EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000034260 (Gene tree)
Gene ID: 103250986
Gene Symbol: -
Alias: -
Full Name: DNA dC->dU-editing enzyme APOBEC-3C-like
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Minus strand
Length: 7253 bases
Position: chrKE930613.1:214220-221472
Accession: 103250986
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000018841	APOBEC_N	PF08210.11	2.7e-93	1	2
ENSTSYP00000018841	APOBEC_N	PF08210.11	2.7e-93	2	2
ENSTSYP00000018841	APOBEC_C	PF05240.14	2.1e-62	1	2
ENSTSYP00000018841	APOBEC_C	PF05240.14	2.1e-62	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000039879	-	1116	XM_021708335	ENSTSYP00000018841	371 (aa)	XP_021564010	UPI000C2F4D0E

Gene Model

Click here to download ENSTSYG00000034260's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000034260's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000034260	-	98	75.676	ENSTSYG00000028254	-	100	75.676
ENSTSYG00000034260	-	96	39.106	ENSTSYG00000011304	AICDA	90	39.106
ENSTSYG00000034260	-	99	32.663	ENSTSYG00000008206	APOBEC2	86	32.663
ENSTSYG00000034260	-	99	36.170	ENSTSYG00000035593	-	96	36.170
ENSTSYG00000034260	-	98	57.065	ENSTSYG00000030036	-	100	57.065
ENSTSYG00000034260	-	93	33.908	ENSTSYG00000032894	-	99	33.908

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000034260	-	98	52.381	ENSG00000244509	APOBEC3C	100	52.381	Homo_sapiens
ENSTSYG00000034260	-	97	51.323	ENSG00000243811	APOBEC3D	100	51.323	Homo_sapiens
ENSTSYG00000034260	-	99	52.419	ENSG00000128394	APOBEC3F	99	52.419	Homo_sapiens
ENSTSYG00000034260	-	99	54.497	ENSANAG00000030088	-	97	53.571	Aotus_nancymaae
ENSTSYG00000034260	-	69	59.055	ENSCJAG00000015317	-	100	59.055	Callithrix_jacchus
ENSTSYG00000034260	-	99	45.161	ENSCAFG00020002615	-	100	45.161	Canis_lupus_dingo
ENSTSYG00000034260	-	97	55.000	ENSCCAG00000030932	-	86	55.000	Cebus_capucinus
ENSTSYG00000034260	-	97	56.044	ENSCATG00000033502	-	99	51.499	Cercocebus_atys
ENSTSYG00000034260	-	98	52.198	ENSCATG00000043226	APOBEC3C	99	52.198	Cercocebus_atys
ENSTSYG00000034260	-	98	53.297	ENSCSAG00000006382	APOBEC3F	99	53.297	Chlorocebus_sabaeus
ENSTSYG00000034260	-	98	50.273	ENSCSAG00000006402	APOBEC3C	100	50.273	Chlorocebus_sabaeus
ENSTSYG00000034260	-	97	54.444	ENSCANG00000033269	-	98	54.444	Colobus_angolensis_palliatus
ENSTSYG00000034260	-	98	54.496	ENSCANG00000032904	-	98	54.496	Colobus_angolensis_palliatus
ENSTSYG00000034260	-	99	52.660	ENSCANG00000039177	APOBEC3C	98	52.660	Colobus_angolensis_palliatus
ENSTSYG00000034260	-	98	53.951	ENSCANG00000031957	-	99	53.951	Colobus_angolensis_palliatus
ENSTSYG00000034260	-	97	34.795	ENSDNOG00000044642	-	99	34.795	Dasypus_novemcinctus
ENSTSYG00000034260	-	98	43.590	ENSEASG00005018641	-	96	43.590	Equus_asinus_asinus
ENSTSYG00000034260	-	98	45.109	ENSECAG00000006071	-	100	43.288	Equus_caballus
ENSTSYG00000034260	-	98	51.852	ENSGGOG00000036587	-	100	51.852	Gorilla_gorilla
ENSTSYG00000034260	-	97	53.022	ENSGGOG00000038678	APOBEC3F	99	53.022	Gorilla_gorilla
ENSTSYG00000034260	-	98	44.565	ENSHGLG00000017315	-	87	41.530	Heterocephalus_glaber_female
ENSTSYG00000034260	-	98	44.565	ENSHGLG00100003105	-	93	44.565	Heterocephalus_glaber_male
ENSTSYG00000034260	-	98	52.459	ENSMFAG00000004037	APOBEC3F	99	52.459	Macaca_fascicularis
ENSTSYG00000034260	-	98	50.820	ENSMFAG00000016792	APOBEC3C	100	50.820	Macaca_fascicularis
ENSTSYG00000034260	-	98	54.645	ENSMFAG00000002331	-	100	54.645	Macaca_fascicularis
ENSTSYG00000034260	-	98	54.645	ENSMMUG00000004017	APOBEC3F	99	54.645	Macaca_mulatta
ENSTSYG00000034260	-	97	51.099	ENSMMUG00000004018	APOBEC3C	94	51.099	Macaca_mulatta
ENSTSYG00000034260	-	99	50.811	ENSMNEG00000045196	APOBEC3C	99	50.811	Macaca_nemestrina
ENSTSYG00000034260	-	98	54.645	ENSMNEG00000043316	APOBEC3D	100	54.645	Macaca_nemestrina
ENSTSYG00000034260	-	98	53.005	ENSMLEG00000029642	APOBEC3F	99	53.005	Mandrillus_leucophaeus
ENSTSYG00000034260	-	98	53.297	ENSMLEG00000036992	APOBEC3C	99	53.297	Mandrillus_leucophaeus
ENSTSYG00000034260	-	99	50.000	ENSMICG00000042615	-	90	50.000	Microcebus_murinus
ENSTSYG00000034260	-	98	46.774	ENSMLUG00000023676	-	99	46.774	Myotis_lucifugus
ENSTSYG00000034260	-	98	48.413	ENSNLEG00000035811	-	100	48.413	Nomascus_leucogenys
ENSTSYG00000034260	-	97	54.444	ENSNLEG00000028392	APOBEC3C	100	54.444	Nomascus_leucogenys
ENSTSYG00000034260	-	99	47.312	ENSOGAG00000030300	-	99	47.312	Otolemur_garnettii
ENSTSYG00000034260	-	97	48.011	ENSOGAG00000032498	-	99	48.011	Otolemur_garnettii
ENSTSYG00000034260	-	97	46.849	ENSOGAG00000033404	-	99	46.849	Otolemur_garnettii
ENSTSYG00000034260	-	98	51.852	ENSPPAG00000014118	APOBEC3C	100	51.852	Pan_paniscus
ENSTSYG00000034260	-	97	51.852	ENSPPAG00000028218	-	100	51.852	Pan_paniscus
ENSTSYG00000034260	-	98	44.324	ENSPPRG00000003726	-	98	44.324	Panthera_pardus
ENSTSYG00000034260	-	99	52.332	ENSPTRG00000014385	APOBEC3C	100	52.332	Pan_troglodytes
ENSTSYG00000034260	-	97	51.323	ENSPTRG00000041588	APOBEC3D	100	51.323	Pan_troglodytes
ENSTSYG00000034260	-	98	53.439	ENSPANG00000010775	APOBEC3F	100	53.439	Papio_anubis
ENSTSYG00000034260	-	98	51.913	ENSPPYG00000011832	APOBEC3C	100	51.913	Pongo_abelii
ENSTSYG00000034260	-	69	56.923	ENSPCOG00000022067	-	98	56.923	Propithecus_coquereli
ENSTSYG00000034260	-	68	56.923	ENSPCOG00000018072	-	98	56.923	Propithecus_coquereli
ENSTSYG00000034260	-	81	45.528	ENSPVAG00000009461	-	73	45.528	Pteropus_vampyrus
ENSTSYG00000034260	-	99	53.968	ENSRBIG00000030323	-	100	53.439	Rhinopithecus_bieti
ENSTSYG00000034260	-	98	49.725	ENSRBIG00000042297	-	99	57.595	Rhinopithecus_bieti
ENSTSYG00000034260	-	99	54.404	ENSRBIG00000030834	-	100	55.000	Rhinopithecus_bieti
ENSTSYG00000034260	-	99	54.404	ENSRROG00000028557	-	100	55.000	Rhinopithecus_roxellana
ENSTSYG00000034260	-	99	54.595	ENSRROG00000029045	APOBEC3C	100	53.439	Rhinopithecus_roxellana
ENSTSYG00000034260	-	98	49.451	ENSRROG00000029996	-	99	49.451	Rhinopithecus_roxellana
ENSTSYG00000034260	-	99	53.684	ENSSBOG00000032780	-	100	53.684	Saimiri_boliviensis_boliviensis
ENSTSYG00000034260	-	95	43.503	ENSUAMG00000004433	-	100	43.503	Ursus_americanus
ENSTSYG00000034260	-	99	43.716	ENSUMAG00000014441	-	87	43.716	Ursus_maritimus
ENSTSYG00000034260	-	77	45.638	ENSVVUG00000014628	-	91	45.205	Vulpes_vulpes