EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000025721 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: U1 small nuclear ribonucleoprotein C pseudogene
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Minus strand
Length: 478 bases
Position: chrKE931348.1:57212-57689
Accession: 103251764
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000017573	zf-U1	PF06220.12	3.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000042507	-	423	-	ENSTSYP00000017573	140 (aa)	-	UPI000C2F55C4

Gene Model

Click here to download ENSTSYG00000025721's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000025721's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000025721	-	79	76.423	ENSTSYG00000032340	-	91	75.000
ENSTSYG00000025721	-	100	76.101	ENSTSYG00000011216	-	100	83.019
ENSTSYG00000025721	-	84	81.395	ENSTSYG00000029745	-	78	74.194

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000025721	-	100	76.101	ENSG00000124562	SNRPC	100	83.019	Homo_sapiens
ENSTSYG00000025721	-	100	72.327	ENSAMEG00000000963	SNRPC	87	82.166	Ailuropoda_melanoleuca
ENSTSYG00000025721	-	100	69.811	ENSACAG00000015721	SNRPC	87	80.255	Anolis_carolinensis
ENSTSYG00000025721	-	100	76.101	ENSANAG00000007843	-	100	83.019	Aotus_nancymaae
ENSTSYG00000025721	-	100	68.553	ENSANAG00000019726	-	92	74.214	Aotus_nancymaae
ENSTSYG00000025721	-	100	76.101	ENSANAG00000019696	-	100	83.019	Aotus_nancymaae
ENSTSYG00000025721	-	100	65.541	ENSANAG00000021444	-	100	62.838	Aotus_nancymaae
ENSTSYG00000025721	-	99	74.051	ENSANAG00000020588	-	92	74.051	Aotus_nancymaae
ENSTSYG00000025721	-	100	71.698	ENSANAG00000021026	-	100	64.780	Aotus_nancymaae
ENSTSYG00000025721	-	100	76.730	ENSANAG00000019157	-	100	79.874	Aotus_nancymaae
ENSTSYG00000025721	-	100	68.707	ENSAMXG00000032641	snrpc	100	68.707	Astyanax_mexicanus
ENSTSYG00000025721	-	100	76.101	ENSBTAG00000024549	SNRPC	100	83.019	Bos_taurus
ENSTSYG00000025721	-	100	76.101	ENSCJAG00000015321	-	100	83.019	Callithrix_jacchus
ENSTSYG00000025721	-	100	77.358	ENSCJAG00000043055	-	100	82.390	Callithrix_jacchus
ENSTSYG00000025721	-	100	74.214	ENSCJAG00000041822	-	100	81.132	Callithrix_jacchus
ENSTSYG00000025721	-	100	74.843	ENSCAFG00000031775	-	100	79.245	Canis_familiaris
ENSTSYG00000025721	-	100	65.409	ENSCAFG00000025525	-	100	66.667	Canis_familiaris
ENSTSYG00000025721	-	100	64.375	ENSCAFG00000028988	-	100	67.500	Canis_familiaris
ENSTSYG00000025721	-	60	75.000	ENSCAFG00000001231	-	76	81.250	Canis_familiaris
ENSTSYG00000025721	-	100	76.101	ENSCAFG00020005945	-	100	83.019	Canis_lupus_dingo
ENSTSYG00000025721	-	100	74.843	ENSCAFG00020017383	-	100	79.245	Canis_lupus_dingo
ENSTSYG00000025721	-	99	69.427	ENSCAFG00020009944	-	90	73.248	Canis_lupus_dingo
ENSTSYG00000025721	-	100	57.865	ENSCAFG00020026577	-	100	62.360	Canis_lupus_dingo
ENSTSYG00000025721	-	100	71.698	ENSCAFG00020005758	-	99	80.892	Canis_lupus_dingo
ENSTSYG00000025721	-	100	75.472	ENSCHIG00000012087	-	100	82.390	Capra_hircus
ENSTSYG00000025721	-	88	73.944	ENSCAPG00000005161	SNRPC	100	81.690	Cavia_aperea
ENSTSYG00000025721	-	100	76.101	ENSCPOG00000008563	SNRPC	100	83.019	Cavia_porcellus
ENSTSYG00000025721	-	99	72.414	ENSCCAG00000026624	-	66	80.000	Cebus_capucinus
ENSTSYG00000025721	-	100	55.346	ENSCCAG00000028293	-	100	55.346	Cebus_capucinus
ENSTSYG00000025721	-	100	70.440	ENSCCAG00000036059	-	89	79.245	Cebus_capucinus
ENSTSYG00000025721	-	98	74.359	ENSCCAG00000022751	-	95	75.000	Cebus_capucinus
ENSTSYG00000025721	-	98	70.139	ENSCCAG00000022209	-	95	73.611	Cebus_capucinus
ENSTSYG00000025721	-	100	76.101	ENSCATG00000035787	SNRPC	100	83.019	Cercocebus_atys
ENSTSYG00000025721	-	100	76.101	ENSCLAG00000016920	SNRPC	100	83.019	Chinchilla_lanigera
ENSTSYG00000025721	-	99	66.452	ENSCLAG00000010242	-	96	67.742	Chinchilla_lanigera
ENSTSYG00000025721	-	100	57.865	ENSCSAG00000009821	SNRPC	100	62.360	Chlorocebus_sabaeus
ENSTSYG00000025721	-	100	64.780	ENSCHOG00000011439	SNRPC	88	65.605	Choloepus_hoffmanni
ENSTSYG00000025721	-	100	74.214	ENSCPBG00000027142	SNRPC	100	81.132	Chrysemys_picta_bellii
ENSTSYG00000025721	-	100	76.101	ENSCANG00000028035	SNRPC	100	83.019	Colobus_angolensis_palliatus
ENSTSYG00000025721	-	100	82.313	ENSCGRG00001021483	-	100	85.714	Cricetulus_griseus_chok1gshd
ENSTSYG00000025721	-	100	76.101	ENSCGRG00001009011	-	100	82.390	Cricetulus_griseus_chok1gshd
ENSTSYG00000025721	-	100	72.327	ENSCGRG00000005005	Snrpc	99	81.529	Cricetulus_griseus_crigri
ENSTSYG00000025721	-	100	64.198	ENSDARG00000009871	snrpc	100	69.182	Danio_rerio
ENSTSYG00000025721	-	100	76.730	ENSDNOG00000034699	-	99	83.648	Dasypus_novemcinctus
ENSTSYG00000025721	-	60	71.875	ENSDNOG00000042403	-	76	81.250	Dasypus_novemcinctus
ENSTSYG00000025721	-	81	65.873	ENSDORG00000029823	-	100	64.238	Dipodomys_ordii
ENSTSYG00000025721	-	100	58.824	ENSDORG00000005955	Snrpc	66	63.694	Dipodomys_ordii
ENSTSYG00000025721	-	51	77.108	ENSETEG00000008268	-	100	79.487	Echinops_telfairi
ENSTSYG00000025721	-	98	76.923	ENSETEG00000011265	-	100	78.205	Echinops_telfairi
ENSTSYG00000025721	-	100	44.444	ENSEBUG00000011445	snrpc	91	41.667	Eptatretus_burgeri
ENSTSYG00000025721	-	100	76.101	ENSEASG00005021007	SNRPC	100	83.019	Equus_asinus_asinus
ENSTSYG00000025721	-	100	76.101	ENSECAG00000026848	SNRPC	100	83.019	Equus_caballus
ENSTSYG00000025721	-	99	65.823	ENSEEUG00000014633	SNRPC	90	65.823	Erinaceus_europaeus
ENSTSYG00000025721	-	100	63.354	ENSELUG00000000815	SNRPC	100	64.151	Esox_lucius
ENSTSYG00000025721	-	100	55.488	ENSELUG00000020489	snrpc	100	58.125	Esox_lucius
ENSTSYG00000025721	-	100	76.101	ENSFCAG00000044077	-	100	83.019	Felis_catus
ENSTSYG00000025721	-	100	75.000	ENSFCAG00000031775	-	88	80.921	Felis_catus
ENSTSYG00000025721	-	100	75.472	ENSFALG00000003756	SNRPC	100	82.390	Ficedula_albicollis
ENSTSYG00000025721	-	100	76.101	ENSFDAG00000018111	SNRPC	100	83.019	Fukomys_damarensis
ENSTSYG00000025721	-	100	75.000	ENSGALG00000002773	SNRPC	100	81.875	Gallus_gallus
ENSTSYG00000025721	-	100	74.214	ENSGAGG00000003063	SNRPC	100	81.132	Gopherus_agassizii
ENSTSYG00000025721	-	100	76.101	ENSGGOG00000012499	SNRPC	100	83.019	Gorilla_gorilla
ENSTSYG00000025721	-	100	65.806	ENSHGLG00000017741	-	100	70.861	Heterocephalus_glaber_female
ENSTSYG00000025721	-	84	59.690	ENSHGLG00000005871	-	100	61.635	Heterocephalus_glaber_female
ENSTSYG00000025721	-	100	76.101	ENSHGLG00000013981	SNRPC	100	83.019	Heterocephalus_glaber_female
ENSTSYG00000025721	-	100	65.806	ENSHGLG00100010786	-	100	70.861	Heterocephalus_glaber_male
ENSTSYG00000025721	-	100	76.101	ENSHGLG00100009478	SNRPC	100	83.019	Heterocephalus_glaber_male
ENSTSYG00000025721	-	100	76.730	ENSHGLG00100017764	-	100	79.245	Heterocephalus_glaber_male
ENSTSYG00000025721	-	100	69.811	ENSIPUG00000024851	snrpc	100	69.811	Ictalurus_punctatus
ENSTSYG00000025721	-	100	76.101	ENSSTOG00000013786	SNRPC	100	83.019	Ictidomys_tridecemlineatus
ENSTSYG00000025721	-	100	76.101	ENSJJAG00000021741	Snrpc	100	82.390	Jaculus_jaculus
ENSTSYG00000025721	-	76	71.311	ENSLACG00000013753	SNRPC	88	72.152	Latimeria_chalumnae
ENSTSYG00000025721	-	100	76.101	ENSLAFG00000013534	SNRPC	100	83.019	Loxodonta_africana
ENSTSYG00000025721	-	100	75.472	ENSMFAG00000030525	-	100	82.390	Macaca_fascicularis
ENSTSYG00000025721	-	100	76.101	ENSMFAG00000031764	-	100	83.019	Macaca_fascicularis
ENSTSYG00000025721	-	100	76.730	ENSMMUG00000039415	-	100	81.761	Macaca_mulatta
ENSTSYG00000025721	-	100	74.843	ENSMMUG00000000869	-	95	82.692	Macaca_mulatta
ENSTSYG00000025721	-	100	71.069	ENSMMUG00000045425	-	100	74.214	Macaca_mulatta
ENSTSYG00000025721	-	100	76.101	ENSMNEG00000032731	SNRPC	100	83.019	Macaca_nemestrina
ENSTSYG00000025721	-	96	59.091	ENSMLEG00000039724	-	81	57.792	Mandrillus_leucophaeus
ENSTSYG00000025721	-	100	76.101	ENSMLEG00000033916	-	100	83.019	Mandrillus_leucophaeus
ENSTSYG00000025721	-	97	72.258	ENSMLEG00000040224	-	89	75.484	Mandrillus_leucophaeus
ENSTSYG00000025721	-	100	73.418	ENSMGAG00000006054	SNRPC	100	76.582	Meleagris_gallopavo
ENSTSYG00000025721	-	100	64.780	ENSMICG00000036552	-	87	70.513	Microcebus_murinus
ENSTSYG00000025721	-	100	66.667	ENSMICG00000009130	-	100	68.707	Microcebus_murinus
ENSTSYG00000025721	-	100	74.214	ENSMICG00000007339	-	100	80.503	Microcebus_murinus
ENSTSYG00000025721	-	100	77.987	ENSMICG00000032183	-	100	82.390	Microcebus_murinus
ENSTSYG00000025721	-	100	76.101	ENSMOCG00000017609	Snrpc	100	82.390	Microtus_ochrogaster
ENSTSYG00000025721	-	100	72.956	ENSMODG00000013904	-	100	82.390	Monodelphis_domestica
ENSTSYG00000025721	-	100	53.741	ENSMALG00000001197	snrpc	100	56.376	Monopterus_albus
ENSTSYG00000025721	-	100	76.101	MGP_CAROLIEiJ_G0021308	Snrpc	100	82.390	Mus_caroli
ENSTSYG00000025721	-	100	76.101	ENSMUSG00000024217	Snrpc	100	82.390	Mus_musculus
ENSTSYG00000025721	-	60	70.408	MGP_SPRETEiJ_G0022221	-	80	80.208	Mus_spretus
ENSTSYG00000025721	-	100	74.214	ENSMPUG00000003210	SNRPC	99	82.166	Mustela_putorius_furo
ENSTSYG00000025721	-	100	74.214	ENSMLUG00000002488	SNRPC	99	82.166	Myotis_lucifugus
ENSTSYG00000025721	-	100	76.101	ENSNGAG00000019686	Snrpc	100	82.390	Nannospalax_galili
ENSTSYG00000025721	-	100	76.101	ENSNLEG00000034810	SNRPC	100	83.019	Nomascus_leucogenys
ENSTSYG00000025721	-	88	73.944	ENSMEUG00000009300	SNRPC	100	81.690	Notamacropus_eugenii
ENSTSYG00000025721	-	100	73.585	ENSODEG00000020201	-	100	83.019	Octodon_degus
ENSTSYG00000025721	-	79	74.797	ENSODEG00000006008	-	96	80.597	Octodon_degus
ENSTSYG00000025721	-	100	76.101	ENSODEG00000018985	-	100	83.019	Octodon_degus
ENSTSYG00000025721	-	100	76.101	ENSODEG00000020370	-	100	83.019	Octodon_degus
ENSTSYG00000025721	-	100	74.843	ENSODEG00000019633	-	100	81.761	Octodon_degus
ENSTSYG00000025721	-	100	76.101	ENSODEG00000017080	-	100	83.019	Octodon_degus
ENSTSYG00000025721	-	89	68.707	ENSOANG00000003405	SNRPC	100	78.378	Ornithorhynchus_anatinus
ENSTSYG00000025721	-	100	74.214	ENSOCUG00000023292	-	100	81.132	Oryctolagus_cuniculus
ENSTSYG00000025721	-	100	78.616	ENSOCUG00000026430	-	99	81.761	Oryctolagus_cuniculus
ENSTSYG00000025721	-	100	76.101	ENSOCUG00000026668	-	100	83.019	Oryctolagus_cuniculus
ENSTSYG00000025721	-	64	68.478	ENSORLG00020012607	SNRPC	97	67.133	Oryzias_latipes_hni
ENSTSYG00000025721	-	100	74.214	ENSOGAG00000026269	-	100	81.132	Otolemur_garnettii
ENSTSYG00000025721	-	96	68.182	ENSOGAG00000028405	-	99	64.052	Otolemur_garnettii
ENSTSYG00000025721	-	97	75.484	ENSOGAG00000008755	-	88	82.166	Otolemur_garnettii
ENSTSYG00000025721	-	100	76.101	ENSOARG00000010823	SNRPC	100	83.019	Ovis_aries
ENSTSYG00000025721	-	100	76.101	ENSPPAG00000043871	SNRPC	100	83.019	Pan_paniscus
ENSTSYG00000025721	-	95	56.209	ENSPPRG00000016017	-	86	56.209	Panthera_pardus
ENSTSYG00000025721	-	100	55.782	ENSPPRG00000010967	-	89	48.571	Panthera_pardus
ENSTSYG00000025721	-	100	76.101	ENSPPRG00000008647	-	100	83.019	Panthera_pardus
ENSTSYG00000025721	-	100	52.381	ENSPTIG00000011880	-	88	48.980	Panthera_tigris_altaica
ENSTSYG00000025721	-	100	76.101	ENSPTIG00000021867	-	100	83.019	Panthera_tigris_altaica
ENSTSYG00000025721	-	54	66.667	ENSPTIG00000013329	-	84	49.677	Panthera_tigris_altaica
ENSTSYG00000025721	-	100	76.101	ENSPTRG00000018070	SNRPC	100	83.019	Pan_troglodytes
ENSTSYG00000025721	-	100	71.069	ENSPANG00000018228	-	94	73.585	Papio_anubis
ENSTSYG00000025721	-	100	76.101	ENSPANG00000022802	-	100	83.019	Papio_anubis
ENSTSYG00000025721	-	100	66.250	ENSPKIG00000001671	SNRPC	100	65.409	Paramormyrops_kingsleyae
ENSTSYG00000025721	-	57	62.766	ENSPKIG00000003136	snrpc	100	70.968	Paramormyrops_kingsleyae
ENSTSYG00000025721	-	99	73.248	ENSPSIG00000004876	SNRPC	77	80.255	Pelodiscus_sinensis
ENSTSYG00000025721	-	98	54.167	ENSPMGG00000022162	snrpc	100	57.534	Periophthalmus_magnuspinnatus
ENSTSYG00000025721	-	100	76.101	ENSPEMG00000010773	Snrpc	100	82.390	Peromyscus_maniculatus_bairdii
ENSTSYG00000025721	-	100	69.620	ENSPEMG00000002763	-	100	70.253	Peromyscus_maniculatus_bairdii
ENSTSYG00000025721	-	99	62.500	ENSPMAG00000000602	snrpc	98	56.579	Petromyzon_marinus
ENSTSYG00000025721	-	56	66.250	ENSPREG00000013017	snrpc	79	65.517	Poecilia_reticulata
ENSTSYG00000025721	-	51	72.289	ENSPPYG00000029902	-	51	90.000	Pongo_abelii
ENSTSYG00000025721	-	100	74.214	ENSPCAG00000016885	SNRPC	90	82.166	Procavia_capensis
ENSTSYG00000025721	-	100	76.101	ENSPCOG00000004904	SNRPC	100	83.019	Propithecus_coquereli
ENSTSYG00000025721	-	100	71.698	ENSPVAG00000015597	SNRPC	87	81.529	Pteropus_vampyrus
ENSTSYG00000025721	-	57	63.750	ENSPNYG00000004900	snrpc	100	53.741	Pundamilia_nyererei
ENSTSYG00000025721	-	100	62.092	ENSPNAG00000012799	snrpc	100	64.151	Pygocentrus_nattereri
ENSTSYG00000025721	-	100	76.101	ENSRNOG00000000493	Snrpc	100	82.390	Rattus_norvegicus
ENSTSYG00000025721	-	100	76.101	ENSRBIG00000037567	-	100	83.019	Rhinopithecus_bieti
ENSTSYG00000025721	-	100	75.472	ENSRBIG00000022998	-	100	82.390	Rhinopithecus_bieti
ENSTSYG00000025721	-	100	75.472	ENSRBIG00000014819	-	100	82.390	Rhinopithecus_bieti
ENSTSYG00000025721	-	100	71.069	ENSRBIG00000036353	-	83	74.214	Rhinopithecus_bieti
ENSTSYG00000025721	-	100	76.101	ENSRROG00000041300	SNRPC	100	83.019	Rhinopithecus_roxellana
ENSTSYG00000025721	-	98	67.308	ENSSBOG00000032882	-	93	65.972	Saimiri_boliviensis_boliviensis
ENSTSYG00000025721	-	98	67.949	ENSSBOG00000023189	-	91	67.949	Saimiri_boliviensis_boliviensis
ENSTSYG00000025721	-	100	76.101	ENSSBOG00000031528	-	100	83.019	Saimiri_boliviensis_boliviensis
ENSTSYG00000025721	-	94	76.923	ENSSBOG00000032361	-	94	76.923	Saimiri_boliviensis_boliviensis
ENSTSYG00000025721	-	99	72.611	ENSSHAG00000000945	-	87	82.166	Sarcophilus_harrisii
ENSTSYG00000025721	-	66	64.486	ENSSFOG00015022422	snrpc	99	70.323	Scleropages_formosus
ENSTSYG00000025721	-	100	66.667	ENSSFOG00015019150	snrpc	100	66.667	Scleropages_formosus
ENSTSYG00000025721	-	100	52.830	ENSSARG00000008970	SNRPC	89	59.748	Sorex_araneus
ENSTSYG00000025721	-	100	75.472	ENSSPUG00000002502	SNRPC	100	82.390	Sphenodon_punctatus
ENSTSYG00000025721	-	100	76.101	ENSSSCG00000001531	SNRPC	100	83.019	Sus_scrofa
ENSTSYG00000025721	-	100	74.214	ENSTGUG00000001773	SNRPC	100	81.132	Taeniopygia_guttata
ENSTSYG00000025721	-	100	55.034	ENSTRUG00000021651	snrpc	100	61.745	Takifugu_rubripes
ENSTSYG00000025721	-	98	68.590	ENSTBEG00000013022	-	100	75.641	Tupaia_belangeri
ENSTSYG00000025721	-	88	61.972	ENSTBEG00000016759	-	79	58.451	Tupaia_belangeri
ENSTSYG00000025721	-	98	67.114	ENSTBEG00000015356	-	100	65.101	Tupaia_belangeri
ENSTSYG00000025721	-	100	72.327	ENSTTRG00000007827	SNRPC	86	82.166	Tursiops_truncatus
ENSTSYG00000025721	-	60	75.000	ENSUAMG00000014125	SNRPC	65	81.250	Ursus_americanus
ENSTSYG00000025721	-	100	55.435	ENSUMAG00000010869	SNRPC	100	62.360	Ursus_maritimus
ENSTSYG00000025721	-	88	49.296	ENSVPAG00000003106	SNRPC	79	57.042	Vicugna_pacos
ENSTSYG00000025721	-	96	70.130	ENSVVUG00000010467	-	87	79.487	Vulpes_vulpes
ENSTSYG00000025721	-	100	74.843	ENSVVUG00000021947	-	100	81.761	Vulpes_vulpes
ENSTSYG00000025721	-	100	68.553	ENSXETG00000024721	snrpc	100	74.843	Xenopus_tropicalis