EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000025878 (Gene tree)
Gene ID: 103255789
Gene Symbol: -
Alias: CCDC101|FLJ32446|TDRD29
Full Name: SAGA-associated factor 29
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Plus strand
Length: 15734 bases
Position: chrKE935857.1:4688-20421
Accession: 103255789
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000015123	DUF1325	PF07039.11	1.8e-40	1	1
ENSTSYP00000018451	DUF1325	PF07039.11	3.1e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000037069	-	738	-	ENSTSYP00000015123	245 (aa)	-	UPI000C2F6004
ENSTSYT00000028272	-	1097	XM_008053743	ENSTSYP00000018451	293 (aa)	XP_008051934	A0A1U7SVQ4

Gene Model

Click here to download ENSTSYG00000025878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000025878's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000025878	-	99	93.281	ENSTSYG00000003314	-	97	97.561

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000025878	-	100	99.317	ENSG00000176476	SGF29	100	99.317	Homo_sapiens
ENSTSYG00000025878	-	99	92.069	ENSAPOG00000007072	sgf29	100	92.069	Acanthochromis_polyacanthus
ENSTSYG00000025878	-	100	96.928	ENSAMEG00000015388	SGF29	100	96.928	Ailuropoda_melanoleuca
ENSTSYG00000025878	-	98	90.123	ENSACIG00000024432	sgf29	100	91.165	Amphilophus_citrinellus
ENSTSYG00000025878	-	99	92.069	ENSAOCG00000013494	sgf29	100	92.069	Amphiprion_ocellaris
ENSTSYG00000025878	-	86	91.270	ENSAPEG00000007284	sgf29	93	91.270	Amphiprion_percula
ENSTSYG00000025878	-	99	92.069	ENSATEG00000017566	sgf29	100	92.069	Anabas_testudineus
ENSTSYG00000025878	-	100	96.928	ENSACAG00000006595	SGF29	100	96.928	Anolis_carolinensis
ENSTSYG00000025878	-	99	84.589	ENSANAG00000023337	-	93	84.589	Aotus_nancymaae
ENSTSYG00000025878	-	100	99.317	ENSANAG00000037641	-	100	99.317	Aotus_nancymaae
ENSTSYG00000025878	-	96	85.356	ENSANAG00000032813	-	96	86.475	Aotus_nancymaae
ENSTSYG00000025878	-	99	90.690	ENSACLG00000016730	sgf29	100	90.690	Astatotilapia_calliptera
ENSTSYG00000025878	-	100	90.970	ENSAMXG00000003395	sgf29	100	90.970	Astyanax_mexicanus
ENSTSYG00000025878	-	100	99.659	ENSBTAG00000016883	SGF29	100	99.659	Bos_taurus
ENSTSYG00000025878	-	91	37.991	WBGene00021205	Y17G9B.8	89	37.991	Caenorhabditis_elegans
ENSTSYG00000025878	-	100	99.317	ENSCJAG00000006577	SGF29	100	99.317	Callithrix_jacchus
ENSTSYG00000025878	-	96	99.645	ENSCAFG00000017127	SGF29	92	99.645	Canis_familiaris
ENSTSYG00000025878	-	96	99.645	ENSCAFG00020017597	SGF29	92	99.645	Canis_lupus_dingo
ENSTSYG00000025878	-	100	99.659	ENSCHIG00000015325	SGF29	100	99.659	Capra_hircus
ENSTSYG00000025878	-	87	83.258	ENSCAPG00000000732	SGF29	96	86.640	Cavia_aperea
ENSTSYG00000025878	-	100	98.635	ENSCPOG00000027037	SGF29	100	98.635	Cavia_porcellus
ENSTSYG00000025878	-	100	99.317	ENSCCAG00000027359	-	100	99.317	Cebus_capucinus
ENSTSYG00000025878	-	99	74.658	ENSCCAG00000027313	-	66	74.658	Cebus_capucinus
ENSTSYG00000025878	-	100	99.317	ENSCATG00000034020	SGF29	100	99.317	Cercocebus_atys
ENSTSYG00000025878	-	100	99.317	ENSCLAG00000011510	SGF29	100	99.317	Chinchilla_lanigera
ENSTSYG00000025878	-	100	93.311	ENSCSAG00000006259	SGF29	100	93.311	Chlorocebus_sabaeus
ENSTSYG00000025878	-	87	65.098	ENSCHOG00000013831	-	100	65.098	Choloepus_hoffmanni
ENSTSYG00000025878	-	100	98.294	ENSCPBG00000012638	SGF29	85	98.294	Chrysemys_picta_bellii
ENSTSYG00000025878	-	99	61.938	ENSCING00000012953	-	99	61.938	Ciona_intestinalis
ENSTSYG00000025878	-	72	57.143	ENSCSAVG00000007328	-	87	57.143	Ciona_savignyi
ENSTSYG00000025878	-	85	98.795	ENSCANG00000039654	SGF29	100	98.795	Colobus_angolensis_palliatus
ENSTSYG00000025878	-	100	99.659	ENSCGRG00001016730	-	100	99.659	Cricetulus_griseus_chok1gshd
ENSTSYG00000025878	-	100	94.218	ENSCGRG00001014941	-	100	94.218	Cricetulus_griseus_chok1gshd
ENSTSYG00000025878	-	100	99.317	ENSCGRG00000003808	Sgf29	100	99.317	Cricetulus_griseus_crigri
ENSTSYG00000025878	-	97	90.041	ENSCSEG00000010575	sgf29	86	90.909	Cynoglossus_semilaevis
ENSTSYG00000025878	-	99	92.069	ENSCVAG00000014381	sgf29	100	92.069	Cyprinodon_variegatus
ENSTSYG00000025878	-	100	91.809	ENSDARG00000002339	sgf29	100	91.809	Danio_rerio
ENSTSYG00000025878	-	100	99.659	ENSDNOG00000048338	SGF29	99	99.659	Dasypus_novemcinctus
ENSTSYG00000025878	-	100	99.317	ENSDORG00000007002	Sgf29	100	99.317	Dipodomys_ordii
ENSTSYG00000025878	-	94	54.468	FBgn0050390	Sgf29	94	49.306	Drosophila_melanogaster
ENSTSYG00000025878	-	99	80.137	ENSEBUG00000008631	sgf29	98	80.137	Eptatretus_burgeri
ENSTSYG00000025878	-	98	97.531	ENSEASG00005014751	SGF29	91	99.628	Equus_asinus_asinus
ENSTSYG00000025878	-	100	99.659	ENSECAG00000011445	SGF29	95	99.659	Equus_caballus
ENSTSYG00000025878	-	98	97.531	ENSEEUG00000008521	SGF29	100	99.627	Erinaceus_europaeus
ENSTSYG00000025878	-	99	92.069	ENSELUG00000023888	sgf29	100	92.069	Esox_lucius
ENSTSYG00000025878	-	100	99.659	ENSFCAG00000012297	SGF29	100	99.659	Felis_catus
ENSTSYG00000025878	-	100	98.976	ENSFDAG00000012928	SGF29	100	98.976	Fukomys_damarensis
ENSTSYG00000025878	-	86	91.270	ENSFHEG00000022427	sgf29	93	91.270	Fundulus_heteroclitus
ENSTSYG00000025878	-	99	90.034	ENSGMOG00000000328	sgf29	100	90.034	Gadus_morhua
ENSTSYG00000025878	-	100	94.539	ENSGALG00000020590	SGF29	100	94.539	Gallus_gallus
ENSTSYG00000025878	-	99	92.069	ENSGAFG00000020626	sgf29	100	92.069	Gambusia_affinis
ENSTSYG00000025878	-	99	88.966	ENSGACG00000015001	sgf29	100	88.966	Gasterosteus_aculeatus
ENSTSYG00000025878	-	100	97.952	ENSGAGG00000012655	SGF29	100	97.952	Gopherus_agassizii
ENSTSYG00000025878	-	100	98.635	ENSGGOG00000000807	-	100	98.635	Gorilla_gorilla
ENSTSYG00000025878	-	89	77.778	ENSHBUG00000013677	sgf29	91	78.667	Haplochromis_burtoni
ENSTSYG00000025878	-	100	99.317	ENSHGLG00000014468	SGF29	100	99.317	Heterocephalus_glaber_female
ENSTSYG00000025878	-	100	99.317	ENSHGLG00100000132	SGF29	100	99.317	Heterocephalus_glaber_male
ENSTSYG00000025878	-	99	92.069	ENSHCOG00000002018	sgf29	100	92.069	Hippocampus_comes
ENSTSYG00000025878	-	100	92.150	ENSIPUG00000001851	sgf29	100	92.150	Ictalurus_punctatus
ENSTSYG00000025878	-	100	99.659	ENSSTOG00000013258	SGF29	100	99.659	Ictidomys_tridecemlineatus
ENSTSYG00000025878	-	100	99.659	ENSJJAG00000009013	Sgf29	100	99.659	Jaculus_jaculus
ENSTSYG00000025878	-	99	90.000	ENSKMAG00000004341	sgf29	99	90.000	Kryptolebias_marmoratus
ENSTSYG00000025878	-	97	91.286	ENSLBEG00000006754	sgf29	100	91.200	Labrus_bergylta
ENSTSYG00000025878	-	98	80.658	ENSLACG00000005336	SGF29	99	81.070	Latimeria_chalumnae
ENSTSYG00000025878	-	100	99.659	ENSLAFG00000028439	SGF29	100	99.659	Loxodonta_africana
ENSTSYG00000025878	-	100	99.317	ENSMFAG00000038040	SGF29	100	99.317	Macaca_fascicularis
ENSTSYG00000025878	-	100	99.317	ENSMMUG00000011370	SGF29	100	99.317	Macaca_mulatta
ENSTSYG00000025878	-	100	98.976	ENSMNEG00000043534	SGF29	100	98.976	Macaca_nemestrina
ENSTSYG00000025878	-	100	99.317	ENSMLEG00000031039	SGF29	100	99.317	Mandrillus_leucophaeus
ENSTSYG00000025878	-	99	91.724	ENSMAMG00000017907	sgf29	100	91.724	Mastacembelus_armatus
ENSTSYG00000025878	-	99	90.690	ENSMZEG00005001194	sgf29	100	90.690	Maylandia_zebra
ENSTSYG00000025878	-	99	90.690	ENSMZEG00005002947	sgf29	100	90.690	Maylandia_zebra
ENSTSYG00000025878	-	100	94.539	ENSMGAG00000012201	SGF29	100	94.539	Meleagris_gallopavo
ENSTSYG00000025878	-	100	99.659	ENSMAUG00000011063	Sgf29	100	99.659	Mesocricetus_auratus
ENSTSYG00000025878	-	100	100.000	ENSMICG00000009973	SGF29	100	100.000	Microcebus_murinus
ENSTSYG00000025878	-	100	99.659	ENSMOCG00000021358	Sgf29	100	99.659	Microtus_ochrogaster
ENSTSYG00000025878	-	97	92.437	ENSMMOG00000012706	sgf29	100	89.328	Mola_mola
ENSTSYG00000025878	-	100	97.611	ENSMODG00000015642	SGF29	100	97.611	Monodelphis_domestica
ENSTSYG00000025878	-	99	92.069	ENSMALG00000000231	sgf29	96	92.069	Monopterus_albus
ENSTSYG00000025878	-	100	98.976	MGP_CAROLIEiJ_G0030456	Sgf29	100	98.976	Mus_caroli
ENSTSYG00000025878	-	100	98.976	ENSMUSG00000030714	Sgf29	100	98.976	Mus_musculus
ENSTSYG00000025878	-	100	98.976	MGP_PahariEiJ_G0013666	Sgf29	100	98.976	Mus_pahari
ENSTSYG00000025878	-	100	98.976	MGP_SPRETEiJ_G0031570	Sgf29	100	98.976	Mus_spretus
ENSTSYG00000025878	-	100	99.659	ENSMPUG00000012669	SGF29	100	99.659	Mustela_putorius_furo
ENSTSYG00000025878	-	100	99.659	ENSMLUG00000022554	SGF29	100	99.659	Myotis_lucifugus
ENSTSYG00000025878	-	100	99.317	ENSNGAG00000022634	Sgf29	100	99.317	Nannospalax_galili
ENSTSYG00000025878	-	98	89.712	ENSNBRG00000020775	sgf29	100	90.763	Neolamprologus_brichardi
ENSTSYG00000025878	-	99	89.041	ENSNLEG00000001604	SGF29	99	89.041	Nomascus_leucogenys
ENSTSYG00000025878	-	76	98.649	ENSMEUG00000006221	SGF29	76	98.649	Notamacropus_eugenii
ENSTSYG00000025878	-	100	99.317	ENSOPRG00000009316	SGF29	100	99.317	Ochotona_princeps
ENSTSYG00000025878	-	100	98.635	ENSODEG00000013702	SGF29	100	98.635	Octodon_degus
ENSTSYG00000025878	-	99	90.722	ENSONIG00000009377	sgf29	100	90.722	Oreochromis_niloticus
ENSTSYG00000025878	-	79	96.465	ENSOANG00000009696	SGF29	100	98.485	Ornithorhynchus_anatinus
ENSTSYG00000025878	-	98	97.531	ENSOCUG00000025361	-	100	99.259	Oryctolagus_cuniculus
ENSTSYG00000025878	-	97	78.571	ENSOCUG00000021684	-	99	78.571	Oryctolagus_cuniculus
ENSTSYG00000025878	-	99	91.034	ENSORLG00000027873	sgf29	100	91.034	Oryzias_latipes
ENSTSYG00000025878	-	99	91.034	ENSORLG00020020976	-	100	91.034	Oryzias_latipes_hni
ENSTSYG00000025878	-	99	91.034	ENSORLG00015011795	sgf29	100	91.034	Oryzias_latipes_hsok
ENSTSYG00000025878	-	99	91.034	ENSOMEG00000020118	sgf29	100	91.034	Oryzias_melastigma
ENSTSYG00000025878	-	98	98.354	ENSOGAG00000015794	-	100	92.833	Otolemur_garnettii
ENSTSYG00000025878	-	100	65.986	ENSOGAG00000034571	-	100	65.986	Otolemur_garnettii
ENSTSYG00000025878	-	100	99.659	ENSOARG00000003226	SGF29	100	99.659	Ovis_aries
ENSTSYG00000025878	-	98	98.745	ENSPPAG00000039380	SGF29	99	98.745	Pan_paniscus
ENSTSYG00000025878	-	100	99.659	ENSPPRG00000006831	SGF29	100	99.659	Panthera_pardus
ENSTSYG00000025878	-	100	99.659	ENSPTIG00000014381	SGF29	100	99.659	Panthera_tigris_altaica
ENSTSYG00000025878	-	100	74.403	ENSPTRG00000007925	SGF29	100	74.247	Pan_troglodytes
ENSTSYG00000025878	-	100	99.317	ENSPANG00000019684	SGF29	100	99.317	Papio_anubis
ENSTSYG00000025878	-	99	92.308	ENSPKIG00000018503	sgf29	100	88.396	Paramormyrops_kingsleyae
ENSTSYG00000025878	-	99	91.498	ENSPMGG00000006683	sgf29	99	85.862	Periophthalmus_magnuspinnatus
ENSTSYG00000025878	-	100	97.952	ENSPCIG00000025200	SGF29	100	97.952	Phascolarctos_cinereus
ENSTSYG00000025878	-	99	92.414	ENSPFOG00000010035	sgf29	99	92.414	Poecilia_formosa
ENSTSYG00000025878	-	99	92.414	ENSPLAG00000000559	sgf29	100	92.414	Poecilia_latipinna
ENSTSYG00000025878	-	99	92.414	ENSPMEG00000007026	sgf29	100	92.414	Poecilia_mexicana
ENSTSYG00000025878	-	99	92.759	ENSPREG00000011868	sgf29	100	92.759	Poecilia_reticulata
ENSTSYG00000025878	-	100	99.317	ENSPPYG00000007233	SGF29	100	99.317	Pongo_abelii
ENSTSYG00000025878	-	100	100.000	ENSPCOG00000028233	SGF29	100	100.000	Propithecus_coquereli
ENSTSYG00000025878	-	98	89.712	ENSPNYG00000012353	sgf29	100	90.763	Pundamilia_nyererei
ENSTSYG00000025878	-	98	91.358	ENSPNAG00000014651	sgf29	100	92.369	Pygocentrus_nattereri
ENSTSYG00000025878	-	100	99.317	ENSRNOG00000019245	Sgf29	100	99.317	Rattus_norvegicus
ENSTSYG00000025878	-	100	99.317	ENSRBIG00000041003	SGF29	100	99.317	Rhinopithecus_bieti
ENSTSYG00000025878	-	100	99.317	ENSRROG00000044894	SGF29	100	99.317	Rhinopithecus_roxellana
ENSTSYG00000025878	-	99	98.354	ENSSBOG00000008004	SGF29	100	99.197	Saimiri_boliviensis_boliviensis
ENSTSYG00000025878	-	100	97.952	ENSSHAG00000011279	-	100	97.952	Sarcophilus_harrisii
ENSTSYG00000025878	-	89	65.022	ENSSHAG00000002930	-	100	66.667	Sarcophilus_harrisii
ENSTSYG00000025878	-	100	88.055	ENSSFOG00015001254	sgf29	100	88.055	Scleropages_formosus
ENSTSYG00000025878	-	99	92.414	ENSSMAG00000016613	sgf29	100	92.414	Scophthalmus_maximus
ENSTSYG00000025878	-	99	92.069	ENSSDUG00000005977	sgf29	100	92.069	Seriola_dumerili
ENSTSYG00000025878	-	99	92.069	ENSSLDG00000012446	sgf29	100	92.069	Seriola_lalandi_dorsalis
ENSTSYG00000025878	-	100	97.952	ENSSPUG00000010121	SGF29	100	97.952	Sphenodon_punctatus
ENSTSYG00000025878	-	99	92.069	ENSSPAG00000018994	sgf29	100	92.069	Stegastes_partitus
ENSTSYG00000025878	-	100	99.659	ENSSSCG00000022778	SGF29	100	99.659	Sus_scrofa
ENSTSYG00000025878	-	98	90.574	ENSTNIG00000006496	SGF29	100	91.489	Tetraodon_nigroviridis
ENSTSYG00000025878	-	99	91.724	ENSTNIG00000001984	sgf29	99	91.724	Tetraodon_nigroviridis
ENSTSYG00000025878	-	98	97.531	ENSUAMG00000010172	SGF29	85	99.628	Ursus_americanus
ENSTSYG00000025878	-	93	97.414	ENSUMAG00000010966	SGF29	79	98.837	Ursus_maritimus
ENSTSYG00000025878	-	100	96.246	ENSXETG00000033185	sgf29	100	96.246	Xenopus_tropicalis
ENSTSYG00000025878	-	99	92.096	ENSXCOG00000011501	sgf29	100	92.096	Xiphophorus_couchianus
ENSTSYG00000025878	-	99	92.414	ENSXMAG00000010932	sgf29	100	92.414	Xiphophorus_maculatus