EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000032882 (Gene tree)
Gene ID: -
Gene Symbol: PSPC1
Alias: FLJ10955|PSP1
Full Name: paraspeckle component 1
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Minus strand
Length: 73295 bases
Position: chrKE950095.1:262520-335814
Accession: 103275850
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000024319	RRM_1	PF00076.22	1.2e-15	1	1
ENSTSYP00000015067	RRM_1	PF00076.22	1.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000048029	PSPC1-202	1323	-	ENSTSYP00000024319	440 (aa)	-	UPI000C2F562A
ENSTSYT00000034880	PSPC1-201	1347	XM_008073252	ENSTSYP00000015067	448 (aa)	-	UPI000C2F63C1
ENSTSYT00000037285	PSPC1-203	927	-	ENSTSYP00000021745	308 (aa)	-	UPI000C2F33E1

Gene Model

Click here to download ENSTSYG00000032882's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000032882's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000032882	PSPC1	84	47.525	ENSTSYG00000037120	-	100	49.614
ENSTSYG00000032882	PSPC1	84	41.432	ENSTSYG00000035106	-	92	43.370
ENSTSYG00000032882	PSPC1	88	44.203	ENSTSYG00000036306	-	64	53.896
ENSTSYG00000032882	PSPC1	90	50.123	ENSTSYG00000007423	-	81	72.185
ENSTSYG00000032882	PSPC1	92	44.472	ENSTSYG00000034207	-	65	51.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000032882	PSPC1	93	85.748	ENSG00000121390	PSPC1	80	88.389	Homo_sapiens
ENSTSYG00000032882	PSPC1	88	62.350	ENSAPOG00000015946	pspc1	76	63.723	Acanthochromis_polyacanthus
ENSTSYG00000032882	PSPC1	93	85.748	ENSAMEG00000017420	PSPC1	77	92.040	Ailuropoda_melanoleuca
ENSTSYG00000032882	PSPC1	88	62.312	ENSACIG00000018695	pspc1	75	60.097	Amphilophus_citrinellus
ENSTSYG00000032882	PSPC1	88	61.814	ENSAOCG00000005279	pspc1	76	62.945	Amphiprion_ocellaris
ENSTSYG00000032882	PSPC1	88	62.927	ENSAPEG00000015927	pspc1	76	63.350	Amphiprion_percula
ENSTSYG00000032882	PSPC1	88	60.957	ENSATEG00000004878	pspc1	75	61.654	Anabas_testudineus
ENSTSYG00000032882	PSPC1	88	85.323	ENSAPLG00000006246	PSPC1	99	87.345	Anas_platyrhynchos
ENSTSYG00000032882	PSPC1	92	49.537	ENSAPLG00000003643	SFPQ	74	50.358	Anas_platyrhynchos
ENSTSYG00000032882	PSPC1	92	48.810	ENSACAG00000013307	-	60	48.449	Anolis_carolinensis
ENSTSYG00000032882	PSPC1	93	79.059	ENSACAG00000002093	PSPC1	76	84.483	Anolis_carolinensis
ENSTSYG00000032882	PSPC1	93	91.176	ENSANAG00000000059	PSPC1	76	95.103	Aotus_nancymaae
ENSTSYG00000032882	PSPC1	88	62.879	ENSACLG00000027220	pspc1	74	61.929	Astatotilapia_calliptera
ENSTSYG00000032882	PSPC1	88	62.590	ENSAMXG00000036881	pspc1	76	63.373	Astyanax_mexicanus
ENSTSYG00000032882	PSPC1	93	90.777	ENSBTAG00000003934	PSPC1	76	94.643	Bos_taurus
ENSTSYG00000032882	PSPC1	93	90.686	ENSCJAG00000004554	PSPC1	79	90.686	Callithrix_jacchus
ENSTSYG00000032882	PSPC1	93	85.748	ENSCAFG00020002009	PSPC1	77	92.040	Canis_lupus_dingo
ENSTSYG00000032882	PSPC1	93	85.511	ENSCHIG00000016708	PSPC1	77	91.791	Capra_hircus
ENSTSYG00000032882	PSPC1	93	85.273	ENSCPOG00000000395	PSPC1	77	91.542	Cavia_porcellus
ENSTSYG00000032882	PSPC1	93	85.511	ENSCCAG00000033498	PSPC1	77	91.791	Cebus_capucinus
ENSTSYG00000032882	PSPC1	93	85.511	ENSCATG00000036434	PSPC1	80	88.152	Cercocebus_atys
ENSTSYG00000032882	PSPC1	89	88.366	ENSCLAG00000005241	PSPC1	91	90.488	Chinchilla_lanigera
ENSTSYG00000032882	PSPC1	93	78.622	ENSCHOG00000008913	PSPC1	76	84.328	Choloepus_hoffmanni
ENSTSYG00000032882	PSPC1	93	81.517	ENSCPBG00000020859	PSPC1	80	83.452	Chrysemys_picta_bellii
ENSTSYG00000032882	PSPC1	99	80.180	ENSCANG00000018948	PSPC1	87	89.057	Colobus_angolensis_palliatus
ENSTSYG00000032882	PSPC1	93	85.036	ENSCGRG00001018368	Pspc1	80	87.678	Cricetulus_griseus_chok1gshd
ENSTSYG00000032882	PSPC1	93	85.036	ENSCGRG00000011724	Pspc1	80	87.678	Cricetulus_griseus_crigri
ENSTSYG00000032882	PSPC1	88	57.946	ENSCVAG00000007679	-	75	59.024	Cyprinodon_variegatus
ENSTSYG00000032882	PSPC1	88	62.621	ENSDARG00000006621	pspc1	99	59.709	Danio_rerio
ENSTSYG00000032882	PSPC1	93	85.036	ENSDNOG00000011078	PSPC1	80	87.678	Dasypus_novemcinctus
ENSTSYG00000032882	PSPC1	88	88.279	ENSDORG00000016050	Pspc1	79	89.731	Dipodomys_ordii
ENSTSYG00000032882	PSPC1	54	100.000	ENSETEG00000000502	-	60	100.000	Echinops_telfairi
ENSTSYG00000032882	PSPC1	93	47.748	ENSEBUG00000003964	-	53	62.126	Eptatretus_burgeri
ENSTSYG00000032882	PSPC1	93	85.748	ENSEASG00005000119	PSPC1	77	92.040	Equus_asinus_asinus
ENSTSYG00000032882	PSPC1	93	85.748	ENSECAG00000017286	PSPC1	77	92.040	Equus_caballus
ENSTSYG00000032882	PSPC1	75	83.838	ENSEEUG00000011288	-	65	83.838	Erinaceus_europaeus
ENSTSYG00000032882	PSPC1	88	63.923	ENSELUG00000003746	pspc1	79	65.429	Esox_lucius
ENSTSYG00000032882	PSPC1	93	85.986	ENSFCAG00000027841	PSPC1	77	92.289	Felis_catus
ENSTSYG00000032882	PSPC1	93	81.991	ENSFALG00000008750	PSPC1	76	87.345	Ficedula_albicollis
ENSTSYG00000032882	PSPC1	93	85.273	ENSFDAG00000002617	PSPC1	82	87.915	Fukomys_damarensis
ENSTSYG00000032882	PSPC1	88	59.569	ENSGMOG00000015074	pspc1	77	51.981	Gadus_morhua
ENSTSYG00000032882	PSPC1	93	81.991	ENSGALG00000017142	PSPC1	80	83.924	Gallus_gallus
ENSTSYG00000032882	PSPC1	88	57.673	ENSGACG00000014901	pspc1	74	64.552	Gasterosteus_aculeatus
ENSTSYG00000032882	PSPC1	92	49.306	ENSGAGG00000017325	-	60	49.642	Gopherus_agassizii
ENSTSYG00000032882	PSPC1	93	81.517	ENSGAGG00000019164	PSPC1	80	83.452	Gopherus_agassizii
ENSTSYG00000032882	PSPC1	93	85.511	ENSGGOG00000003414	PSPC1	80	88.152	Gorilla_gorilla
ENSTSYG00000032882	PSPC1	88	62.899	ENSHBUG00000001139	pspc1	75	63.725	Haplochromis_burtoni
ENSTSYG00000032882	PSPC1	93	85.273	ENSHGLG00000018811	PSPC1	77	91.542	Heterocephalus_glaber_female
ENSTSYG00000032882	PSPC1	50	92.202	ENSHGLG00100007962	PSPC1	61	100.000	Heterocephalus_glaber_male
ENSTSYG00000032882	PSPC1	70	60.991	ENSHCOG00000013251	pspc1	69	63.057	Hippocampus_comes
ENSTSYG00000032882	PSPC1	88	65.937	ENSIPUG00000013192	pspc1	80	66.744	Ictalurus_punctatus
ENSTSYG00000032882	PSPC1	93	85.273	ENSSTOG00000026833	PSPC1	80	87.915	Ictidomys_tridecemlineatus
ENSTSYG00000032882	PSPC1	93	85.036	ENSJJAG00000018334	Pspc1	80	87.678	Jaculus_jaculus
ENSTSYG00000032882	PSPC1	88	50.513	ENSKMAG00000013525	-	70	50.513	Kryptolebias_marmoratus
ENSTSYG00000032882	PSPC1	90	60.599	ENSLBEG00000004474	pspc1	75	57.538	Labrus_bergylta
ENSTSYG00000032882	PSPC1	93	71.158	ENSLACG00000010762	PSPC1	79	74.048	Latimeria_chalumnae
ENSTSYG00000032882	PSPC1	88	77.057	ENSLOCG00000010832	pspc1	82	75.240	Lepisosteus_oculatus
ENSTSYG00000032882	PSPC1	93	87.234	ENSLAFG00000010968	PSPC1	80	88.389	Loxodonta_africana
ENSTSYG00000032882	PSPC1	93	85.511	ENSMFAG00000032728	PSPC1	80	88.152	Macaca_fascicularis
ENSTSYG00000032882	PSPC1	93	85.511	ENSMMUG00000020262	PSPC1	80	88.152	Macaca_mulatta
ENSTSYG00000032882	PSPC1	93	85.511	ENSMNEG00000027401	PSPC1	80	88.152	Macaca_nemestrina
ENSTSYG00000032882	PSPC1	88	89.027	ENSMLEG00000039043	PSPC1	97	89.614	Mandrillus_leucophaeus
ENSTSYG00000032882	PSPC1	88	67.677	ENSMAMG00000004333	pspc1	74	65.990	Mastacembelus_armatus
ENSTSYG00000032882	PSPC1	88	62.879	ENSMZEG00005005726	pspc1	74	61.929	Maylandia_zebra
ENSTSYG00000032882	PSPC1	90	83.942	ENSMGAG00000015134	PSPC1	99	87.129	Meleagris_gallopavo
ENSTSYG00000032882	PSPC1	79	88.793	ENSMAUG00000021067	Pspc1	72	93.272	Mesocricetus_auratus
ENSTSYG00000032882	PSPC1	93	85.511	ENSMICG00000013970	PSPC1	77	91.791	Microcebus_murinus
ENSTSYG00000032882	PSPC1	93	85.036	ENSMOCG00000006060	Pspc1	80	87.678	Microtus_ochrogaster
ENSTSYG00000032882	PSPC1	84	83.029	ENSMODG00000008029	PSPC1	58	89.835	Monodelphis_domestica
ENSTSYG00000032882	PSPC1	92	60.190	ENSMALG00000008914	pspc1	78	60.520	Monopterus_albus
ENSTSYG00000032882	PSPC1	93	84.834	MGP_CAROLIEiJ_G0019341	Pspc1	80	87.470	Mus_caroli
ENSTSYG00000032882	PSPC1	93	85.071	ENSMUSG00000021938	Pspc1	80	87.707	Mus_musculus
ENSTSYG00000032882	PSPC1	93	84.834	MGP_PahariEiJ_G0030359	Pspc1	80	87.470	Mus_pahari
ENSTSYG00000032882	PSPC1	93	85.071	MGP_SPRETEiJ_G0020232	Pspc1	80	87.707	Mus_spretus
ENSTSYG00000032882	PSPC1	93	85.748	ENSMPUG00000013347	PSPC1	77	92.040	Mustela_putorius_furo
ENSTSYG00000032882	PSPC1	93	83.726	ENSMLUG00000017663	PSPC1	77	90.864	Myotis_lucifugus
ENSTSYG00000032882	PSPC1	93	85.748	ENSNGAG00000011271	Pspc1	80	88.389	Nannospalax_galili
ENSTSYG00000032882	PSPC1	57	76.078	ENSNBRG00000014059	pspc1	61	76.078	Neolamprologus_brichardi
ENSTSYG00000032882	PSPC1	93	85.748	ENSNLEG00000001294	PSPC1	80	88.389	Nomascus_leucogenys
ENSTSYG00000032882	PSPC1	64	100.000	ENSMEUG00000000476	PSPC1	55	100.000	Notamacropus_eugenii
ENSTSYG00000032882	PSPC1	93	79.097	ENSODEG00000007817	-	79	82.282	Octodon_degus
ENSTSYG00000032882	PSPC1	93	79.469	ENSODEG00000019012	-	80	79.808	Octodon_degus
ENSTSYG00000032882	PSPC1	88	62.654	ENSONIG00000012010	pspc1	75	63.196	Oreochromis_niloticus
ENSTSYG00000032882	PSPC1	88	87.531	ENSOANG00000009017	-	100	90.299	Ornithorhynchus_anatinus
ENSTSYG00000032882	PSPC1	93	65.366	ENSOANG00000011381	-	88	63.048	Ornithorhynchus_anatinus
ENSTSYG00000032882	PSPC1	93	85.511	ENSOCUG00000006153	PSPC1	80	88.152	Oryctolagus_cuniculus
ENSTSYG00000032882	PSPC1	88	62.935	ENSORLG00000004232	-	75	61.576	Oryzias_latipes
ENSTSYG00000032882	PSPC1	88	63.433	ENSORLG00020000578	PSPC1	75	62.750	Oryzias_latipes_hni
ENSTSYG00000032882	PSPC1	88	63.433	ENSORLG00015017480	pspc1	75	63.250	Oryzias_latipes_hsok
ENSTSYG00000032882	PSPC1	93	85.986	ENSOGAG00000012643	PSPC1	80	88.626	Otolemur_garnettii
ENSTSYG00000032882	PSPC1	93	85.816	ENSOARG00000014163	PSPC1	83	92.040	Ovis_aries
ENSTSYG00000032882	PSPC1	93	89.951	ENSPPAG00000009836	PSPC1	87	89.951	Pan_paniscus
ENSTSYG00000032882	PSPC1	93	85.986	ENSPPRG00000008833	PSPC1	77	92.289	Panthera_pardus
ENSTSYG00000032882	PSPC1	99	80.525	ENSPTIG00000016917	PSPC1	95	82.969	Panthera_tigris_altaica
ENSTSYG00000032882	PSPC1	91	87.970	ENSPTRG00000005677	PSPC1	78	87.970	Pan_troglodytes
ENSTSYG00000032882	PSPC1	93	85.511	ENSPANG00000001992	PSPC1	80	88.152	Papio_anubis
ENSTSYG00000032882	PSPC1	80	70.137	ENSPKIG00000003578	pspc1	80	64.802	Paramormyrops_kingsleyae
ENSTSYG00000032882	PSPC1	93	81.280	ENSPSIG00000005168	PSPC1	76	86.600	Pelodiscus_sinensis
ENSTSYG00000032882	PSPC1	93	85.273	ENSPEMG00000015214	Pspc1	80	87.915	Peromyscus_maniculatus_bairdii
ENSTSYG00000032882	PSPC1	93	84.323	ENSPCIG00000017680	PSPC1	80	86.967	Phascolarctos_cinereus
ENSTSYG00000032882	PSPC1	90	60.238	ENSPFOG00000003362	pspc1	77	61.045	Poecilia_formosa
ENSTSYG00000032882	PSPC1	90	60.238	ENSPLAG00000011540	pspc1	76	61.045	Poecilia_latipinna
ENSTSYG00000032882	PSPC1	90	60.000	ENSPMEG00000008322	pspc1	76	60.808	Poecilia_mexicana
ENSTSYG00000032882	PSPC1	90	60.238	ENSPREG00000007786	pspc1	76	61.045	Poecilia_reticulata
ENSTSYG00000032882	PSPC1	93	85.273	ENSPPYG00000005186	PSPC1	77	91.542	Pongo_abelii
ENSTSYG00000032882	PSPC1	93	80.285	ENSPCOG00000014364	PSPC1	79	82.938	Propithecus_coquereli
ENSTSYG00000032882	PSPC1	93	82.898	ENSPVAG00000005036	PSPC1	77	89.055	Pteropus_vampyrus
ENSTSYG00000032882	PSPC1	88	62.879	ENSPNYG00000008893	pspc1	74	61.929	Pundamilia_nyererei
ENSTSYG00000032882	PSPC1	88	64.059	ENSPNAG00000016511	pspc1	80	64.554	Pygocentrus_nattereri
ENSTSYG00000032882	PSPC1	93	85.036	ENSRNOG00000020782	Pspc1	80	87.678	Rattus_norvegicus
ENSTSYG00000032882	PSPC1	93	85.748	ENSRBIG00000036057	PSPC1	82	92.040	Rhinopithecus_bieti
ENSTSYG00000032882	PSPC1	93	85.748	ENSRROG00000036334	PSPC1	80	88.389	Rhinopithecus_roxellana
ENSTSYG00000032882	PSPC1	99	85.135	ENSSBOG00000028172	PSPC1	93	85.135	Saimiri_boliviensis_boliviensis
ENSTSYG00000032882	PSPC1	93	84.561	ENSSHAG00000004696	PSPC1	80	82.898	Sarcophilus_harrisii
ENSTSYG00000032882	PSPC1	80	74.859	ENSSFOG00015001395	pspc1	85	68.395	Scleropages_formosus
ENSTSYG00000032882	PSPC1	88	58.950	ENSSMAG00000001761	pspc1	67	69.118	Scophthalmus_maximus
ENSTSYG00000032882	PSPC1	88	61.201	ENSSDUG00000010651	pspc1	67	65.891	Seriola_dumerili
ENSTSYG00000032882	PSPC1	88	64.631	ENSSLDG00000004284	pspc1	73	62.060	Seriola_lalandi_dorsalis
ENSTSYG00000032882	PSPC1	93	82.816	ENSSARG00000000888	PSPC1	77	90.476	Sorex_araneus
ENSTSYG00000032882	PSPC1	93	79.419	ENSSPUG00000008550	PSPC1	75	83.590	Sphenodon_punctatus
ENSTSYG00000032882	PSPC1	88	60.941	ENSSPAG00000001921	pspc1	76	60.047	Stegastes_partitus
ENSTSYG00000032882	PSPC1	93	85.748	ENSSSCG00000009569	PSPC1	77	92.040	Sus_scrofa
ENSTSYG00000032882	PSPC1	93	81.991	ENSTGUG00000011295	PSPC1	86	87.345	Taeniopygia_guttata
ENSTSYG00000032882	PSPC1	88	53.589	ENSTRUG00000011335	pspc1	75	56.311	Takifugu_rubripes
ENSTSYG00000032882	PSPC1	88	55.981	ENSTNIG00000010358	pspc1	75	58.867	Tetraodon_nigroviridis
ENSTSYG00000032882	PSPC1	88	73.317	ENSTBEG00000002361	PSPC1	77	74.876	Tupaia_belangeri
ENSTSYG00000032882	PSPC1	93	85.748	ENSTTRG00000003343	PSPC1	77	92.040	Tursiops_truncatus
ENSTSYG00000032882	PSPC1	50	92.202	ENSUAMG00000012309	PSPC1	57	100.000	Ursus_americanus
ENSTSYG00000032882	PSPC1	93	85.511	ENSUMAG00000013993	PSPC1	82	91.791	Ursus_maritimus
ENSTSYG00000032882	PSPC1	88	88.778	ENSVPAG00000010029	PSPC1	100	91.542	Vicugna_pacos
ENSTSYG00000032882	PSPC1	93	85.748	ENSVVUG00000006414	PSPC1	77	92.040	Vulpes_vulpes
ENSTSYG00000032882	PSPC1	59	65.818	ENSXCOG00000017438	pspc1	62	69.663	Xiphophorus_couchianus
ENSTSYG00000032882	PSPC1	59	66.182	ENSXMAG00000007929	pspc1	62	70.037	Xiphophorus_maculatus