorex_araneus
ENSTSYG00000014688	RBM42	100	100.000	ENSSSCG00000002905	RBM42	100	97.170	Sus_scrofa
ENSTSYG00000014688	RBM42	100	100.000	ENSUAMG00000020711	RBM42	100	97.908	Ursus_americanus
ENSTSYG00000014688	RBM42	100	100.000	ENSUMAG00000020223	RBM42	100	97.908	Ursus_maritimus
ENSTSYG00000014688	RBM42	100	100.000	ENSVVUG00000015117	RBM42	100	96.444	Vulpes_vulpes