EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000030015 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Minus strand
Length: 3000 bases
Position: chrKE937862.1:23-3022
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000023805	LSM	PF01423.22	1.8e-13	1	1
ENSTSYP00000022419	LSM	PF01423.22	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000034535	-	237	-	ENSTSYP00000022419	79 (aa)	-	UPI000C2F5FD5
ENSTSYT00000031047	-	201	-	ENSTSYP00000033188	67 (aa)	-	UPI000C2F5979
ENSTSYT00000034766	-	282	-	ENSTSYP00000023805	94 (aa)	-	UPI000C2F3F53

Gene Model

Click here to download ENSTSYG00000030015's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000030015's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000030015	-	83	32.500	ENSTSYG00000030906	LSM4	55	32.500
ENSTSYG00000030015	-	100	89.362	ENSTSYG00000034844	LSM2	99	89.362

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000030015	-	100	89.362	ENSG00000204392	LSM2	99	89.362	Homo_sapiens
ENSTSYG00000030015	-	100	89.362	ENSAPOG00000017967	si:ch73-14h10.2	99	89.362	Acanthochromis_polyacanthus
ENSTSYG00000030015	-	99	89.247	ENSAMEG00000006483	LSM2	99	89.247	Ailuropoda_melanoleuca
ENSTSYG00000030015	-	99	89.247	ENSACIG00000007795	si:ch73-14h10.2	62	89.247	Amphilophus_citrinellus
ENSTSYG00000030015	-	99	89.247	ENSAOCG00000006949	si:ch73-14h10.2	77	89.247	Amphiprion_ocellaris
ENSTSYG00000030015	-	99	89.247	ENSAPEG00000020375	si:ch73-14h10.2	86	89.247	Amphiprion_percula
ENSTSYG00000030015	-	100	89.362	ENSATEG00000011376	si:ch73-14h10.2	99	89.362	Anabas_testudineus
ENSTSYG00000030015	-	99	89.247	ENSACAG00000017281	LSM2	89	89.247	Anolis_carolinensis
ENSTSYG00000030015	-	94	81.081	ENSANAG00000028033	-	90	73.256	Aotus_nancymaae
ENSTSYG00000030015	-	100	89.362	ENSANAG00000028372	LSM2	99	89.362	Aotus_nancymaae
ENSTSYG00000030015	-	100	89.362	ENSACLG00000024717	smx5	99	89.362	Astatotilapia_calliptera
ENSTSYG00000030015	-	100	89.362	ENSAMXG00000036868	si:ch73-14h10.2	99	89.362	Astyanax_mexicanus
ENSTSYG00000030015	-	100	89.362	ENSBTAG00000005634	LSM2	99	89.362	Bos_taurus
ENSTSYG00000030015	-	95	82.022	WBGene00001808	gut-2	92	82.022	Caenorhabditis_elegans
ENSTSYG00000030015	-	100	89.362	ENSCJAG00000040899	LSM2	99	89.362	Callithrix_jacchus
ENSTSYG00000030015	-	89	87.143	ENSCAFG00020016978	-	86	87.143	Canis_lupus_dingo
ENSTSYG00000030015	-	99	89.247	ENSCHIG00000016153	LSM2	99	89.247	Capra_hircus
ENSTSYG00000030015	-	90	85.915	ENSCAPG00000009970	LSM2	91	85.915	Cavia_aperea
ENSTSYG00000030015	-	100	89.362	ENSCPOG00000021053	LSM2	99	89.362	Cavia_porcellus
ENSTSYG00000030015	-	100	89.362	ENSCCAG00000024276	LSM2	99	89.362	Cebus_capucinus
ENSTSYG00000030015	-	100	89.362	ENSCATG00000013737	LSM2	99	89.362	Cercocebus_atys
ENSTSYG00000030015	-	100	89.362	ENSCLAG00000008081	LSM2	99	89.362	Chinchilla_lanigera
ENSTSYG00000030015	-	100	89.362	ENSCSAG00000008800	LSM2	99	89.362	Chlorocebus_sabaeus
ENSTSYG00000030015	-	100	89.362	ENSCHOG00000007702	LSM2	99	89.362	Choloepus_hoffmanni
ENSTSYG00000030015	-	96	92.222	ENSCING00000022677	-	95	92.222	Ciona_intestinalis
ENSTSYG00000030015	-	100	89.362	ENSCANG00000039576	LSM2	99	89.362	Colobus_angolensis_palliatus
ENSTSYG00000030015	-	100	89.362	ENSCGRG00001013932	Lsm2	99	89.362	Cricetulus_griseus_chok1gshd
ENSTSYG00000030015	-	90	85.915	ENSCGRG00000013311	Lsm2	61	85.915	Cricetulus_griseus_crigri
ENSTSYG00000030015	-	100	89.362	ENSCSEG00000002911	si:ch73-14h10.2	99	89.362	Cynoglossus_semilaevis
ENSTSYG00000030015	-	99	89.247	ENSCVAG00000015394	si:ch73-14h10.2	88	89.247	Cyprinodon_variegatus
ENSTSYG00000030015	-	100	89.362	ENSDARG00000070867	smx5	99	89.362	Danio_rerio
ENSTSYG00000030015	-	99	89.247	ENSDNOG00000002633	LSM2	99	89.247	Dasypus_novemcinctus
ENSTSYG00000030015	-	100	89.362	ENSDORG00000026571	Lsm2	99	89.362	Dipodomys_ordii
ENSTSYG00000030015	-	96	90.000	FBgn0036277	CG10418	95	90.000	Drosophila_melanogaster
ENSTSYG00000030015	-	99	89.247	ENSEASG00005015670	LSM2	75	93.258	Equus_asinus_asinus
ENSTSYG00000030015	-	99	89.247	ENSECAG00000018791	LSM2	75	93.258	Equus_caballus
ENSTSYG00000030015	-	100	89.362	ENSELUG00000008241	smx5	99	89.362	Esox_lucius
ENSTSYG00000030015	-	100	89.362	ENSFCAG00000045887	LSM2	99	89.362	Felis_catus
ENSTSYG00000030015	-	100	89.362	ENSFDAG00000000390	LSM2	99	89.362	Fukomys_damarensis
ENSTSYG00000030015	-	99	86.316	ENSFHEG00000009619	si:ch73-14h10.2	99	86.316	Fundulus_heteroclitus
ENSTSYG00000030015	-	99	89.247	ENSGMOG00000019208	si:ch73-14h10.2	99	89.247	Gadus_morhua
ENSTSYG00000030015	-	100	89.362	ENSGAFG00000017286	si:ch73-14h10.2	99	89.362	Gambusia_affinis
ENSTSYG00000030015	-	100	89.362	ENSGACG00000003827	si:ch73-14h10.2	99	89.362	Gasterosteus_aculeatus
ENSTSYG00000030015	-	100	89.362	ENSGAGG00000012458	LSM2	99	89.362	Gopherus_agassizii
ENSTSYG00000030015	-	100	89.362	ENSGGOG00000011383	LSM2	99	89.362	Gorilla_gorilla
ENSTSYG00000030015	-	100	89.362	ENSHGLG00000011299	LSM2	99	89.362	Heterocephalus_glaber_female
ENSTSYG00000030015	-	100	89.362	ENSHGLG00100017194	LSM2	99	89.362	Heterocephalus_glaber_male
ENSTSYG00000030015	-	100	89.362	ENSHCOG00000014057	si:ch73-14h10.2	99	89.362	Hippocampus_comes
ENSTSYG00000030015	-	100	89.362	ENSIPUG00000010539	lsm2	99	89.362	Ictalurus_punctatus
ENSTSYG00000030015	-	100	89.362	ENSSTOG00000013144	LSM2	99	89.362	Ictidomys_tridecemlineatus
ENSTSYG00000030015	-	94	65.909	ENSJJAG00000019477	-	99	65.909	Jaculus_jaculus
ENSTSYG00000030015	-	100	89.362	ENSKMAG00000014909	si:ch73-14h10.2	99	89.362	Kryptolebias_marmoratus
ENSTSYG00000030015	-	99	88.172	ENSLBEG00000025781	si:ch73-14h10.2	97	88.172	Labrus_bergylta
ENSTSYG00000030015	-	100	89.362	ENSLACG00000015064	LSM2	99	89.362	Latimeria_chalumnae
ENSTSYG00000030015	-	100	89.362	ENSLOCG00000005228	si:ch73-14h10.2	99	89.362	Lepisosteus_oculatus
ENSTSYG00000030015	-	99	89.247	ENSLAFG00000016139	LSM2	99	89.247	Loxodonta_africana
ENSTSYG00000030015	-	100	89.362	ENSMFAG00000001016	LSM2	99	89.362	Macaca_fascicularis
ENSTSYG00000030015	-	100	89.362	ENSMMUG00000006832	LSM2	99	89.362	Macaca_mulatta
ENSTSYG00000030015	-	94	81.818	ENSMMUG00000045473	-	90	81.818	Macaca_mulatta
ENSTSYG00000030015	-	100	89.362	ENSMNEG00000045355	LSM2	99	89.362	Macaca_nemestrina
ENSTSYG00000030015	-	89	84.286	ENSMNEG00000040973	-	84	85.507	Macaca_nemestrina
ENSTSYG00000030015	-	100	89.362	ENSMLEG00000037369	-	99	89.362	Mandrillus_leucophaeus
ENSTSYG00000030015	-	94	80.682	ENSMLEG00000031181	-	90	80.682	Mandrillus_leucophaeus
ENSTSYG00000030015	-	100	89.362	ENSMAMG00000010053	si:ch73-14h10.2	72	89.362	Mastacembelus_armatus
ENSTSYG00000030015	-	99	87.368	ENSMZEG00005008688	si:ch73-14h10.2	99	87.368	Maylandia_zebra
ENSTSYG00000030015	-	100	89.362	ENSMAUG00000021966	Lsm2	99	89.362	Mesocricetus_auratus
ENSTSYG00000030015	-	90	67.606	ENSMICG00000046764	-	90	67.606	Microcebus_murinus
ENSTSYG00000030015	-	100	89.362	ENSMOCG00000015306	Lsm2	99	89.362	Microtus_ochrogaster
ENSTSYG00000030015	-	99	88.172	ENSMMOG00000005603	si:ch73-14h10.2	99	88.172	Mola_mola
ENSTSYG00000030015	-	99	89.247	ENSMODG00000015177	LSM2	98	89.247	Monodelphis_domestica
ENSTSYG00000030015	-	100	89.362	ENSMALG00000016490	si:ch73-14h10.2	99	89.362	Monopterus_albus
ENSTSYG00000030015	-	100	89.362	MGP_CAROLIEiJ_G0021490	Lsm2	99	89.362	Mus_caroli
ENSTSYG00000030015	-	100	89.362	ENSMUSG00000007050	Lsm2	99	89.362	Mus_musculus
ENSTSYG00000030015	-	100	89.362	MGP_PahariEiJ_G0020485	Lsm2	99	89.362	Mus_pahari
ENSTSYG00000030015	-	100	89.362	MGP_SPRETEiJ_G0022395	Lsm2	99	89.362	Mus_spretus
ENSTSYG00000030015	-	100	89.362	ENSNGAG00000003997	Lsm2	99	89.362	Nannospalax_galili
ENSTSYG00000030015	-	99	87.368	ENSNBRG00000012904	si:ch73-14h10.2	99	87.368	Neolamprologus_brichardi
ENSTSYG00000030015	-	100	89.362	ENSNLEG00000035542	LSM2	99	89.362	Nomascus_leucogenys
ENSTSYG00000030015	-	89	85.714	ENSMEUG00000003419	LSM2	99	85.714	Notamacropus_eugenii
ENSTSYG00000030015	-	100	89.362	ENSOPRG00000003668	LSM2	99	89.362	Ochotona_princeps
ENSTSYG00000030015	-	100	89.362	ENSODEG00000017583	LSM2	99	89.362	Octodon_degus
ENSTSYG00000030015	-	100	89.362	ENSONIG00000019321	si:ch73-14h10.2	99	89.362	Oreochromis_niloticus
ENSTSYG00000030015	-	99	89.247	ENSOANG00000005398	LSM2	99	89.247	Ornithorhynchus_anatinus
ENSTSYG00000030015	-	100	89.362	ENSOCUG00000002583	LSM2	99	89.362	Oryctolagus_cuniculus
ENSTSYG00000030015	-	100	89.362	ENSORLG00000029858	si:ch73-14h10.2	99	89.362	Oryzias_latipes
ENSTSYG00000030015	-	100	68.293	ENSORLG00015000465	si:ch73-14h10.2	99	68.293	Oryzias_latipes_hsok
ENSTSYG00000030015	-	100	89.362	ENSOMEG00000002892	si:ch73-14h10.2	99	89.362	Oryzias_melastigma
ENSTSYG00000030015	-	99	89.247	ENSOARG00000004575	LSM2	99	89.247	Ovis_aries
ENSTSYG00000030015	-	100	89.362	ENSPPAG00000032431	LSM2	99	89.362	Pan_paniscus
ENSTSYG00000030015	-	91	83.562	ENSPPAG00000043941	-	93	81.333	Pan_paniscus
ENSTSYG00000030015	-	100	89.362	ENSPPRG00000015353	LSM2	99	89.362	Panthera_pardus
ENSTSYG00000030015	-	99	89.247	ENSPTIG00000010303	LSM2	98	89.247	Panthera_tigris_altaica
ENSTSYG00000030015	-	100	89.362	ENSPTRG00000017986	LSM2	99	89.362	Pan_troglodytes
ENSTSYG00000030015	-	100	89.362	ENSPANG00000024577	LSM2	99	89.362	Papio_anubis
ENSTSYG00000030015	-	100	89.362	ENSPKIG00000007028	si:ch73-14h10.2	99	89.362	Paramormyrops_kingsleyae
ENSTSYG00000030015	-	99	89.247	ENSPSIG00000004458	LSM2	78	89.247	Pelodiscus_sinensis
ENSTSYG00000030015	-	99	87.097	ENSPMGG00000018511	si:ch73-14h10.2	99	87.097	Periophthalmus_magnuspinnatus
ENSTSYG00000030015	-	99	89.247	ENSPCIG00000018560	-	94	89.247	Phascolarctos_cinereus
ENSTSYG00000030015	-	100	89.362	ENSPFOG00000001621	si:ch73-14h10.2	99	89.362	Poecilia_formosa
ENSTSYG00000030015	-	100	89.362	ENSPLAG00000017165	si:ch73-14h10.2	99	89.362	Poecilia_latipinna
ENSTSYG00000030015	-	100	89.362	ENSPMEG00000019574	si:ch73-14h10.2	99	89.362	Poecilia_mexicana
ENSTSYG00000030015	-	99	88.172	ENSPREG00000016534	si:ch73-14h10.2	99	88.172	Poecilia_reticulata
ENSTSYG00000030015	-	100	89.362	ENSPPYG00000016461	-	53	89.362	Pongo_abelii
ENSTSYG00000030015	-	100	89.362	ENSPCAG00000013737	LSM2	99	89.362	Procavia_capensis
ENSTSYG00000030015	-	100	89.362	ENSPCOG00000020134	LSM2	99	89.362	Propithecus_coquereli
ENSTSYG00000030015	-	100	89.362	ENSPVAG00000012405	LSM2	99	89.362	Pteropus_vampyrus
ENSTSYG00000030015	-	100	89.362	ENSPNYG00000019298	smx5	99	89.362	Pundamilia_nyererei
ENSTSYG00000030015	-	100	89.362	ENSPNAG00000027769	si:ch73-14h10.2	99	89.362	Pygocentrus_nattereri
ENSTSYG00000030015	-	56	92.453	ENSRNOG00000011065	AC126899.1	76	92.453	Rattus_norvegicus
ENSTSYG00000030015	-	100	89.362	ENSRNOG00000048725	Lsm2	99	89.362	Rattus_norvegicus
ENSTSYG00000030015	-	100	89.362	ENSRBIG00000010172	LSM2	99	89.362	Rhinopithecus_bieti
ENSTSYG00000030015	-	89	84.286	ENSRBIG00000011356	-	84	85.507	Rhinopithecus_bieti
ENSTSYG00000030015	-	100	89.362	ENSRROG00000030345	LSM2	99	89.362	Rhinopithecus_roxellana
ENSTSYG00000030015	-	89	84.286	ENSRROG00000030708	-	84	85.507	Rhinopithecus_roxellana
ENSTSYG00000030015	-	100	60.638	YBL026W	LSM2	99	60.638	Saccharomyces_cerevisiae
ENSTSYG00000030015	-	100	89.362	ENSSBOG00000018943	LSM2	99	89.362	Saimiri_boliviensis_boliviensis
ENSTSYG00000030015	-	100	89.362	ENSSFOG00015006734	lsm2	99	89.362	Scleropages_formosus
ENSTSYG00000030015	-	100	89.362	ENSSMAG00000001122	si:ch73-14h10.2	99	89.362	Scophthalmus_maximus
ENSTSYG00000030015	-	100	89.362	ENSSDUG00000021605	smx5	99	89.362	Seriola_dumerili
ENSTSYG00000030015	-	100	89.362	ENSSLDG00000002765	si:ch73-14h10.2	99	89.362	Seriola_lalandi_dorsalis
ENSTSYG00000030015	-	100	89.362	ENSSPUG00000009631	LSM2	99	89.362	Sphenodon_punctatus
ENSTSYG00000030015	-	100	89.362	ENSSPAG00000016904	si:ch73-14h10.2	99	89.362	Stegastes_partitus
ENSTSYG00000030015	-	100	89.362	ENSSSCG00000039021	LSM2	99	89.362	Sus_scrofa
ENSTSYG00000030015	-	99	88.172	ENSTRUG00000002093	si:ch73-14h10.2	99	88.172	Takifugu_rubripes
ENSTSYG00000030015	-	70	92.424	ENSTNIG00000013770	si:ch73-14h10.2	99	92.424	Tetraodon_nigroviridis
ENSTSYG00000030015	-	100	89.362	ENSTTRG00000014131	LSM2	99	89.362	Tursiops_truncatus
ENSTSYG00000030015	-	99	89.247	ENSUMAG00000013425	LSM2	65	89.247	Ursus_maritimus
ENSTSYG00000030015	-	99	89.247	ENSVPAG00000001761	LSM2	99	89.247	Vicugna_pacos
ENSTSYG00000030015	-	94	85.135	ENSVVUG00000016264	-	91	85.135	Vulpes_vulpes
ENSTSYG00000030015	-	100	89.362	ENSXETG00000024077	lsm2	99	89.362	Xenopus_tropicalis
ENSTSYG00000030015	-	99	88.172	ENSXCOG00000006078	si:ch73-14h10.2	99	88.172	Xiphophorus_couchianus
ENSTSYG00000030015	-	99	88.172	ENSXMAG00000028018	si:ch73-14h10.2	99	88.172	Xiphophorus_maculatus