EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTSYG00000033618 (Gene tree)
Gene ID: -
Gene Symbol: SF1
Alias: ZCCHC25|ZFM1|ZNF162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Plus strand
Length: 16163 bases
Position: chrKE930099.1:41375-57537
Accession: 103250524
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000023686	KH_1	PF00013.29	1e-07	1	1
ENSTSYP00000026929	KH_1	PF00013.29	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000036784	SF1-203	321	-	ENSTSYP00000014996	106 (aa)	-	UPI000C2F4B0F
ENSTSYT00000039627	SF1-201	1119	-	ENSTSYP00000026929	372 (aa)	-	UPI000C2F7689
ENSTSYT00000047355	SF1-202	1026	XM_008049119	ENSTSYP00000023686	341 (aa)	-	UPI000C2F7774

Gene Model

Click here to download ENSTSYG00000033618's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000033618's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000033618	SF1	98	98.925	ENSANAG00000026664	-	82	98.925	Aotus_nancymaae
ENSTSYG00000033618	SF1	91	90.000	ENSANAG00000022607	-	66	86.331	Aotus_nancymaae
ENSTSYG00000033618	SF1	84	89.825	ENSACLG00000007633	sf1	62	73.566	Astatotilapia_calliptera
ENSTSYG00000033618	SF1	82	98.925	ENSBTAG00000001035	SF1	51	98.925	Bos_taurus
ENSTSYG00000033618	SF1	82	98.925	ENSCHIG00000025867	SF1	56	98.925	Capra_hircus
ENSTSYG00000033618	SF1	88	99.281	ENSCAPG00000010762	SF1	54	99.281	Cavia_aperea
ENSTSYG00000033618	SF1	82	99.281	ENSCPOG00000012290	SF1	57	99.281	Cavia_porcellus
ENSTSYG00000033618	SF1	98	98.925	ENSCCAG00000037881	SF1	82	98.925	Cebus_capucinus
ENSTSYG00000033618	SF1	84	87.500	ENSCCAG00000023781	-	65	87.500	Cebus_capucinus
ENSTSYG00000033618	SF1	98	98.925	ENSCATG00000011564	SF1	82	98.925	Cercocebus_atys
ENSTSYG00000033618	SF1	88	98.925	ENSCSAG00000007258	SF1	56	98.925	Chlorocebus_sabaeus
ENSTSYG00000033618	SF1	86	98.333	ENSCHOG00000006008	SF1	54	92.308	Choloepus_hoffmanni
ENSTSYG00000033618	SF1	82	98.925	ENSCPBG00000023763	SF1	53	77.641	Chrysemys_picta_bellii
ENSTSYG00000033618	SF1	80	70.696	ENSCING00000005564	-	55	70.696	Ciona_intestinalis
ENSTSYG00000033618	SF1	80	71.429	ENSCSAVG00000009055	-	50	74.286	Ciona_savignyi
ENSTSYG00000033618	SF1	98	98.925	ENSCANG00000042201	SF1	82	98.925	Colobus_angolensis_palliatus
ENSTSYG00000033618	SF1	88	100.000	ENSCGRG00001003677	Sf1	53	98.566	Cricetulus_griseus_chok1gshd
ENSTSYG00000033618	SF1	89	100.000	ENSCGRG00000001708	Sf1	57	98.221	Cricetulus_griseus_crigri
ENSTSYG00000033618	SF1	82	93.190	ENSCVAG00000001670	sf1	63	73.300	Cyprinodon_variegatus
ENSTSYG00000033618	SF1	82	99.283	ENSDNOG00000001282	SF1	51	99.283	Dasypus_novemcinctus
ENSTSYG00000033618	SF1	82	98.566	ENSEASG00005018272	SF1	56	98.566	Equus_asinus_asinus
ENSTSYG00000033618	SF1	82	98.925	ENSECAG00000024544	SF1	56	98.925	Equus_caballus
ENSTSYG00000033618	SF1	75	99.574	ENSEEUG00000001058	SF1	66	99.574	Erinaceus_europaeus
ENSTSYG00000033618	SF1	82	99.281	ENSFDAG00000009833	SF1	54	99.281	Fukomys_damarensis
ENSTSYG00000033618	SF1	81	91.273	ENSGMOG00000007469	sf1	50	91.273	Gadus_morhua
ENSTSYG00000033618	SF1	84	91.579	ENSGAFG00000019284	sf1	54	91.579	Gambusia_affinis
ENSTSYG00000033618	SF1	82	98.925	ENSHGLG00000009541	SF1	53	98.925	Heterocephalus_glaber_female
ENSTSYG00000033618	SF1	91	91.667	ENSHGLG00100008255	-	70	85.305	Heterocephalus_glaber_male
ENSTSYG00000033618	SF1	74	92.126	ENSHGLG00100008076	-	77	77.112	Heterocephalus_glaber_male
ENSTSYG00000033618	SF1	82	99.281	ENSHGLG00100013879	-	54	99.281	Heterocephalus_glaber_male
ENSTSYG00000033618	SF1	82	85.305	ENSSTOG00000024353	-	54	92.308	Ictidomys_tridecemlineatus
ENSTSYG00000033618	SF1	83	85.563	ENSLACG00000018493	SF1	61	86.738	Latimeria_chalumnae
ENSTSYG00000033618	SF1	91	98.039	ENSLAFG00000007201	SF1	57	98.566	Loxodonta_africana
ENSTSYG00000033618	SF1	98	98.925	ENSMFAG00000033122	SF1	82	98.925	Macaca_fascicularis
ENSTSYG00000033618	SF1	89	98.925	ENSMMUG00000022606	SF1	74	98.925	Macaca_mulatta
ENSTSYG00000033618	SF1	98	98.925	ENSMNEG00000037901	SF1	82	98.925	Macaca_nemestrina
ENSTSYG00000033618	SF1	98	99.286	ENSMLEG00000040706	SF1	82	99.286	Mandrillus_leucophaeus
ENSTSYG00000033618	SF1	88	100.000	ENSMAUG00000014064	Sf1	53	98.566	Mesocricetus_auratus
ENSTSYG00000033618	SF1	98	98.571	ENSMICG00000001202	SF1	82	98.571	Microcebus_murinus
ENSTSYG00000033618	SF1	88	100.000	ENSMOCG00000022038	Sf1	53	98.566	Microtus_ochrogaster
ENSTSYG00000033618	SF1	82	90.036	ENSMMOG00000020474	sf1	60	70.443	Mola_mola
ENSTSYG00000033618	SF1	88	100.000	ENSMODG00000029407	SF1	66	99.283	Monodelphis_domestica
ENSTSYG00000033618	SF1	88	100.000	MGP_CAROLIEiJ_G0022607	Sf1	99	99.240	Mus_caroli
ENSTSYG00000033618	SF1	88	100.000	ENSMUSG00000024949	Sf1	99	99.240	Mus_musculus
ENSTSYG00000033618	SF1	88	100.000	MGP_PahariEiJ_G0014101	Sf1	99	99.240	Mus_pahari
ENSTSYG00000033618	SF1	88	100.000	MGP_SPRETEiJ_G0023518	Sf1	99	99.240	Mus_spretus
ENSTSYG00000033618	SF1	92	94.265	ENSMLUG00000029800	-	59	94.265	Myotis_lucifugus
ENSTSYG00000033618	SF1	88	100.000	ENSNGAG00000005550	Sf1	53	98.925	Nannospalax_galili
ENSTSYG00000033618	SF1	84	89.825	ENSNBRG00000017606	sf1	61	73.566	Neolamprologus_brichardi
ENSTSYG00000033618	SF1	98	98.925	ENSNLEG00000005236	-	82	98.925	Nomascus_leucogenys
ENSTSYG00000033618	SF1	86	100.000	ENSMEUG00000013424	SF1	51	99.265	Notamacropus_eugenii
ENSTSYG00000033618	SF1	75	99.574	ENSOPRG00000005008	SF1	53	99.574	Ochotona_princeps
ENSTSYG00000033618	SF1	62	99.526	ENSOANG00000002909	SF1	53	99.526	Ornithorhynchus_anatinus
ENSTSYG00000033618	SF1	81	93.455	ENSORLG00000011853	sf1	59	71.535	Oryzias_latipes
ENSTSYG00000033618	SF1	81	93.455	ENSORLG00020011834	sf1	59	71.535	Oryzias_latipes_hni
ENSTSYG00000033618	SF1	81	93.455	ENSORLG00015012855	sf1	59	71.535	Oryzias_latipes_hsok
ENSTSYG00000033618	SF1	82	98.925	ENSOARG00000009166	SF1	53	98.925	Ovis_aries
ENSTSYG00000033618	SF1	98	98.925	ENSPPAG00000002799	-	83	98.925	Pan_paniscus
ENSTSYG00000033618	SF1	82	98.925	ENSPTIG00000016141	SF1	55	98.925	Panthera_tigris_altaica
ENSTSYG00000033618	SF1	98	98.925	ENSPTRG00000003846	SF1	82	98.925	Pan_troglodytes
ENSTSYG00000033618	SF1	98	98.925	ENSPANG00000020754	SF1	82	98.925	Papio_anubis
ENSTSYG00000033618	SF1	71	92.857	ENSPKIG00000012116	sf1	56	89.908	Paramormyrops_kingsleyae
ENSTSYG00000033618	SF1	88	100.000	ENSPEMG00000010463	Sf1	53	98.566	Peromyscus_maniculatus_bairdii
ENSTSYG00000033618	SF1	82	93.190	ENSPFOG00000013683	sf1	67	72.818	Poecilia_formosa
ENSTSYG00000033618	SF1	88	98.925	ENSPPYG00000003098	-	58	98.925	Pongo_abelii
ENSTSYG00000033618	SF1	98	98.571	ENSPCOG00000027546	SF1	82	98.571	Propithecus_coquereli
ENSTSYG00000033618	SF1	88	100.000	ENSRNOG00000021085	Sf1	50	96.154	Rattus_norvegicus
ENSTSYG00000033618	SF1	98	98.925	ENSRBIG00000042818	SF1	82	98.925	Rhinopithecus_bieti
ENSTSYG00000033618	SF1	98	99.286	ENSRROG00000045655	SF1	82	99.286	Rhinopithecus_roxellana
ENSTSYG00000033618	SF1	82	43.878	YLR116W	MSL5	60	43.878	Saccharomyces_cerevisiae
ENSTSYG00000033618	SF1	91	73.096	ENSSBOG00000022267	-	97	72.194	Saimiri_boliviensis_boliviensis
ENSTSYG00000033618	SF1	85	96.564	ENSSHAG00000006841	SF1	54	96.564	Sarcophilus_harrisii
ENSTSYG00000033618	SF1	91	96.667	ENSSARG00000008180	SF1	59	93.548	Sorex_araneus
ENSTSYG00000033618	SF1	71	98.479	ENSSPUG00000012907	SF1	69	74.696	Sphenodon_punctatus
ENSTSYG00000033618	SF1	82	98.925	ENSSSCG00000013021	SF1	51	98.925	Sus_scrofa
ENSTSYG00000033618	SF1	85	77.003	ENSTNIG00000004820	sf1	54	78.049	Tetraodon_nigroviridis
ENSTSYG00000033618	SF1	92	99.281	ENSTBEG00000013133	SF1	50	99.281	Tupaia_belangeri
ENSTSYG00000033618	SF1	91	98.361	ENSTTRG00000008857	SF1	63	93.939	Tursiops_truncatus
ENSTSYG00000033618	SF1	51	99.425	ENSUAMG00000011977	SF1	58	77.181	Ursus_americanus
ENSTSYG00000033618	SF1	82	98.925	ENSUMAG00000007268	SF1	59	98.925	Ursus_maritimus
ENSTSYG00000033618	SF1	84	99.197	ENSVPAG00000011912	SF1	58	99.197	Vicugna_pacos
ENSTSYG00000033618	SF1	82	98.925	ENSVVUG00000028585	SF1	56	98.925	Vulpes_vulpes
ENSTSYG00000033618	SF1	80	94.161	ENSXCOG00000003704	sf1	76	72.250	Xiphophorus_couchianus