EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTSYG00000029495 (Gene tree)
Gene ID: 103259472
Gene Symbol: -
Alias: -
Full Name: pentatricopeptide repeat domain 1
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Plus strand
Length: 17215 bases
Position: chrKE938965.1:309478-326692
Accession: 103259472
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000030627	PPR	PF01535.20	5.5e-16	1	2
ENSTSYP00000030627	PPR	PF01535.20	5.5e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000047037	-	2115	XM_008057136	ENSTSYP00000030627	704 (aa)	XP_021567528	UPI000B530E8A

Gene Model

Click here to download ENSTSYG00000029495's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000029495's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000029495	-	100	79.774	ENSG00000248919	ATP5MF-PTCD1	93	79.915	Homo_sapiens
ENSTSYG00000029495	-	100	79.774	ENSG00000106246	PTCD1	100	79.915	Homo_sapiens
ENSTSYG00000029495	-	81	46.491	ENSAPOG00000010679	ptcd1	85	47.227	Acanthochromis_polyacanthus
ENSTSYG00000029495	-	100	81.303	ENSAMEG00000006224	-	93	81.303	Ailuropoda_melanoleuca
ENSTSYG00000029495	-	90	48.200	ENSACIG00000017861	ptcd1	86	48.693	Amphilophus_citrinellus
ENSTSYG00000029495	-	86	46.066	ENSAOCG00000022617	ptcd1	81	48.566	Amphiprion_ocellaris
ENSTSYG00000029495	-	90	46.939	ENSAOCG00000020741	-	80	49.402	Amphiprion_ocellaris
ENSTSYG00000029495	-	90	46.782	ENSAPEG00000022632	ptcd1	80	49.231	Amphiprion_percula
ENSTSYG00000029495	-	86	48.450	ENSATEG00000007016	ptcd1	80	49.236	Anabas_testudineus
ENSTSYG00000029495	-	87	60.000	ENSAPLG00000006862	-	95	60.000	Anas_platyrhynchos
ENSTSYG00000029495	-	99	55.887	ENSACAG00000012871	-	92	55.887	Anolis_carolinensis
ENSTSYG00000029495	-	98	80.406	ENSANAG00000035790	-	99	80.406	Aotus_nancymaae
ENSTSYG00000029495	-	83	48.173	ENSACLG00000002824	ptcd1	80	48.087	Astatotilapia_calliptera
ENSTSYG00000029495	-	87	47.287	ENSAMXG00000037292	ptcd1	90	47.287	Astyanax_mexicanus
ENSTSYG00000029495	-	100	78.865	ENSBTAG00000020440	-	87	78.865	Bos_taurus
ENSTSYG00000029495	-	100	79.632	ENSCJAG00000015815	-	100	79.632	Callithrix_jacchus
ENSTSYG00000029495	-	100	80.170	ENSCAFG00000015055	-	93	80.170	Canis_familiaris
ENSTSYG00000029495	-	100	80.170	ENSCAFG00020014480	-	93	80.170	Canis_lupus_dingo
ENSTSYG00000029495	-	100	79.433	ENSCHIG00000027000	-	99	79.433	Capra_hircus
ENSTSYG00000029495	-	93	76.596	ENSCAPG00000014660	-	98	77.259	Cavia_aperea
ENSTSYG00000029495	-	100	76.629	ENSCPOG00000001780	-	100	76.629	Cavia_porcellus
ENSTSYG00000029495	-	100	78.672	ENSCCAG00000034025	-	100	78.672	Cebus_capucinus
ENSTSYG00000029495	-	100	79.802	ENSCATG00000040859	-	100	80.226	Cercocebus_atys
ENSTSYG00000029495	-	97	79.913	ENSCLAG00000006354	-	100	78.612	Chinchilla_lanigera
ENSTSYG00000029495	-	92	79.475	ENSCSAG00000017794	-	95	79.938	Chlorocebus_sabaeus
ENSTSYG00000029495	-	87	60.526	ENSCPBG00000020866	-	83	62.219	Chrysemys_picta_bellii
ENSTSYG00000029495	-	83	32.215	ENSCING00000007717	-	91	31.127	Ciona_intestinalis
ENSTSYG00000029495	-	100	78.895	ENSCANG00000023441	-	100	79.178	Colobus_angolensis_palliatus
ENSTSYG00000029495	-	100	75.813	ENSCGRG00001023686	Ptcd1	100	74.965	Cricetulus_griseus_chok1gshd
ENSTSYG00000029495	-	99	75.317	ENSCGRG00000015031	Ptcd1	100	75.176	Cricetulus_griseus_crigri
ENSTSYG00000029495	-	84	47.078	ENSCSEG00000002378	ptcd1	80	47.279	Cynoglossus_semilaevis
ENSTSYG00000029495	-	85	46.393	ENSCVAG00000003621	ptcd1	88	45.588	Cyprinodon_variegatus
ENSTSYG00000029495	-	84	46.678	ENSCVAG00000015826	ptcd1	81	46.578	Cyprinodon_variegatus
ENSTSYG00000029495	-	88	49.522	ENSDARG00000076176	ptcd1	87	48.953	Danio_rerio
ENSTSYG00000029495	-	100	76.761	ENSDNOG00000009957	-	100	77.324	Dasypus_novemcinctus
ENSTSYG00000029495	-	99	75.783	ENSDORG00000000740	Ptcd1	100	75.641	Dipodomys_ordii
ENSTSYG00000029495	-	93	40.084	ENSEBUG00000014515	ptcd1	98	41.969	Eptatretus_burgeri
ENSTSYG00000029495	-	100	81.831	ENSEASG00005002480	-	100	81.831	Equus_asinus_asinus
ENSTSYG00000029495	-	100	82.254	ENSECAG00000016617	-	100	82.254	Equus_caballus
ENSTSYG00000029495	-	96	42.857	ENSELUG00000016517	ptcd1	82	45.774	Esox_lucius
ENSTSYG00000029495	-	100	80.595	ENSFCAG00000015069	-	100	80.595	Felis_catus
ENSTSYG00000029495	-	86	61.736	ENSFALG00000013803	-	86	61.722	Ficedula_albicollis
ENSTSYG00000029495	-	100	78.045	ENSFDAG00000006393	-	100	77.479	Fukomys_damarensis
ENSTSYG00000029495	-	74	47.719	ENSFHEG00000012491	ptcd1	87	47.529	Fundulus_heteroclitus
ENSTSYG00000029495	-	82	48.021	ENSGMOG00000007639	ptcd1	91	47.849	Gadus_morhua
ENSTSYG00000029495	-	87	59.843	ENSGALG00000004711	-	87	60.157	Gallus_gallus
ENSTSYG00000029495	-	86	46.493	ENSGAFG00000013175	ptcd1	84	46.493	Gambusia_affinis
ENSTSYG00000029495	-	85	47.674	ENSGACG00000016607	ptcd1	91	47.769	Gasterosteus_aculeatus
ENSTSYG00000029495	-	83	60.000	ENSGAGG00000021832	-	84	61.131	Gopherus_agassizii
ENSTSYG00000029495	-	99	79.603	ENSGGOG00000015123	-	99	79.745	Gorilla_gorilla
ENSTSYG00000029495	-	83	48.007	ENSHBUG00000018275	ptcd1	80	47.920	Haplochromis_burtoni
ENSTSYG00000029495	-	100	78.501	ENSHGLG00000017621	-	100	78.501	Heterocephalus_glaber_female
ENSTSYG00000029495	-	100	78.501	ENSHGLG00100007218	-	100	78.501	Heterocephalus_glaber_male
ENSTSYG00000029495	-	87	46.305	ENSHCOG00000010784	ptcd1	82	47.782	Hippocampus_comes
ENSTSYG00000029495	-	100	79.267	ENSSTOG00000001682	-	100	78.903	Ictidomys_tridecemlineatus
ENSTSYG00000029495	-	100	74.363	ENSJJAG00000000319	Ptcd1	100	73.796	Jaculus_jaculus
ENSTSYG00000029495	-	84	47.819	ENSKMAG00000008708	ptcd1	80	47.878	Kryptolebias_marmoratus
ENSTSYG00000029495	-	83	47.458	ENSLBEG00000008061	ptcd1	80	48.382	Labrus_bergylta
ENSTSYG00000029495	-	87	57.189	ENSLACG00000011172	ptcd1	83	58.236	Latimeria_chalumnae
ENSTSYG00000029495	-	92	53.037	ENSLOCG00000004833	ptcd1	94	54.337	Lepisosteus_oculatus
ENSTSYG00000029495	-	100	74.262	ENSLAFG00000002588	-	100	74.262	Loxodonta_africana
ENSTSYG00000029495	-	100	79.520	ENSMFAG00000041324	-	100	79.944	Macaca_fascicularis
ENSTSYG00000029495	-	100	79.379	ENSMMUG00000030408	-	100	79.802	Macaca_mulatta
ENSTSYG00000029495	-	100	79.520	ENSMNEG00000043786	-	100	79.944	Macaca_nemestrina
ENSTSYG00000029495	-	100	60.311	ENSMLEG00000031179	-	100	62.571	Mandrillus_leucophaeus
ENSTSYG00000029495	-	84	49.916	ENSMAMG00000007623	ptcd1	80	49.577	Mastacembelus_armatus
ENSTSYG00000029495	-	83	48.173	ENSMZEG00005012722	ptcd1	80	48.087	Maylandia_zebra
ENSTSYG00000029495	-	99	57.163	ENSMGAG00000004211	-	93	55.989	Meleagris_gallopavo
ENSTSYG00000029495	-	100	81.844	ENSMICG00000017428	-	100	81.702	Microcebus_murinus
ENSTSYG00000029495	-	86	46.743	ENSMMOG00000020243	ptcd1	88	47.157	Mola_mola
ENSTSYG00000029495	-	98	60.000	ENSMODG00000001350	-	98	59.128	Monodelphis_domestica
ENSTSYG00000029495	-	86	49.106	ENSMALG00000018442	ptcd1	80	49.581	Monopterus_albus
ENSTSYG00000029495	-	99	75.568	MGP_CAROLIEiJ_G0028011	Ptcd1	99	75.568	Mus_caroli
ENSTSYG00000029495	-	99	75.142	ENSMUSG00000029624	Ptcd1	99	75.142	Mus_musculus
ENSTSYG00000029495	-	99	75.568	MGP_PahariEiJ_G0024580	Ptcd1	99	75.568	Mus_pahari
ENSTSYG00000029495	-	99	75.284	MGP_SPRETEiJ_G0029012	Ptcd1	99	75.284	Mus_spretus
ENSTSYG00000029495	-	100	78.187	ENSMPUG00000016518	-	100	78.451	Mustela_putorius_furo
ENSTSYG00000029495	-	100	83.099	ENSMLUG00000010994	-	94	83.239	Myotis_lucifugus
ENSTSYG00000029495	-	85	49.259	ENSNBRG00000010079	ptcd1	84	48.684	Neolamprologus_brichardi
ENSTSYG00000029495	-	100	82.940	ENSNLEG00000011060	-	99	82.940	Nomascus_leucogenys
ENSTSYG00000029495	-	97	61.714	ENSMEUG00000006930	-	99	61.000	Notamacropus_eugenii
ENSTSYG00000029495	-	90	76.279	ENSOPRG00000013647	-	90	76.047	Ochotona_princeps
ENSTSYG00000029495	-	87	46.850	ENSONIG00000003168	ptcd1	99	46.624	Oreochromis_niloticus
ENSTSYG00000029495	-	80	58.053	ENSOANG00000007728	-	73	58.273	Ornithorhynchus_anatinus
ENSTSYG00000029495	-	99	75.424	ENSOCUG00000010584	-	98	74.612	Oryctolagus_cuniculus
ENSTSYG00000029495	-	85	46.557	ENSORLG00000009275	ptcd1	85	46.293	Oryzias_latipes
ENSTSYG00000029495	-	85	46.393	ENSORLG00020000988	ptcd1	85	46.129	Oryzias_latipes_hni
ENSTSYG00000029495	-	85	46.305	ENSORLG00015010557	ptcd1	85	46.040	Oryzias_latipes_hsok
ENSTSYG00000029495	-	96	44.718	ENSOMEG00000020627	ptcd1	88	47.078	Oryzias_melastigma
ENSTSYG00000029495	-	99	79.487	ENSOGAG00000010877	-	99	79.345	Otolemur_garnettii
ENSTSYG00000029495	-	100	74.504	ENSOARG00000018676	-	100	74.504	Ovis_aries
ENSTSYG00000029495	-	100	79.208	ENSPPAG00000036024	-	100	79.349	Pan_paniscus
ENSTSYG00000029495	-	100	81.135	ENSPPRG00000003478	-	100	81.135	Panthera_pardus
ENSTSYG00000029495	-	100	79.491	ENSPTRG00000019452	-	100	79.632	Pan_troglodytes
ENSTSYG00000029495	-	100	79.661	ENSPANG00000016730	-	100	80.085	Papio_anubis
ENSTSYG00000029495	-	95	49.408	ENSPKIG00000014215	ptcd1	87	52.373	Paramormyrops_kingsleyae
ENSTSYG00000029495	-	85	59.967	ENSPSIG00000011184	-	100	60.631	Pelodiscus_sinensis
ENSTSYG00000029495	-	73	42.366	ENSPMAG00000009667	ptcd1	100	41.954	Petromyzon_marinus
ENSTSYG00000029495	-	98	60.110	ENSPCIG00000024778	-	84	65.916	Phascolarctos_cinereus
ENSTSYG00000029495	-	84	46.854	ENSPFOG00000004458	ptcd1	82	46.922	Poecilia_formosa
ENSTSYG00000029495	-	86	46.254	ENSPLAG00000011051	ptcd1	82	46.745	Poecilia_latipinna
ENSTSYG00000029495	-	84	46.523	ENSPMEG00000020547	ptcd1	82	46.589	Poecilia_mexicana
ENSTSYG00000029495	-	85	46.293	ENSPREG00000000059	ptcd1	82	46.823	Poecilia_reticulata
ENSTSYG00000029495	-	94	80.995	ENSPPYG00000017377	-	99	80.995	Pongo_abelii
ENSTSYG00000029495	-	81	80.142	ENSPCAG00000001852	-	88	80.576	Procavia_capensis
ENSTSYG00000029495	-	100	83.239	ENSPCOG00000018596	-	100	83.097	Propithecus_coquereli
ENSTSYG00000029495	-	67	87.000	ENSPVAG00000007529	-	71	88.043	Pteropus_vampyrus
ENSTSYG00000029495	-	83	48.173	ENSPNYG00000019993	ptcd1	80	48.087	Pundamilia_nyererei
ENSTSYG00000029495	-	89	50.553	ENSPNAG00000014931	ptcd1	90	49.145	Pygocentrus_nattereri
ENSTSYG00000029495	-	99	76.259	ENSRNOG00000000987	Ptcd1	99	75.827	Rattus_norvegicus
ENSTSYG00000029495	-	100	79.603	ENSRBIG00000043393	-	100	79.887	Rhinopithecus_bieti
ENSTSYG00000029495	-	100	79.462	ENSRROG00000036420	-	100	79.745	Rhinopithecus_roxellana
ENSTSYG00000029495	-	100	79.915	ENSSBOG00000024114	-	100	79.915	Saimiri_boliviensis_boliviensis
ENSTSYG00000029495	-	99	57.375	ENSSHAG00000011376	-	92	63.725	Sarcophilus_harrisii
ENSTSYG00000029495	-	88	53.155	ENSSFOG00015007909	ptcd1	85	53.386	Scleropages_formosus
ENSTSYG00000029495	-	88	44.516	ENSSMAG00000000218	ptcd1	95	44.805	Scophthalmus_maximus
ENSTSYG00000029495	-	98	44.915	ENSSDUG00000015671	ptcd1	95	44.255	Seriola_dumerili
ENSTSYG00000029495	-	96	44.606	ENSSLDG00000014261	ptcd1	94	44.461	Seriola_lalandi_dorsalis
ENSTSYG00000029495	-	87	56.610	ENSSPUG00000003540	-	84	58.019	Sphenodon_punctatus
ENSTSYG00000029495	-	87	48.071	ENSSPAG00000011049	ptcd1	83	48.071	Stegastes_partitus
ENSTSYG00000029495	-	92	80.093	ENSSSCG00000007622	-	96	80.218	Sus_scrofa
ENSTSYG00000029495	-	87	61.039	ENSTGUG00000007563	-	99	62.069	Taeniopygia_guttata
ENSTSYG00000029495	-	85	48.333	ENSTRUG00000013471	ptcd1	79	48.382	Takifugu_rubripes
ENSTSYG00000029495	-	83	47.878	ENSTNIG00000008271	ptcd1	83	47.692	Tetraodon_nigroviridis
ENSTSYG00000029495	-	100	79.661	ENSTBEG00000011021	-	100	79.237	Tupaia_belangeri
ENSTSYG00000029495	-	100	78.298	ENSTTRG00000003006	-	100	78.298	Tursiops_truncatus
ENSTSYG00000029495	-	100	80.878	ENSUAMG00000008049	-	100	80.878	Ursus_americanus
ENSTSYG00000029495	-	99	79.943	ENSVVUG00000008836	-	100	79.943	Vulpes_vulpes
ENSTSYG00000029495	-	92	50.076	ENSXETG00000009891	ptcd1	88	51.846	Xenopus_tropicalis
ENSTSYG00000029495	-	85	45.634	ENSXMAG00000015540	ptcd1	82	45.896	Xiphophorus_maculatus