EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTSYG00000026530 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
U6 snRNA-associated Sm-like protein LSm5 pseudogene
Gene Type
protein_coding
Species
Carlito_syrichta
Status
putative
Strand
Minus strand
Length
300 bases
Position
chrKE935890.1:98785-99084
Accession
103255852
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTSYP00000030270LSMPF01423.222.4e-1311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTSYT00000028927-279-ENSTSYP0000003027092 (aa)-UPI000C2F63A2
Gene Model
Click here to download ENSTSYG00000026530's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000026530's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTSYG00000026530-9171.429ENSTSYG00000028728-10071.429
ENSTSYG00000026530-9159.341ENSTSYG00000036637-10059.341
ENSTSYG00000026530-9181.319ENSTSYG00000006449-10081.319
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTSYG00000026530-9181.319ENSG00000106355LSM510088.710Homo_sapiens
ENSTSYG00000026530-9178.022ENSAPOG00000020779LSM510078.022Acanthochromis_polyacanthus
ENSTSYG00000026530-8275.610ENSAPOG00000011743LSM510087.097Acanthochromis_polyacanthus
ENSTSYG00000026530-9181.319ENSAMEG00000006700LSM510081.319Ailuropoda_melanoleuca
ENSTSYG00000026530-9178.022ENSAOCG00000001636lsm510078.022Amphiprion_ocellaris
ENSTSYG00000026530-9178.022ENSAPEG00000008151lsm510078.022Amphiprion_percula
ENSTSYG00000026530-6787.097ENSAPEG00000008201lsm510087.097Amphiprion_percula
ENSTSYG00000026530-8274.390ENSATEG00000020470lsm510058.333Anabas_testudineus
ENSTSYG00000026530-7287.879ENSAPLG00000008171LSM58987.879Anas_platyrhynchos
ENSTSYG00000026530-5373.214ENSACAG00000009530LSM59373.214Anolis_carolinensis
ENSTSYG00000026530-9180.220ENSANAG00000034409-10080.220Aotus_nancymaae
ENSTSYG00000026530-9076.667ENSANAG00000024192-9476.667Aotus_nancymaae
ENSTSYG00000026530-9178.571ENSANAG00000037758-10078.571Aotus_nancymaae
ENSTSYG00000026530-8777.011ENSACLG00000012891lsm59977.011Astatotilapia_calliptera
ENSTSYG00000026530-9167.021ENSAMXG00000035543lsm510067.021Astyanax_mexicanus
ENSTSYG00000026530-9181.319ENSBTAG00000002332LSM510081.319Bos_taurus
ENSTSYG00000026530-9160.440WBGene00003079lsm-510060.440Caenorhabditis_elegans
ENSTSYG00000026530-9068.889ENSCJAG00000005678-10068.889Callithrix_jacchus
ENSTSYG00000026530-9181.319ENSCJAG00000047379LSM58165.385Callithrix_jacchus
ENSTSYG00000026530-9180.220ENSCAFG00000019261-10080.220Canis_familiaris
ENSTSYG00000026530-9181.319ENSCAFG00020004946LSM510081.319Canis_lupus_dingo
ENSTSYG00000026530-7360.811ENSCHIG00000021428-9560.227Capra_hircus
ENSTSYG00000026530-9179.121ENSCHIG00000004079-10079.121Capra_hircus
ENSTSYG00000026530-9181.319ENSCHIG00000024539LSM510081.319Capra_hircus
ENSTSYG00000026530-7479.412ENSCAPG00000006980LSM59179.412Cavia_aperea
ENSTSYG00000026530-9181.319ENSCPOG00000036386LSM510081.319Cavia_porcellus
ENSTSYG00000026530-9179.121ENSCCAG00000032123-10079.121Cebus_capucinus
ENSTSYG00000026530-9181.319ENSCCAG00000037808-10081.319Cebus_capucinus
ENSTSYG00000026530-9179.762ENSCCAG00000032792-10079.762Cebus_capucinus
ENSTSYG00000026530-9180.220ENSCCAG00000000821-10080.220Cebus_capucinus
ENSTSYG00000026530-9165.476ENSCCAG00000037334-10065.476Cebus_capucinus
ENSTSYG00000026530-9181.319ENSCATG00000040218LSM510088.710Cercocebus_atys
ENSTSYG00000026530-9071.111ENSCATG00000014790-10071.111Cercocebus_atys
ENSTSYG00000026530-9766.667ENSCLAG00000005062-9566.667Chinchilla_lanigera
ENSTSYG00000026530-9181.319ENSCLAG00000000202LSM510081.319Chinchilla_lanigera
ENSTSYG00000026530-7478.667ENSCHOG00000005335LSM59978.667Choloepus_hoffmanni
ENSTSYG00000026530-9181.319ENSCPBG00000013685LSM510081.319Chrysemys_picta_bellii
ENSTSYG00000026530-8971.910ENSCING00000020625-9971.910Ciona_intestinalis
ENSTSYG00000026530-8670.930ENSCSAVG00000001439-9870.930Ciona_savignyi
ENSTSYG00000026530-9181.319ENSCANG00000039909LSM510088.710Colobus_angolensis_palliatus
ENSTSYG00000026530-9181.319ENSCGRG00001015461Lsm510081.319Cricetulus_griseus_chok1gshd
ENSTSYG00000026530-7488.235ENSCGRG00000007677Lsm59188.235Cricetulus_griseus_crigri
ENSTSYG00000026530-9158.333ENSCSEG00000015286lsm510058.333Cynoglossus_semilaevis
ENSTSYG00000026530-9176.923ENSCVAG00000004262lsm510076.923Cyprinodon_variegatus
ENSTSYG00000026530-9178.022ENSDARG00000071573lsm510088.710Danio_rerio
ENSTSYG00000026530-8772.414ENSDNOG00000049495-9672.414Dasypus_novemcinctus
ENSTSYG00000026530-9181.319ENSDNOG00000034958LSM510081.319Dasypus_novemcinctus
ENSTSYG00000026530-9181.319ENSDORG00000009422Lsm510081.319Dipodomys_ordii
ENSTSYG00000026530-8370.513FBgn0035675CG66108670.513Drosophila_melanogaster
ENSTSYG00000026530-7668.571ENSETEG00000016074-9268.571Echinops_telfairi
ENSTSYG00000026530-9164.444ENSETEG00000010651-10064.444Echinops_telfairi
ENSTSYG00000026530-8960.674ENSETEG00000000777-9964.286Echinops_telfairi
ENSTSYG00000026530-9058.889ENSETEG00000001469-9958.889Echinops_telfairi
ENSTSYG00000026530-9181.319ENSETEG00000018068LSM510081.319Echinops_telfairi
ENSTSYG00000026530-9174.725ENSEBUG00000008540lsm510074.725Eptatretus_burgeri
ENSTSYG00000026530-9181.319ENSEASG00005003500LSM510081.319Equus_asinus_asinus
ENSTSYG00000026530-9168.132ENSECAG00000018445LSM510068.132Equus_caballus
ENSTSYG00000026530-6285.965ENSEEUG00000004102LSM59585.965Erinaceus_europaeus
ENSTSYG00000026530-9178.022ENSELUG00000007792lsm510078.022Esox_lucius
ENSTSYG00000026530-9181.319ENSFCAG00000000230LSM510081.319Felis_catus
ENSTSYG00000026530-7488.235ENSFALG00000001892LSM58288.235Ficedula_albicollis
ENSTSYG00000026530-9181.319ENSFDAG00000008767LSM510081.319Fukomys_damarensis
ENSTSYG00000026530-9156.977ENSFDAG00000008685-10056.977Fukomys_damarensis
ENSTSYG00000026530-9062.921ENSFHEG00000004011lsm59662.921Fundulus_heteroclitus
ENSTSYG00000026530-9076.667ENSGMOG00000018235lsm510076.667Gadus_morhua
ENSTSYG00000026530-9180.220ENSGALG00000041625LSM510080.220Gallus_gallus
ENSTSYG00000026530-6787.097ENSGAFG00000016824lsm510087.097Gambusia_affinis
ENSTSYG00000026530-9178.022ENSGACG00000005528lsm510078.022Gasterosteus_aculeatus
ENSTSYG00000026530-9181.319ENSGAGG00000015593LSM510081.319Gopherus_agassizii
ENSTSYG00000026530-9181.319ENSGGOG00000043469LSM510081.319Gorilla_gorilla
ENSTSYG00000026530-8777.011ENSHBUG00000013773lsm59977.011Haplochromis_burtoni
ENSTSYG00000026530-9181.319ENSHGLG00000011765LSM510081.319Heterocephalus_glaber_female
ENSTSYG00000026530-9179.775ENSHGLG00100015610LSM510079.775Heterocephalus_glaber_male
ENSTSYG00000026530-9158.333ENSHCOG00000008288lsm510058.333Hippocampus_comes
ENSTSYG00000026530-9176.923ENSIPUG00000021095LSM510076.923Ictalurus_punctatus
ENSTSYG00000026530-8469.620ENSSTOG00000033886-8969.620Ictidomys_tridecemlineatus
ENSTSYG00000026530-9181.319ENSSTOG00000012662LSM510081.319Ictidomys_tridecemlineatus
ENSTSYG00000026530-7776.923ENSJJAG00000004475-9976.923Jaculus_jaculus
ENSTSYG00000026530-9179.121ENSJJAG00000012145-10079.121Jaculus_jaculus
ENSTSYG00000026530-9767.416ENSJJAG00000016144-9967.416Jaculus_jaculus
ENSTSYG00000026530-9176.923ENSKMAG00000021861lsm510076.923Kryptolebias_marmoratus
ENSTSYG00000026530-9169.231ENSLBEG00000009235LSM57069.231Labrus_bergylta
ENSTSYG00000026530-5357.143ENSLBEG00000017379lsm59257.143Labrus_bergylta
ENSTSYG00000026530-9179.121ENSLACG00000022448LSM510079.121Latimeria_chalumnae
ENSTSYG00000026530-9178.022ENSLOCG00000012903lsm510078.022Lepisosteus_oculatus
ENSTSYG00000026530-9181.319ENSLAFG00000029579LSM510081.319Loxodonta_africana
ENSTSYG00000026530-9165.476ENSLAFG00000027938-10065.476Loxodonta_africana
ENSTSYG00000026530-9181.319ENSMFAG00000038508LSM510081.319Macaca_fascicularis
ENSTSYG00000026530-9179.121ENSMFAG00000030152-10079.121Macaca_fascicularis
ENSTSYG00000026530-9179.121ENSMMUG00000030131-10079.121Macaca_mulatta
ENSTSYG00000026530-9072.222ENSMMUG00000039822-10072.222Macaca_mulatta
ENSTSYG00000026530-9179.121ENSMNEG00000037935-10079.121Macaca_nemestrina
ENSTSYG00000026530-9181.319ENSMNEG00000015331LSM510088.710Macaca_nemestrina
ENSTSYG00000026530-8970.787ENSMLEG00000034037-10070.787Mandrillus_leucophaeus
ENSTSYG00000026530-9181.319ENSMLEG00000024945LSM510081.319Mandrillus_leucophaeus
ENSTSYG00000026530-9175.824ENSMAMG00000012869lsm510075.824Mastacembelus_armatus
ENSTSYG00000026530-8777.011ENSMZEG00005019554lsm59977.011Maylandia_zebra
ENSTSYG00000026530-9180.220ENSMGAG00000012117LSM510080.220Meleagris_gallopavo
ENSTSYG00000026530-9181.319ENSMAUG00000012222Lsm510081.319Mesocricetus_auratus
ENSTSYG00000026530-9181.319ENSMAUG00000008132-10081.319Mesocricetus_auratus
ENSTSYG00000026530-9181.319ENSMICG00000005353LSM510081.319Microcebus_murinus
ENSTSYG00000026530-9077.108ENSMICG00000033928-9677.108Microcebus_murinus
ENSTSYG00000026530-9181.319ENSMOCG00000012018Lsm510081.319Microtus_ochrogaster
ENSTSYG00000026530-7486.765ENSMMOG00000004026lsm57886.765Mola_mola
ENSTSYG00000026530-6788.710ENSMODG00000013274-10088.710Monodelphis_domestica
ENSTSYG00000026530-6785.484ENSMALG00000010343lsm510085.484Monopterus_albus
ENSTSYG00000026530-9181.319MGP_CAROLIEiJ_G0028421Lsm510081.319Mus_caroli
ENSTSYG00000026530-9181.319ENSMUSG00000091625Lsm510081.319Mus_musculus
ENSTSYG00000026530-9181.319MGP_PahariEiJ_G0022171Lsm510081.319Mus_pahari
ENSTSYG00000026530-9181.319MGP_SPRETEiJ_G0029423Lsm510081.319Mus_spretus
ENSTSYG00000026530-9181.319ENSMLUG00000017028LSM510081.319Myotis_lucifugus
ENSTSYG00000026530-9181.319ENSNGAG00000024142Lsm510081.319Nannospalax_galili
ENSTSYG00000026530-9067.778ENSNGAG00000022569-9667.778Nannospalax_galili
ENSTSYG00000026530-9172.043ENSNGAG00000017707-10072.043Nannospalax_galili
ENSTSYG00000026530-8371.053ENSNBRG00000011386lsm59371.053Neolamprologus_brichardi
ENSTSYG00000026530-9181.319ENSNLEG00000015268LSM510081.319Nomascus_leucogenys
ENSTSYG00000026530-7488.235ENSOPRG00000002443LSM59188.235Ochotona_princeps
ENSTSYG00000026530-9181.319ENSODEG00000008258-10081.319Octodon_degus
ENSTSYG00000026530-9181.319ENSODEG00000019072-10081.319Octodon_degus
ENSTSYG00000026530-7850.000ENSOANG00000014540-9950.000Ornithorhynchus_anatinus
ENSTSYG00000026530-9181.319ENSOCUG00000029043LSM510081.319Oryctolagus_cuniculus
ENSTSYG00000026530-9175.824ENSORLG00000027725lsm55875.824Oryzias_latipes
ENSTSYG00000026530-8772.414ENSORLG00020003019lsm58672.414Oryzias_latipes_hni
ENSTSYG00000026530-9175.824ENSORLG00015003338lsm510075.824Oryzias_latipes_hsok
ENSTSYG00000026530-9174.725ENSOMEG00000001078lsm510074.725Oryzias_melastigma
ENSTSYG00000026530-9181.319ENSOGAG00000013892LSM510081.319Otolemur_garnettii
ENSTSYG00000026530-9181.319ENSOARG00000006944LSM510081.319Ovis_aries
ENSTSYG00000026530-9181.319ENSPPAG00000003697-10081.319Pan_paniscus
ENSTSYG00000026530-9181.319ENSPPRG00000002550LSM510081.319Panthera_pardus
ENSTSYG00000026530-9181.319ENSPTIG00000015604LSM510081.319Panthera_tigris_altaica
ENSTSYG00000026530-9181.319ENSPTRG00000019057LSM510081.319Pan_troglodytes
ENSTSYG00000026530-9165.934ENSPTRG00000049488-10068.132Pan_troglodytes
ENSTSYG00000026530-9181.319ENSPANG00000032179-10081.319Papio_anubis
ENSTSYG00000026530-9179.121ENSPANG00000033477-10079.121Papio_anubis
ENSTSYG00000026530-9072.222ENSPANG00000032538-10072.222Papio_anubis
ENSTSYG00000026530-9178.022ENSPKIG00000011910lsm510078.022Paramormyrops_kingsleyae
ENSTSYG00000026530-7287.879ENSPSIG00000014796LSM58987.879Pelodiscus_sinensis
ENSTSYG00000026530-6787.097ENSPMGG00000011699lsm510087.097Periophthalmus_magnuspinnatus
ENSTSYG00000026530-9160.440ENSPEMG00000022375-10060.440Peromyscus_maniculatus_bairdii
ENSTSYG00000026530-9176.923ENSPFOG00000001433lsm510076.923Poecilia_formosa
ENSTSYG00000026530-9176.923ENSPLAG00000009665lsm510076.923Poecilia_latipinna
ENSTSYG00000026530-9176.923ENSPMEG00000022265lsm510076.923Poecilia_mexicana
ENSTSYG00000026530-6787.097ENSPREG00000022452lsm510087.097Poecilia_reticulata
ENSTSYG00000026530-9178.022ENSPPYG00000017661LSM510078.022Pongo_abelii
ENSTSYG00000026530-8079.012ENSPCAG00000013740LSM510079.012Procavia_capensis
ENSTSYG00000026530-9181.319ENSPVAG00000009786LSM510081.319Pteropus_vampyrus
ENSTSYG00000026530-8777.011ENSPNYG00000022236lsm59977.011Pundamilia_nyererei
ENSTSYG00000026530-9176.923ENSPNAG00000001887lsm510076.923Pygocentrus_nattereri
ENSTSYG00000026530-9181.319ENSRNOG00000042126Lsm510081.319Rattus_norvegicus
ENSTSYG00000026530-9177.174ENSRNOG00000027305AABR07065089.110077.174Rattus_norvegicus
ENSTSYG00000026530-9181.319ENSRBIG00000030340-10081.319Rhinopithecus_bieti
ENSTSYG00000026530-9181.319ENSRBIG00000030714-10081.319Rhinopithecus_bieti
ENSTSYG00000026530-9181.319ENSRBIG00000027803-10088.710Rhinopithecus_bieti
ENSTSYG00000026530-9180.220ENSRBIG00000024431-10080.220Rhinopithecus_bieti
ENSTSYG00000026530-9181.319ENSRROG00000004655-10081.319Rhinopithecus_roxellana
ENSTSYG00000026530-9181.319ENSRROG00000042782-10088.710Rhinopithecus_roxellana
ENSTSYG00000026530-9181.319ENSRROG00000023884-10081.319Rhinopithecus_roxellana
ENSTSYG00000026530-7839.241YER146W-8539.241Saccharomyces_cerevisiae
ENSTSYG00000026530-9177.381ENSSBOG00000034794-10077.381Saimiri_boliviensis_boliviensis
ENSTSYG00000026530-9181.319ENSSBOG00000012312LSM510081.319Saimiri_boliviensis_boliviensis
ENSTSYG00000026530-9179.121ENSSBOG00000019124-10079.121Saimiri_boliviensis_boliviensis
ENSTSYG00000026530-9178.022ENSSFOG00015010099lsm510078.022Scleropages_formosus
ENSTSYG00000026530-9159.524ENSSMAG00000007895lsm510059.524Scophthalmus_maximus
ENSTSYG00000026530-6787.097ENSSDUG00000010762lsm510087.097Seriola_dumerili
ENSTSYG00000026530-7863.514ENSSLDG00000008014-8863.514Seriola_lalandi_dorsalis
ENSTSYG00000026530-9176.923ENSSLDG00000025242lsm510076.923Seriola_lalandi_dorsalis
ENSTSYG00000026530-9154.945ENSSARG00000003330LSM510054.945Sorex_araneus
ENSTSYG00000026530-9179.121ENSSPUG00000002690LSM510087.097Sphenodon_punctatus
ENSTSYG00000026530-9159.524ENSSPAG00000005435lsm510059.524Stegastes_partitus
ENSTSYG00000026530-9181.319ENSSSCG00000026064-10081.319Sus_scrofa
ENSTSYG00000026530-6769.565ENSSSCG00000029661-9672.464Sus_scrofa
ENSTSYG00000026530-9178.022ENSTGUG00000017539LSM510078.022Taeniopygia_guttata
ENSTSYG00000026530-7768.675ENSTRUG00000017749lsm56468.675Takifugu_rubripes
ENSTSYG00000026530-8777.011ENSTNIG00000008695lsm59977.011Tetraodon_nigroviridis
ENSTSYG00000026530-9181.319ENSTBEG00000004876LSM510081.319Tupaia_belangeri
ENSTSYG00000026530-9181.319ENSTTRG00000004237LSM510081.319Tursiops_truncatus
ENSTSYG00000026530-9378.495ENSUMAG00000002625LSM56778.495Ursus_maritimus
ENSTSYG00000026530-9181.319ENSVPAG00000009985LSM510081.319Vicugna_pacos
ENSTSYG00000026530-9181.319ENSVVUG00000021311LSM510081.319Vulpes_vulpes
ENSTSYG00000026530-8274.390ENSXETG00000026465lsm510074.390Xenopus_tropicalis
ENSTSYG00000026530-6787.097ENSXCOG00000015348lsm510087.097Xiphophorus_couchianus
ENSTSYG00000026530-9176.923ENSXMAG00000029988lsm510076.923Xiphophorus_maculatus

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