EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000027848 (Gene tree)
Gene ID: 103264668
Gene Symbol: PCBP1
Alias: -
Full Name: poly(rC) binding protein 1
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Minus strand
Length: 1071 bases
Position: chrKE941360.1:490894-491964
Accession: 103264668
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000031826	KH_1	PF00013.29	1.7e-51	1	3
ENSTSYP00000031826	KH_1	PF00013.29	1.7e-51	2	3
ENSTSYP00000031826	KH_1	PF00013.29	1.7e-51	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000034220	PCBP1-201	1071	XM_008062381	ENSTSYP00000031826	356 (aa)	XP_008060572	A0A1U7U5L4

Gene Model

Click here to download ENSTSYG00000027848's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000027848's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000027848	PCBP1	66	67.932	ENSTSYG00000005254	PCBP3	91	67.932
ENSTSYG00000027848	PCBP1	56	32.143	ENSTSYG00000003376	IGF2BP2	77	33.696
ENSTSYG00000027848	PCBP1	99	67.227	ENSTSYG00000028815	-	100	67.227
ENSTSYG00000027848	PCBP1	68	34.722	ENSTSYG00000011552	KHSRP	59	34.722
ENSTSYG00000027848	PCBP1	100	83.379	ENSTSYG00000009771	PCBP2	100	83.379
ENSTSYG00000027848	PCBP1	69	40.541	ENSTSYG00000014033	NOVA1	55	40.541
ENSTSYG00000027848	PCBP1	98	52.975	ENSTSYG00000008765	PCBP4	77	52.975

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000027848	PCBP1	100	99.438	ENSG00000169564	PCBP1	100	99.438	Homo_sapiens
ENSTSYG00000027848	PCBP1	100	96.629	ENSAMEG00000016094	PCBP1	100	96.629	Ailuropoda_melanoleuca
ENSTSYG00000027848	PCBP1	79	91.166	ENSANAG00000022494	-	100	91.166	Aotus_nancymaae
ENSTSYG00000027848	PCBP1	89	87.025	ENSANAG00000027108	-	100	87.025	Aotus_nancymaae
ENSTSYG00000027848	PCBP1	79	94.346	ENSANAG00000031745	-	100	94.346	Aotus_nancymaae
ENSTSYG00000027848	PCBP1	100	85.112	ENSANAG00000033377	-	100	85.112	Aotus_nancymaae
ENSTSYG00000027848	PCBP1	100	88.764	ENSANAG00000023938	-	100	88.764	Aotus_nancymaae
ENSTSYG00000027848	PCBP1	100	87.640	ENSANAG00000026077	-	100	87.640	Aotus_nancymaae
ENSTSYG00000027848	PCBP1	97	95.665	ENSANAG00000026989	-	99	95.665	Aotus_nancymaae
ENSTSYG00000027848	PCBP1	79	94.346	ENSANAG00000019364	-	100	94.346	Aotus_nancymaae
ENSTSYG00000027848	PCBP1	91	99.383	ENSBTAG00000008985	PCBP1	99	99.383	Bos_taurus
ENSTSYG00000027848	PCBP1	100	93.820	ENSCJAG00000038388	-	95	93.820	Callithrix_jacchus
ENSTSYG00000027848	PCBP1	100	99.157	ENSCAFG00000003326	PCBP1	100	99.157	Canis_familiaris
ENSTSYG00000027848	PCBP1	100	99.438	ENSCHIG00000007923	PCBP1	100	99.438	Capra_hircus
ENSTSYG00000027848	PCBP1	100	99.438	ENSCPOG00000013511	PCBP1	100	99.438	Cavia_porcellus
ENSTSYG00000027848	PCBP1	100	90.730	ENSCCAG00000029186	-	98	90.730	Cebus_capucinus
ENSTSYG00000027848	PCBP1	100	99.438	ENSCCAG00000019842	-	100	99.438	Cebus_capucinus
ENSTSYG00000027848	PCBP1	100	99.438	ENSCATG00000015029	PCBP1	100	99.438	Cercocebus_atys
ENSTSYG00000027848	PCBP1	100	98.876	ENSCLAG00000017909	PCBP1	100	98.876	Chinchilla_lanigera
ENSTSYG00000027848	PCBP1	100	99.438	ENSCSAG00000019441	PCBP1	100	99.438	Chlorocebus_sabaeus
ENSTSYG00000027848	PCBP1	100	99.438	ENSCANG00000018039	-	100	99.438	Colobus_angolensis_palliatus
ENSTSYG00000027848	PCBP1	100	89.607	ENSCANG00000032470	-	94	89.607	Colobus_angolensis_palliatus
ENSTSYG00000027848	PCBP1	72	84.314	ENSCANG00000033810	-	87	84.314	Colobus_angolensis_palliatus
ENSTSYG00000027848	PCBP1	100	99.438	ENSCGRG00001015078	Pcbp1	100	99.438	Cricetulus_griseus_chok1gshd
ENSTSYG00000027848	PCBP1	100	99.438	ENSCGRG00000018899	Pcbp1	100	99.438	Cricetulus_griseus_crigri
ENSTSYG00000027848	PCBP1	80	98.596	ENSDNOG00000036372	PCBP1	99	98.596	Dasypus_novemcinctus
ENSTSYG00000027848	PCBP1	100	99.438	ENSDORG00000008216	Pcbp1	100	99.438	Dipodomys_ordii
ENSTSYG00000027848	PCBP1	100	99.438	ENSFCAG00000022238	PCBP1	100	99.438	Felis_catus
ENSTSYG00000027848	PCBP1	100	99.157	ENSFDAG00000019637	PCBP1	100	99.157	Fukomys_damarensis
ENSTSYG00000027848	PCBP1	100	99.438	ENSGGOG00000028130	PCBP1	100	99.438	Gorilla_gorilla
ENSTSYG00000027848	PCBP1	100	97.191	ENSHGLG00000020243	-	100	97.191	Heterocephalus_glaber_female
ENSTSYG00000027848	PCBP1	100	99.157	ENSHGLG00000020345	Pcbp1	100	99.157	Heterocephalus_glaber_female
ENSTSYG00000027848	PCBP1	100	98.876	ENSHGLG00100019620	-	100	98.876	Heterocephalus_glaber_male
ENSTSYG00000027848	PCBP1	100	99.157	ENSHGLG00100019761	Pcbp1	100	99.157	Heterocephalus_glaber_male
ENSTSYG00000027848	PCBP1	100	99.438	ENSSTOG00000026002	PCBP1	100	99.438	Ictidomys_tridecemlineatus
ENSTSYG00000027848	PCBP1	100	99.438	ENSJJAG00000000737	Pcbp1	100	99.438	Jaculus_jaculus
ENSTSYG00000027848	PCBP1	95	87.834	ENSMFAG00000003400	PCBP1	100	87.834	Macaca_fascicularis
ENSTSYG00000027848	PCBP1	100	99.438	ENSMMUG00000038295	PCBP1	100	99.438	Macaca_mulatta
ENSTSYG00000027848	PCBP1	100	99.438	ENSMNEG00000002934	PCBP1	100	99.438	Macaca_nemestrina
ENSTSYG00000027848	PCBP1	100	99.438	ENSMLEG00000027389	PCBP1	100	99.438	Mandrillus_leucophaeus
ENSTSYG00000027848	PCBP1	100	99.157	ENSMAUG00000009843	Pcbp1	100	99.157	Mesocricetus_auratus
ENSTSYG00000027848	PCBP1	100	99.438	ENSMICG00000038221	PCBP1	100	99.438	Microcebus_murinus
ENSTSYG00000027848	PCBP1	100	99.438	ENSMOCG00000008102	Pcbp1	100	99.438	Microtus_ochrogaster
ENSTSYG00000027848	PCBP1	100	99.438	MGP_CAROLIEiJ_G0028598	Pcbp1	100	99.438	Mus_caroli
ENSTSYG00000027848	PCBP1	100	99.438	ENSMUSG00000051695	Pcbp1	100	99.438	Mus_musculus
ENSTSYG00000027848	PCBP1	100	99.438	MGP_PahariEiJ_G0022335	Pcbp1	100	99.438	Mus_pahari
ENSTSYG00000027848	PCBP1	100	99.438	MGP_SPRETEiJ_G0029609	Pcbp1	100	99.438	Mus_spretus
ENSTSYG00000027848	PCBP1	100	96.629	ENSMPUG00000007175	PCBP1	100	96.629	Mustela_putorius_furo
ENSTSYG00000027848	PCBP1	100	99.438	ENSMLUG00000014173	PCBP1	100	99.438	Myotis_lucifugus
ENSTSYG00000027848	PCBP1	100	99.438	ENSNGAG00000014909	-	100	99.438	Nannospalax_galili
ENSTSYG00000027848	PCBP1	100	99.438	ENSNGAG00000011957	-	100	99.438	Nannospalax_galili
ENSTSYG00000027848	PCBP1	100	99.438	ENSNLEG00000018722	PCBP1	100	99.438	Nomascus_leucogenys
ENSTSYG00000027848	PCBP1	100	82.865	ENSODEG00000000263	PCBP1	100	82.865	Octodon_degus
ENSTSYG00000027848	PCBP1	100	99.438	ENSOCUG00000003634	PCBP1	100	99.438	Oryctolagus_cuniculus
ENSTSYG00000027848	PCBP1	100	96.629	ENSOGAG00000028946	PCBP1	100	96.629	Otolemur_garnettii
ENSTSYG00000027848	PCBP1	100	99.438	ENSOARG00000019516	PCBP1	100	99.438	Ovis_aries
ENSTSYG00000027848	PCBP1	100	97.472	ENSPPAG00000036116	PCBP1	99	98.039	Pan_paniscus
ENSTSYG00000027848	PCBP1	100	99.438	ENSPPRG00000020533	PCBP1	100	99.438	Panthera_pardus
ENSTSYG00000027848	PCBP1	100	99.438	ENSPTIG00000007318	PCBP1	100	99.438	Panthera_tigris_altaica
ENSTSYG00000027848	PCBP1	100	99.438	ENSPTRG00000012025	PCBP1	100	99.438	Pan_troglodytes
ENSTSYG00000027848	PCBP1	100	99.438	ENSPANG00000011314	PCBP1	100	99.438	Papio_anubis
ENSTSYG00000027848	PCBP1	100	99.438	ENSPPYG00000012328	PCBP1	100	99.438	Pongo_abelii
ENSTSYG00000027848	PCBP1	100	99.438	ENSPCOG00000026934	PCBP1	100	99.438	Propithecus_coquereli
ENSTSYG00000027848	PCBP1	100	98.596	ENSRROG00000009684	-	95	98.596	Rhinopithecus_roxellana
ENSTSYG00000027848	PCBP1	93	98.193	ENSRROG00000012514	-	100	98.193	Rhinopithecus_roxellana
ENSTSYG00000027848	PCBP1	100	82.865	ENSSBOG00000035309	-	94	82.865	Saimiri_boliviensis_boliviensis
ENSTSYG00000027848	PCBP1	100	99.157	ENSSSCG00000027224	PCBP1	100	99.157	Sus_scrofa
ENSTSYG00000027848	PCBP1	51	99.444	ENSTBEG00000015706	-	51	99.444	Tupaia_belangeri
ENSTSYG00000027848	PCBP1	91	99.071	ENSVVUG00000028033	PCBP1	99	99.071	Vulpes_vulpes