EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000032894 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Minus strand
Length: 2278 bases
Position: chrKE930613.1:198793-201070
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000023224	APOBEC_N	PF08210.11	8.8e-40	1	1
ENSTSYP00000018363	APOBEC_N	PF08210.11	1.7e-39	1	1
ENSTSYP00000023224	APOBEC_C	PF05240.14	3.3e-26	1	1
ENSTSYP00000018363	APOBEC_C	PF05240.14	6.8e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000044060	-	543	-	ENSTSYP00000023224	181 (aa)	-	UPI000C2F4FA6
ENSTSYT00000049279	-	507	-	ENSTSYP00000018363	169 (aa)	-	UPI000C2F4993

Gene Model

Click here to download ENSTSYG00000032894's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000032894's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000032894	-	92	30.178	ENSTSYG00000008206	APOBEC2	72	32.941
ENSTSYG00000032894	-	60	30.357	ENSTSYG00000029141	APOBEC1	79	30.357
ENSTSYG00000032894	-	96	33.714	ENSTSYG00000028254	-	94	33.714
ENSTSYG00000032894	-	100	36.517	ENSTSYG00000011304	AICDA	88	36.517
ENSTSYG00000032894	-	99	33.908	ENSTSYG00000034260	-	93	33.908
ENSTSYG00000032894	-	99	36.559	ENSTSYG00000035593	-	91	36.559

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000032894	-	100	51.124	ENSG00000100298	APOBEC3H	98	51.124	Homo_sapiens
ENSTSYG00000032894	-	99	50.000	ENSAMEG00000010818	-	74	50.000	Ailuropoda_melanoleuca
ENSTSYG00000032894	-	100	53.846	ENSANAG00000025410	APOBEC3H	81	53.846	Aotus_nancymaae
ENSTSYG00000032894	-	100	52.299	ENSBTAG00000007755	APOBEC3H	88	52.299	Bos_taurus
ENSTSYG00000032894	-	100	51.124	ENSCJAG00000012524	APOBEC3H	89	51.124	Callithrix_jacchus
ENSTSYG00000032894	-	99	53.757	ENSCAFG00000001361	APOBEC3Z3	90	53.757	Canis_familiaris
ENSTSYG00000032894	-	99	53.179	ENSCAFG00020002584	-	90	53.179	Canis_lupus_dingo
ENSTSYG00000032894	-	100	53.448	ENSCHIG00000026580	-	90	53.448	Capra_hircus
ENSTSYG00000032894	-	100	51.724	ENSCPOG00000009257	-	80	51.724	Cavia_porcellus
ENSTSYG00000032894	-	100	52.486	ENSCCAG00000008525	APOBEC3H	89	54.676	Cebus_capucinus
ENSTSYG00000032894	-	100	51.685	ENSCATG00000030302	APOBEC3H	98	51.685	Cercocebus_atys
ENSTSYG00000032894	-	99	50.575	ENSCLAG00000016615	-	86	50.575	Chinchilla_lanigera
ENSTSYG00000032894	-	100	52.247	ENSCSAG00000006371	APOBEC3H	84	52.247	Chlorocebus_sabaeus
ENSTSYG00000032894	-	100	51.705	ENSCGRG00001022976	Apobec3	82	51.705	Cricetulus_griseus_chok1gshd
ENSTSYG00000032894	-	100	51.705	ENSCGRG00000005621	Apobec3	82	51.705	Cricetulus_griseus_crigri
ENSTSYG00000032894	-	100	57.542	ENSDORG00000027271	-	86	57.542	Dipodomys_ordii
ENSTSYG00000032894	-	100	56.897	ENSECAG00000007726	APOBEC3H	75	56.897	Equus_caballus
ENSTSYG00000032894	-	99	53.757	ENSFCAG00000005251	APOBEC3Z3	90	53.757	Felis_catus
ENSTSYG00000032894	-	100	51.429	ENSSTOG00000007125	-	84	51.429	Ictidomys_tridecemlineatus
ENSTSYG00000032894	-	92	54.815	ENSJJAG00000016840	-	78	54.815	Jaculus_jaculus
ENSTSYG00000032894	-	100	54.386	ENSLAFG00000027404	-	93	54.386	Loxodonta_africana
ENSTSYG00000032894	-	100	51.685	ENSMFAG00000031827	APOBEC3H	99	48.684	Macaca_fascicularis
ENSTSYG00000032894	-	100	51.685	ENSMMUG00000001016	APOBEC3H	99	48.684	Macaca_mulatta
ENSTSYG00000032894	-	100	51.685	ENSMNEG00000039259	APOBEC3H	99	48.684	Macaca_nemestrina
ENSTSYG00000032894	-	100	51.685	ENSMLEG00000033417	APOBEC3H	99	48.684	Mandrillus_leucophaeus
ENSTSYG00000032894	-	100	49.153	ENSMAUG00000011683	Apobec3	84	49.153	Mesocricetus_auratus
ENSTSYG00000032894	-	100	50.286	ENSMOCG00000021576	Apobec3	82	50.286	Microtus_ochrogaster
ENSTSYG00000032894	-	94	48.795	MGP_CAROLIEiJ_G0020029	Apobec3	98	42.169	Mus_caroli
ENSTSYG00000032894	-	94	50.909	ENSMUSG00000009585	Apobec3	99	49.000	Mus_musculus
ENSTSYG00000032894	-	100	49.721	MGP_PahariEiJ_G0020031	-	85	49.721	Mus_pahari
ENSTSYG00000032894	-	100	50.000	MGP_SPRETEiJ_G0020927	Apobec3	98	42.169	Mus_spretus
ENSTSYG00000032894	-	99	56.471	ENSMPUG00000013239	-	83	56.471	Mustela_putorius_furo
ENSTSYG00000032894	-	99	49.419	ENSNGAG00000018998	Apobec3	86	49.419	Nannospalax_galili
ENSTSYG00000032894	-	100	51.124	ENSNLEG00000015218	-	85	50.273	Nomascus_leucogenys
ENSTSYG00000032894	-	100	41.618	ENSOCUG00000023913	-	88	39.444	Oryctolagus_cuniculus
ENSTSYG00000032894	-	100	54.023	ENSOARG00000016290	APOBEC3F	91	54.023	Ovis_aries
ENSTSYG00000032894	-	100	51.124	ENSPPAG00000036522	APOBEC3H	97	51.124	Pan_paniscus
ENSTSYG00000032894	-	85	38.816	ENSPPRG00000003675	-	79	38.961	Panthera_pardus
ENSTSYG00000032894	-	99	54.023	ENSPPRG00000003941	-	90	54.023	Panthera_pardus
ENSTSYG00000032894	-	99	54.023	ENSPTIG00000010283	-	90	54.023	Panthera_tigris_altaica
ENSTSYG00000032894	-	100	51.124	ENSPTRG00000014390	APOBEC3H	97	51.124	Pan_troglodytes
ENSTSYG00000032894	-	100	52.247	ENSPANG00000010774	APOBEC3H	93	50.562	Papio_anubis
ENSTSYG00000032894	-	100	48.864	ENSPEMG00000000456	Apobec3	77	48.864	Peromyscus_maniculatus_bairdii
ENSTSYG00000032894	-	100	52.247	ENSPPYG00000011834	-	84	52.247	Pongo_abelii
ENSTSYG00000032894	-	100	44.186	ENSPCAG00000015655	-	98	44.186	Procavia_capensis
ENSTSYG00000032894	-	100	56.069	ENSPVAG00000009462	-	98	56.069	Pteropus_vampyrus
ENSTSYG00000032894	-	76	36.154	ENSPVAG00000024161	-	98	36.154	Pteropus_vampyrus
ENSTSYG00000032894	-	76	34.615	ENSPVAG00000024267	-	98	34.615	Pteropus_vampyrus
ENSTSYG00000032894	-	100	51.977	ENSRNOG00000016852	Apobec3	85	51.977	Rattus_norvegicus
ENSTSYG00000032894	-	100	50.562	ENSRBIG00000029088	APOBEC3H	99	48.026	Rhinopithecus_bieti
ENSTSYG00000032894	-	100	51.124	ENSRROG00000024699	APOBEC3H	99	48.026	Rhinopithecus_roxellana
ENSTSYG00000032894	-	100	53.333	ENSSBOG00000030005	APOBEC3H	98	53.623	Saimiri_boliviensis_boliviensis
ENSTSYG00000032894	-	100	53.448	ENSSSCG00000000091	APOBEC3B	79	53.448	Sus_scrofa
ENSTSYG00000032894	-	96	53.939	ENSTBEG00000001532	-	98	53.939	Tupaia_belangeri
ENSTSYG00000032894	-	100	53.448	ENSTTRG00000001266	-	98	53.448	Tursiops_truncatus
ENSTSYG00000032894	-	99	52.222	ENSUAMG00000004427	-	81	52.222	Ursus_americanus
ENSTSYG00000032894	-	99	53.757	ENSUMAG00000014435	-	89	53.757	Ursus_maritimus
ENSTSYG00000032894	-	72	54.098	ENSVPAG00000011108	-	96	54.098	Vicugna_pacos