EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000030531 (Gene tree)
Gene ID: 103276762
Gene Symbol: RAB5C
Alias: -
Full Name: RAB5C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Plus strand
Length: 24800 bases
Position: chrKE950569.1:138374-163173
Accession: 103276762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000019561	MMR_HSR1	PF01926.23	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000036942	RAB5C-202	690	-	ENSTSYP00000030747	229 (aa)	-	UPI000C2F72F5
ENSTSYT00000029314	RAB5C-201	1663	XM_008074197	ENSTSYP00000019561	216 (aa)	XP_008072388	A0A1U7UUE0

Gene Model

Click here to download ENSTSYG00000030531's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000030531's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000030531	RAB5C	95	43.689	ENSTSYG00000025638	RAB1B	100	43.689
ENSTSYG00000030531	RAB5C	77	33.333	ENSTSYG00000011437	RERG	84	33.333
ENSTSYG00000030531	RAB5C	85	41.622	ENSTSYG00000013092	RAB18	94	39.409
ENSTSYG00000030531	RAB5C	88	40.526	ENSTSYG00000033832	RAB2B	88	40.526
ENSTSYG00000030531	RAB5C	73	31.250	ENSTSYG00000030891	RAB34	62	31.250
ENSTSYG00000030531	RAB5C	77	42.442	ENSTSYG00000002313	RAB7A	83	42.442
ENSTSYG00000030531	RAB5C	81	33.702	ENSTSYG00000003745	HRAS	94	33.702
ENSTSYG00000030531	RAB5C	93	38.164	ENSTSYG00000033032	RAB33B	93	37.788
ENSTSYG00000030531	RAB5C	89	34.848	ENSTSYG00000008912	RAB9B	97	34.848
ENSTSYG00000030531	RAB5C	72	33.121	ENSTSYG00000034760	-	85	32.692
ENSTSYG00000030531	RAB5C	75	36.585	ENSTSYG00000030186	RAB39B	77	36.585
ENSTSYG00000030531	RAB5C	80	35.838	ENSTSYG00000029126	RAB23	73	35.838
ENSTSYG00000030531	RAB5C	53	39.130	ENSTSYG00000004323	-	50	39.130
ENSTSYG00000030531	RAB5C	77	32.934	ENSTSYG00000032750	KRAS	95	30.387
ENSTSYG00000030531	RAB5C	100	87.500	ENSTSYG00000007642	-	100	87.500
ENSTSYG00000030531	RAB5C	76	42.683	ENSTSYG00000014136	-	76	42.683
ENSTSYG00000030531	RAB5C	89	43.077	ENSTSYG00000005996	RAB1A	98	43.077
ENSTSYG00000030531	RAB5C	83	39.459	ENSTSYG00000009392	RAB30	91	39.459
ENSTSYG00000030531	RAB5C	75	44.720	ENSTSYG00000030301	RAB2A	76	44.720
ENSTSYG00000030531	RAB5C	97	85.646	ENSTSYG00000009576	RAB5B	97	85.646
ENSTSYG00000030531	RAB5C	89	41.791	ENSTSYG00000013028	RAB25	93	41.791
ENSTSYG00000030531	RAB5C	90	48.454	ENSTSYG00000034530	-	98	48.454
ENSTSYG00000030531	RAB5C	75	31.902	ENSTSYG00000027718	NRAS	85	31.902
ENSTSYG00000030531	RAB5C	89	36.318	ENSTSYG00000028731	RAB33A	85	36.318
ENSTSYG00000030531	RAB5C	98	83.412	ENSTSYG00000030238	-	98	83.412
ENSTSYG00000030531	RAB5C	90	41.262	ENSTSYG00000031189	RAB11A	94	49.242
ENSTSYG00000030531	RAB5C	75	45.399	ENSTSYG00000000768	RAB41	73	45.399
ENSTSYG00000030531	RAB5C	91	40.816	ENSTSYG00000013951	RAB6A	93	40.816
ENSTSYG00000030531	RAB5C	90	42.512	ENSTSYG00000014758	RAB11B	98	42.439

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000030531	RAB5C	100	99.537	ENSG00000108774	RAB5C	100	100.000	Homo_sapiens
ENSTSYG00000030531	RAB5C	99	89.302	ENSAPOG00000016864	rab5c	98	91.628	Acanthochromis_polyacanthus
ENSTSYG00000030531	RAB5C	100	99.537	ENSAMEG00000006003	RAB5C	100	99.537	Ailuropoda_melanoleuca
ENSTSYG00000030531	RAB5C	99	88.889	ENSACIG00000010896	rab5c	98	90.741	Amphilophus_citrinellus
ENSTSYG00000030531	RAB5C	99	89.352	ENSAOCG00000016614	rab5c	98	91.667	Amphiprion_ocellaris
ENSTSYG00000030531	RAB5C	97	89.100	ENSAPEG00000017868	-	97	91.469	Amphiprion_percula
ENSTSYG00000030531	RAB5C	100	89.908	ENSATEG00000001937	rab5c	100	91.284	Anabas_testudineus
ENSTSYG00000030531	RAB5C	94	99.510	ENSANAG00000025390	RAB5C	100	99.510	Aotus_nancymaae
ENSTSYG00000030531	RAB5C	96	89.573	ENSACLG00000008615	-	99	89.041	Astatotilapia_calliptera
ENSTSYG00000030531	RAB5C	99	87.963	ENSACLG00000002706	rab5c	98	90.741	Astatotilapia_calliptera
ENSTSYG00000030531	RAB5C	99	89.862	ENSAMXG00000043717	rab5c	98	91.705	Astyanax_mexicanus
ENSTSYG00000030531	RAB5C	96	88.571	ENSAMXG00000037267	-	99	90.952	Astyanax_mexicanus
ENSTSYG00000030531	RAB5C	100	99.537	ENSBTAG00000006982	RAB5C	100	99.537	Bos_taurus
ENSTSYG00000030531	RAB5C	99	75.814	WBGene00004268	rab-5	99	75.814	Caenorhabditis_elegans
ENSTSYG00000030531	RAB5C	100	99.074	ENSCAFG00000015629	RAB5C	100	99.074	Canis_familiaris
ENSTSYG00000030531	RAB5C	100	99.074	ENSCAFG00020013537	RAB5C	100	99.074	Canis_lupus_dingo
ENSTSYG00000030531	RAB5C	100	99.537	ENSCHIG00000012960	RAB5C	100	99.537	Capra_hircus
ENSTSYG00000030531	RAB5C	100	99.074	ENSCCAG00000025940	RAB5C	100	99.074	Cebus_capucinus
ENSTSYG00000030531	RAB5C	100	99.537	ENSCATG00000040873	RAB5C	100	99.537	Cercocebus_atys
ENSTSYG00000030531	RAB5C	100	97.685	ENSCLAG00000016650	RAB5C	100	97.685	Chinchilla_lanigera
ENSTSYG00000030531	RAB5C	82	99.438	ENSCHOG00000009886	RAB5C	100	99.438	Choloepus_hoffmanni
ENSTSYG00000030531	RAB5C	99	76.636	ENSCING00000003340	-	99	76.636	Ciona_intestinalis
ENSTSYG00000030531	RAB5C	99	75.000	ENSCSAVG00000000613	-	99	83.333	Ciona_savignyi
ENSTSYG00000030531	RAB5C	100	98.611	ENSCGRG00001014226	Rab5c	100	98.611	Cricetulus_griseus_chok1gshd
ENSTSYG00000030531	RAB5C	100	98.611	ENSCGRG00000007534	Rab5c	100	98.611	Cricetulus_griseus_crigri
ENSTSYG00000030531	RAB5C	99	91.204	ENSCSEG00000017024	rab5c	98	91.204	Cynoglossus_semilaevis
ENSTSYG00000030531	RAB5C	99	89.352	ENSCVAG00000009550	rab5c	98	91.204	Cyprinodon_variegatus
ENSTSYG00000030531	RAB5C	100	99.074	ENSDNOG00000038853	RAB5C	100	99.074	Dasypus_novemcinctus
ENSTSYG00000030531	RAB5C	100	99.074	ENSDORG00000006819	Rab5c	100	99.074	Dipodomys_ordii
ENSTSYG00000030531	RAB5C	99	74.648	FBgn0014010	Rab5	95	74.648	Drosophila_melanogaster
ENSTSYG00000030531	RAB5C	99	79.535	ENSEBUG00000014794	rab5c	100	79.535	Eptatretus_burgeri
ENSTSYG00000030531	RAB5C	100	99.537	ENSEASG00005009281	RAB5C	100	99.537	Equus_asinus_asinus
ENSTSYG00000030531	RAB5C	100	100.000	ENSECAG00000025054	RAB5C	100	100.000	Equus_caballus
ENSTSYG00000030531	RAB5C	100	99.537	ENSEEUG00000002790	RAB5C	100	99.537	Erinaceus_europaeus
ENSTSYG00000030531	RAB5C	99	88.426	ENSELUG00000010439	-	98	88.426	Esox_lucius
ENSTSYG00000030531	RAB5C	99	87.963	ENSELUG00000018516	rab5c	99	90.278	Esox_lucius
ENSTSYG00000030531	RAB5C	100	99.537	ENSFCAG00000002148	RAB5C	100	99.537	Felis_catus
ENSTSYG00000030531	RAB5C	100	95.833	ENSFDAG00000021541	RAB5C	100	95.833	Fukomys_damarensis
ENSTSYG00000030531	RAB5C	99	91.244	ENSFHEG00000015268	-	99	91.244	Fundulus_heteroclitus
ENSTSYG00000030531	RAB5C	99	89.352	ENSFHEG00000012117	rab5c	98	91.204	Fundulus_heteroclitus
ENSTSYG00000030531	RAB5C	99	87.963	ENSGMOG00000015096	rab5c	98	90.741	Gadus_morhua
ENSTSYG00000030531	RAB5C	78	88.166	ENSGMOG00000001876	-	98	88.166	Gadus_morhua
ENSTSYG00000030531	RAB5C	99	89.815	ENSGAFG00000000884	rab5c	98	91.667	Gambusia_affinis
ENSTSYG00000030531	RAB5C	96	91.429	ENSGAFG00000003642	-	99	88.636	Gambusia_affinis
ENSTSYG00000030531	RAB5C	87	94.681	ENSGACG00000008659	rab5c	98	87.037	Gasterosteus_aculeatus
ENSTSYG00000030531	RAB5C	100	99.537	ENSGGOG00000005472	RAB5C	100	99.537	Gorilla_gorilla
ENSTSYG00000030531	RAB5C	99	87.963	ENSHBUG00000002014	rab5c	98	90.741	Haplochromis_burtoni
ENSTSYG00000030531	RAB5C	96	89.573	ENSHBUG00000006823	-	99	89.041	Haplochromis_burtoni
ENSTSYG00000030531	RAB5C	100	95.370	ENSHGLG00000012067	RAB5C	100	95.370	Heterocephalus_glaber_female
ENSTSYG00000030531	RAB5C	99	89.862	ENSHCOG00000004662	rab5c	97	91.244	Hippocampus_comes
ENSTSYG00000030531	RAB5C	97	82.075	ENSHCOG00000020238	-	100	80.455	Hippocampus_comes
ENSTSYG00000030531	RAB5C	96	87.619	ENSIPUG00000020082	rab5c	98	88.532	Ictalurus_punctatus
ENSTSYG00000030531	RAB5C	100	98.148	ENSSTOG00000006620	RAB5C	100	98.148	Ictidomys_tridecemlineatus
ENSTSYG00000030531	RAB5C	100	99.537	ENSJJAG00000021181	Rab5c	100	99.537	Jaculus_jaculus
ENSTSYG00000030531	RAB5C	99	88.889	ENSKMAG00000020038	rab5c	98	91.204	Kryptolebias_marmoratus
ENSTSYG00000030531	RAB5C	99	88.479	ENSKMAG00000017417	-	99	88.479	Kryptolebias_marmoratus
ENSTSYG00000030531	RAB5C	100	88.073	ENSLBEG00000010408	-	99	88.073	Labrus_bergylta
ENSTSYG00000030531	RAB5C	99	90.278	ENSLBEG00000004128	rab5c	98	92.130	Labrus_bergylta
ENSTSYG00000030531	RAB5C	99	93.458	ENSLOCG00000012566	rab5c	100	93.458	Lepisosteus_oculatus
ENSTSYG00000030531	RAB5C	100	99.537	ENSMFAG00000039627	RAB5C	100	99.537	Macaca_fascicularis
ENSTSYG00000030531	RAB5C	100	99.537	ENSMNEG00000000355	RAB5C	100	99.537	Macaca_nemestrina
ENSTSYG00000030531	RAB5C	99	88.426	ENSMAMG00000022322	rab5c	98	90.741	Mastacembelus_armatus
ENSTSYG00000030531	RAB5C	99	88.479	ENSMAMG00000016207	-	99	88.479	Mastacembelus_armatus
ENSTSYG00000030531	RAB5C	99	87.963	ENSMZEG00005022735	rab5c	98	90.741	Maylandia_zebra
ENSTSYG00000030531	RAB5C	96	89.573	ENSMZEG00005021090	-	99	89.041	Maylandia_zebra
ENSTSYG00000030531	RAB5C	100	99.537	ENSMAUG00000015005	Rab5c	100	99.537	Mesocricetus_auratus
ENSTSYG00000030531	RAB5C	100	99.537	ENSMICG00000041608	RAB5C	100	99.537	Microcebus_murinus
ENSTSYG00000030531	RAB5C	100	98.611	ENSMOCG00000018531	-	100	98.611	Microtus_ochrogaster
ENSTSYG00000030531	RAB5C	100	89.908	ENSMMOG00000020621	rab5c	99	89.908	Mola_mola
ENSTSYG00000030531	RAB5C	99	87.615	ENSMALG00000022348	-	99	87.615	Monopterus_albus
ENSTSYG00000030531	RAB5C	97	84.360	ENSMALG00000006052	rab5c	96	84.186	Monopterus_albus
ENSTSYG00000030531	RAB5C	100	99.074	MGP_CAROLIEiJ_G0017184	Rab5c	100	99.074	Mus_caroli
ENSTSYG00000030531	RAB5C	100	99.074	ENSMUSG00000019173	Rab5c	100	99.074	Mus_musculus
ENSTSYG00000030531	RAB5C	100	99.074	MGP_PahariEiJ_G0018314	Rab5c	100	99.074	Mus_pahari
ENSTSYG00000030531	RAB5C	100	99.074	MGP_SPRETEiJ_G0018027	Rab5c	100	99.074	Mus_spretus
ENSTSYG00000030531	RAB5C	100	99.537	ENSMPUG00000010554	RAB5C	100	99.537	Mustela_putorius_furo
ENSTSYG00000030531	RAB5C	100	98.611	ENSNGAG00000010286	Rab5c	100	98.611	Nannospalax_galili
ENSTSYG00000030531	RAB5C	99	88.889	ENSNBRG00000018165	rab5c	98	91.667	Neolamprologus_brichardi
ENSTSYG00000030531	RAB5C	96	89.573	ENSNBRG00000016922	-	99	89.041	Neolamprologus_brichardi
ENSTSYG00000030531	RAB5C	82	92.697	ENSOPRG00000008255	RAB5C	100	92.697	Ochotona_princeps
ENSTSYG00000030531	RAB5C	100	96.759	ENSODEG00000017920	RAB5C	100	96.759	Octodon_degus
ENSTSYG00000030531	RAB5C	99	88.889	ENSONIG00000001113	rab5c	98	91.667	Oreochromis_niloticus
ENSTSYG00000030531	RAB5C	100	88.532	ENSORLG00000003882	rab5c	100	89.908	Oryzias_latipes
ENSTSYG00000030531	RAB5C	100	89.450	ENSORLG00020008388	rab5c	100	89.450	Oryzias_latipes_hni
ENSTSYG00000030531	RAB5C	100	88.532	ENSORLG00015021900	rab5c	100	89.908	Oryzias_latipes_hsok
ENSTSYG00000030531	RAB5C	100	88.532	ENSOMEG00000023078	rab5c	100	89.908	Oryzias_melastigma
ENSTSYG00000030531	RAB5C	100	99.537	ENSOGAG00000009456	RAB5C	100	99.537	Otolemur_garnettii
ENSTSYG00000030531	RAB5C	100	99.537	ENSOARG00000018768	RAB5C	100	99.537	Ovis_aries
ENSTSYG00000030531	RAB5C	100	99.537	ENSPPAG00000037206	RAB5C	100	99.537	Pan_paniscus
ENSTSYG00000030531	RAB5C	100	99.537	ENSPPRG00000005745	RAB5C	100	99.537	Panthera_pardus
ENSTSYG00000030531	RAB5C	100	99.537	ENSPTIG00000008177	RAB5C	100	99.537	Panthera_tigris_altaica
ENSTSYG00000030531	RAB5C	100	99.537	ENSPTRG00000009194	RAB5C	100	99.537	Pan_troglodytes
ENSTSYG00000030531	RAB5C	99	89.302	ENSPKIG00000001237	-	99	89.302	Paramormyrops_kingsleyae
ENSTSYG00000030531	RAB5C	99	87.963	ENSPKIG00000020112	-	99	87.963	Paramormyrops_kingsleyae
ENSTSYG00000030531	RAB5C	99	86.111	ENSPMGG00000010792	rab5c	97	90.047	Periophthalmus_magnuspinnatus
ENSTSYG00000030531	RAB5C	100	98.611	ENSPEMG00000017971	Rab5c	100	98.611	Peromyscus_maniculatus_bairdii
ENSTSYG00000030531	RAB5C	99	78.829	ENSPMAG00000000008	rab5c	100	78.829	Petromyzon_marinus
ENSTSYG00000030531	RAB5C	99	78.972	ENSPMAG00000007867	rab5c	99	78.972	Petromyzon_marinus
ENSTSYG00000030531	RAB5C	99	79.535	ENSPMAG00000001399	rab5c	100	79.535	Petromyzon_marinus
ENSTSYG00000030531	RAB5C	100	97.685	ENSPCIG00000020225	-	100	97.685	Phascolarctos_cinereus
ENSTSYG00000030531	RAB5C	99	90.323	ENSPLAG00000016333	-	99	90.323	Poecilia_latipinna
ENSTSYG00000030531	RAB5C	99	89.815	ENSPLAG00000004790	rab5c	98	91.667	Poecilia_latipinna
ENSTSYG00000030531	RAB5C	99	89.815	ENSPMEG00000011336	rab5c	98	91.667	Poecilia_mexicana
ENSTSYG00000030531	RAB5C	98	88.732	ENSPMEG00000012614	-	98	89.041	Poecilia_mexicana
ENSTSYG00000030531	RAB5C	87	92.593	ENSPREG00000022167	-	89	93.989	Poecilia_reticulata
ENSTSYG00000030531	RAB5C	99	89.815	ENSPREG00000010146	rab5c	98	91.667	Poecilia_reticulata
ENSTSYG00000030531	RAB5C	100	99.537	ENSPPYG00000008398	RAB5C	100	99.537	Pongo_abelii
ENSTSYG00000030531	RAB5C	100	98.611	ENSPCAG00000016412	RAB5C	100	98.611	Procavia_capensis
ENSTSYG00000030531	RAB5C	100	98.611	ENSPCOG00000026327	RAB5C	100	98.611	Propithecus_coquereli
ENSTSYG00000030531	RAB5C	100	100.000	ENSPVAG00000003867	RAB5C	100	100.000	Pteropus_vampyrus
ENSTSYG00000030531	RAB5C	99	87.963	ENSPNYG00000010615	rab5c	98	90.741	Pundamilia_nyererei
ENSTSYG00000030531	RAB5C	96	89.573	ENSPNYG00000015851	-	99	89.041	Pundamilia_nyererei
ENSTSYG00000030531	RAB5C	99	91.244	ENSPNAG00000028138	rab5c	98	91.244	Pygocentrus_nattereri
ENSTSYG00000030531	RAB5C	97	86.792	ENSPNAG00000002218	-	99	89.151	Pygocentrus_nattereri
ENSTSYG00000030531	RAB5C	100	99.537	ENSRNOG00000018568	Rab5c	100	99.537	Rattus_norvegicus
ENSTSYG00000030531	RAB5C	100	99.537	ENSRBIG00000031376	RAB5C	100	99.537	Rhinopithecus_bieti
ENSTSYG00000030531	RAB5C	100	99.537	ENSRROG00000032895	RAB5C	100	99.537	Rhinopithecus_roxellana
ENSTSYG00000030531	RAB5C	100	99.074	ENSSBOG00000032552	-	100	99.074	Saimiri_boliviensis_boliviensis
ENSTSYG00000030531	RAB5C	100	98.148	ENSSHAG00000005267	-	100	98.148	Sarcophilus_harrisii
ENSTSYG00000030531	RAB5C	99	87.558	ENSSFOG00015009988	-	99	87.558	Scleropages_formosus
ENSTSYG00000030531	RAB5C	96	92.308	ENSSMAG00000007323	rab5c	98	90.278	Scophthalmus_maximus
ENSTSYG00000030531	RAB5C	99	91.667	ENSSDUG00000023008	rab5c	98	91.667	Seriola_dumerili
ENSTSYG00000030531	RAB5C	99	91.204	ENSSLDG00000017771	rab5c	98	91.204	Seriola_lalandi_dorsalis
ENSTSYG00000030531	RAB5C	100	96.296	ENSSPUG00000012950	-	100	96.296	Sphenodon_punctatus
ENSTSYG00000030531	RAB5C	99	89.815	ENSSPAG00000006436	rab5c	98	92.593	Stegastes_partitus
ENSTSYG00000030531	RAB5C	100	99.537	ENSSSCG00000032467	RAB5C	100	99.537	Sus_scrofa
ENSTSYG00000030531	RAB5C	99	87.963	ENSTRUG00000015590	rab5c	98	90.278	Takifugu_rubripes
ENSTSYG00000030531	RAB5C	96	90.909	ENSTNIG00000011711	rab5c	95	90.909	Tetraodon_nigroviridis
ENSTSYG00000030531	RAB5C	100	99.537	ENSTBEG00000007092	RAB5C	100	99.537	Tupaia_belangeri
ENSTSYG00000030531	RAB5C	100	98.611	ENSTTRG00000006673	RAB5C	100	98.611	Tursiops_truncatus
ENSTSYG00000030531	RAB5C	100	99.537	ENSUAMG00000024343	RAB5C	100	99.537	Ursus_americanus
ENSTSYG00000030531	RAB5C	100	99.537	ENSUMAG00000023270	RAB5C	100	99.537	Ursus_maritimus
ENSTSYG00000030531	RAB5C	96	91.905	ENSXCOG00000006300	-	99	89.091	Xiphophorus_couchianus
ENSTSYG00000030531	RAB5C	99	89.352	ENSXCOG00000016788	rab5c	98	91.667	Xiphophorus_couchianus
ENSTSYG00000030531	RAB5C	99	89.815	ENSXMAG00000003266	rab5c	98	91.667	Xiphophorus_maculatus
ENSTSYG00000030531	RAB5C	99	90.783	ENSXMAG00000022179	-	99	90.783	Xiphophorus_maculatus