EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000028860 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Minus strand
Length: 5013 bases
Position: chrKE949735.1:167473-172485
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000022129	RRM_1	PF00076.22	2.4e-13	1	1
ENSTSYP00000014317	RRM_1	PF00076.22	2.7e-13	1	1
ENSTSYP00000021931	RRM_1	PF00076.22	4.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000044367	-	1056	-	ENSTSYP00000014317	351 (aa)	-	UPI000C2F576E
ENSTSYT00000026235	-	1026	-	ENSTSYP00000022129	341 (aa)	-	UPI000C2F402D
ENSTSYT00000029583	-	1170	-	ENSTSYP00000021931	389 (aa)	-	UPI000C2F53FC

Gene Model

Click here to download ENSTSYG00000028860's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000028860's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000028860	-	86	54.795	ENSTSYG00000006417	HNRNPH1	56	54.795
ENSTSYG00000028860	-	76	50.704	ENSTSYG00000002112	-	86	32.727
ENSTSYG00000028860	-	87	36.735	ENSTSYG00000030439	-	88	36.628
ENSTSYG00000028860	-	99	80.716	ENSTSYG00000008487	-	100	84.906

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000028860	-	100	79.945	ENSG00000132463	GRSF1	100	83.962	Homo_sapiens
ENSTSYG00000028860	-	98	79.888	ENSAMEG00000005896	GRSF1	99	79.888	Ailuropoda_melanoleuca
ENSTSYG00000028860	-	98	60.224	ENSACAG00000012921	GRSF1	85	55.263	Anolis_carolinensis
ENSTSYG00000028860	-	99	80.278	ENSANAG00000022114	GRSF1	100	84.177	Aotus_nancymaae
ENSTSYG00000028860	-	100	79.121	ENSBTAG00000008577	GRSF1	100	79.121	Bos_taurus
ENSTSYG00000028860	-	99	80.556	ENSCJAG00000014477	GRSF1	99	85.714	Callithrix_jacchus
ENSTSYG00000028860	-	77	83.986	ENSCAFG00000002922	GRSF1	100	83.986	Canis_familiaris
ENSTSYG00000028860	-	99	79.722	ENSCAFG00020027060	GRSF1	99	74.760	Canis_lupus_dingo
ENSTSYG00000028860	-	99	78.889	ENSCHIG00000021580	GRSF1	85	71.776	Capra_hircus
ENSTSYG00000028860	-	85	77.922	ENSCAPG00000000156	GRSF1	100	77.922	Cavia_aperea
ENSTSYG00000028860	-	99	73.056	ENSCPOG00000011662	GRSF1	99	73.056	Cavia_porcellus
ENSTSYG00000028860	-	99	79.167	ENSCCAG00000028735	-	99	65.136	Cebus_capucinus
ENSTSYG00000028860	-	70	79.757	ENSCCAG00000024189	-	95	70.134	Cebus_capucinus
ENSTSYG00000028860	-	99	80.000	ENSCATG00000035808	GRSF1	99	85.161	Cercocebus_atys
ENSTSYG00000028860	-	98	73.743	ENSCLAG00000003057	GRSF1	99	73.743	Chinchilla_lanigera
ENSTSYG00000028860	-	99	79.722	ENSCSAG00000004856	GRSF1	99	65.762	Chlorocebus_sabaeus
ENSTSYG00000028860	-	99	60.335	ENSCPBG00000019502	GRSF1	85	52.339	Chrysemys_picta_bellii
ENSTSYG00000028860	-	88	84.277	ENSCANG00000037992	GRSF1	100	84.277	Colobus_angolensis_palliatus
ENSTSYG00000028860	-	99	78.056	ENSCGRG00001019953	Grsf1	99	78.056	Cricetulus_griseus_chok1gshd
ENSTSYG00000028860	-	99	78.056	ENSCGRG00000005357	Grsf1	99	78.056	Cricetulus_griseus_crigri
ENSTSYG00000028860	-	99	78.333	ENSDORG00000015145	Grsf1	100	91.971	Dipodomys_ordii
ENSTSYG00000028860	-	95	78.902	ENSETEG00000013786	GRSF1	100	78.902	Echinops_telfairi
ENSTSYG00000028860	-	99	79.722	ENSEASG00005016685	GRSF1	93	65.971	Equus_asinus_asinus
ENSTSYG00000028860	-	99	79.444	ENSECAG00000024208	GRSF1	80	72.330	Equus_caballus
ENSTSYG00000028860	-	87	41.772	ENSELUG00000011613	-	73	42.800	Esox_lucius
ENSTSYG00000028860	-	99	79.444	ENSFCAG00000007270	GRSF1	99	65.690	Felis_catus
ENSTSYG00000028860	-	88	48.457	ENSFALG00000008394	GRSF1	96	48.457	Ficedula_albicollis
ENSTSYG00000028860	-	74	83.942	ENSFDAG00000008167	-	100	83.942	Fukomys_damarensis
ENSTSYG00000028860	-	88	45.706	ENSGALG00000031160	GRSF1	66	47.419	Gallus_gallus
ENSTSYG00000028860	-	99	61.389	ENSGAGG00000006013	GRSF1	98	52.723	Gopherus_agassizii
ENSTSYG00000028860	-	88	84.277	ENSGGOG00000014852	-	100	84.277	Gorilla_gorilla
ENSTSYG00000028860	-	99	73.554	ENSHGLG00000000661	GRSF1	99	74.302	Heterocephalus_glaber_female
ENSTSYG00000028860	-	98	74.302	ENSHGLG00100005974	GRSF1	100	88.321	Heterocephalus_glaber_male
ENSTSYG00000028860	-	100	79.670	ENSSTOG00000011569	GRSF1	100	79.670	Ictidomys_tridecemlineatus
ENSTSYG00000028860	-	96	74.709	ENSJJAG00000005325	Grsf1	100	89.781	Jaculus_jaculus
ENSTSYG00000028860	-	97	47.293	ENSLACG00000009507	GRSF1	97	47.293	Latimeria_chalumnae
ENSTSYG00000028860	-	95	43.440	ENSLOCG00000011589	GRSF1	76	43.440	Lepisosteus_oculatus
ENSTSYG00000028860	-	99	77.473	ENSLAFG00000017032	-	97	70.448	Loxodonta_africana
ENSTSYG00000028860	-	99	79.722	ENSMFAG00000037346	GRSF1	99	84.839	Macaca_fascicularis
ENSTSYG00000028860	-	99	79.722	ENSMMUG00000000380	GRSF1	99	85.065	Macaca_mulatta
ENSTSYG00000028860	-	99	71.667	ENSMNEG00000023162	GRSF1	98	75.962	Macaca_nemestrina
ENSTSYG00000028860	-	100	79.945	ENSMLEG00000007180	GRSF1	99	85.161	Mandrillus_leucophaeus
ENSTSYG00000028860	-	88	45.706	ENSMGAG00000009940	GRSF1	94	45.706	Meleagris_gallopavo
ENSTSYG00000028860	-	99	78.611	ENSMICG00000005385	GRSF1	100	77.384	Microcebus_murinus
ENSTSYG00000028860	-	74	91.241	ENSMOCG00000012769	-	100	91.241	Microtus_ochrogaster
ENSTSYG00000028860	-	99	70.752	ENSMODG00000019088	GRSF1	89	59.329	Monodelphis_domestica
ENSTSYG00000028860	-	100	77.473	MGP_CAROLIEiJ_G0027377	Grsf1	100	91.241	Mus_caroli
ENSTSYG00000028860	-	100	77.473	ENSMUSG00000044221	Grsf1	100	91.241	Mus_musculus
ENSTSYG00000028860	-	100	75.549	MGP_PahariEiJ_G0017155	Grsf1	100	89.781	Mus_pahari
ENSTSYG00000028860	-	100	77.198	MGP_SPRETEiJ_G0028374	Grsf1	100	77.198	Mus_spretus
ENSTSYG00000028860	-	99	79.444	ENSMPUG00000009499	GRSF1	95	79.444	Mustela_putorius_furo
ENSTSYG00000028860	-	88	81.424	ENSMLUG00000028158	GRSF1	99	77.562	Myotis_lucifugus
ENSTSYG00000028860	-	74	91.971	ENSNGAG00000022132	-	100	91.971	Nannospalax_galili
ENSTSYG00000028860	-	85	84.466	ENSNLEG00000007721	-	99	84.194	Nomascus_leucogenys
ENSTSYG00000028860	-	99	59.331	ENSMEUG00000015942	GRSF1	99	59.331	Notamacropus_eugenii
ENSTSYG00000028860	-	96	76.431	ENSOPRG00000010148	-	77	76.431	Ochotona_princeps
ENSTSYG00000028860	-	99	62.222	ENSODEG00000004897	-	99	62.222	Octodon_degus
ENSTSYG00000028860	-	99	73.889	ENSODEG00000001826	-	99	62.313	Octodon_degus
ENSTSYG00000028860	-	94	65.497	ENSODEG00000010775	-	100	65.598	Octodon_degus
ENSTSYG00000028860	-	66	54.472	ENSOANG00000013696	-	100	54.472	Ornithorhynchus_anatinus
ENSTSYG00000028860	-	99	80.278	ENSOCUG00000010029	GRSF1	86	73.515	Oryctolagus_cuniculus
ENSTSYG00000028860	-	99	75.758	ENSOGAG00000000141	-	99	75.758	Otolemur_garnettii
ENSTSYG00000028860	-	99	67.967	ENSOGAG00000026370	-	100	59.911	Otolemur_garnettii
ENSTSYG00000028860	-	99	78.237	ENSOARG00000011898	GRSF1	99	78.237	Ovis_aries
ENSTSYG00000028860	-	88	83.962	ENSPPAG00000042456	-	100	83.962	Pan_paniscus
ENSTSYG00000028860	-	99	79.444	ENSPPRG00000022913	GRSF1	99	65.690	Panthera_pardus
ENSTSYG00000028860	-	100	79.121	ENSPTIG00000008060	GRSF1	100	79.121	Panthera_tigris_altaica
ENSTSYG00000028860	-	99	81.050	ENSPTRG00000016136	GRSF1	99	84.839	Pan_troglodytes
ENSTSYG00000028860	-	99	79.722	ENSPANG00000018597	GRSF1	99	84.839	Papio_anubis
ENSTSYG00000028860	-	97	65.306	ENSPSIG00000014267	-	95	65.306	Pelodiscus_sinensis
ENSTSYG00000028860	-	100	78.571	ENSPEMG00000012814	Grsf1	100	78.571	Peromyscus_maniculatus_bairdii
ENSTSYG00000028860	-	99	71.508	ENSPCIG00000000627	GRSF1	99	59.831	Phascolarctos_cinereus
ENSTSYG00000028860	-	99	63.930	ENSPPYG00000014812	GRSF1	99	53.362	Pongo_abelii
ENSTSYG00000028860	-	99	78.611	ENSPCAG00000013949	GRSF1	99	69.635	Procavia_capensis
ENSTSYG00000028860	-	99	78.889	ENSPVAG00000004338	GRSF1	99	70.045	Pteropus_vampyrus
ENSTSYG00000028860	-	99	77.222	ENSRNOG00000003392	Grsf1	97	75.741	Rattus_norvegicus
ENSTSYG00000028860	-	99	79.722	ENSRBIG00000036494	GRSF1	99	85.161	Rhinopithecus_bieti
ENSTSYG00000028860	-	99	79.722	ENSRROG00000035735	GRSF1	99	85.161	Rhinopithecus_roxellana
ENSTSYG00000028860	-	87	70.946	ENSSBOG00000032141	GRSF1	100	70.234	Saimiri_boliviensis_boliviensis
ENSTSYG00000028860	-	99	73.464	ENSSHAG00000018365	GRSF1	93	73.538	Sarcophilus_harrisii
ENSTSYG00000028860	-	85	82.792	ENSSARG00000011681	GRSF1	100	83.442	Sorex_araneus
ENSTSYG00000028860	-	96	53.736	ENSSPUG00000007576	GRSF1	99	47.204	Sphenodon_punctatus
ENSTSYG00000028860	-	99	78.889	ENSSSCG00000008940	GRSF1	83	74.121	Sus_scrofa
ENSTSYG00000028860	-	88	47.692	ENSTGUG00000001644	GRSF1	96	47.692	Taeniopygia_guttata
ENSTSYG00000028860	-	85	84.416	ENSTBEG00000010173	GRSF1	100	84.416	Tupaia_belangeri
ENSTSYG00000028860	-	99	74.167	ENSTTRG00000008405	GRSF1	97	70.725	Tursiops_truncatus
ENSTSYG00000028860	-	98	83.969	ENSUAMG00000008901	GRSF1	93	83.969	Ursus_americanus
ENSTSYG00000028860	-	99	80.000	ENSUMAG00000003757	GRSF1	86	80.000	Ursus_maritimus
ENSTSYG00000028860	-	99	68.333	ENSVPAG00000011889	GRSF1	99	68.333	Vicugna_pacos
ENSTSYG00000028860	-	94	80.290	ENSVVUG00000004150	GRSF1	100	80.290	Vulpes_vulpes
ENSTSYG00000028860	-	98	43.478	ENSXETG00000013850	grsf1	99	44.510	Xenopus_tropicalis