EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000035658 (Gene tree)
Gene ID: 103264645
Gene Symbol: CHD3
Alias: Mi-2a|Mi2-ALPHA|ZFH
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Plus strand
Length: 25874 bases
Position: chrKE941359.1:498528-524401
Accession: 103264645
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000029033	ResIII	PF04851.15	2e-08	1	1
ENSTSYP00000030269	ResIII	PF04851.15	2.1e-08	1	1
ENSTSYP00000034206	ResIII	PF04851.15	2.1e-06	1	1
ENSTSYP00000025157	ResIII	PF04851.15	2.1e-06	1	1
ENSTSYP00000014775	ResIII	PF04851.15	2.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000042422	CHD3-203	6006	XM_008062350	ENSTSYP00000030269	2001 (aa)	-	UPI000B5365A6
ENSTSYT00000027967	CHD3-202	5910	-	ENSTSYP00000014775	1969 (aa)	-	UPI000C2F6AD8
ENSTSYT00000035382	CHD3-205	5904	XM_008062352	ENSTSYP00000029033	1967 (aa)	XP_021570306	UPI000B532762
ENSTSYT00000040849	CHD3-201	7133	XM_021714630	ENSTSYP00000027901	293 (aa)	XP_021570305	UPI000C2F425D
ENSTSYT00000034059	CHD3-204	5916	-	ENSTSYP00000025157	1971 (aa)	-	UPI000C2F76F3
ENSTSYT00000045884	CHD3-206	5421	-	ENSTSYP00000034206	1806 (aa)	-	UPI000C2F3A85

Gene Model

Click here to download ENSTSYG00000035658's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000035658's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000035658	CHD3	95	67.382	ENSTSYG00000006069	-	95	70.635
ENSTSYG00000035658	CHD3	81	68.776	ENSTSYG00000033991	CHD5	98	66.262

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000035658	CHD3	100	99.034	ENSG00000170004	CHD3	100	99.034	Homo_sapiens
ENSTSYG00000035658	CHD3	85	81.481	ENSAPOG00000005614	chd3	94	81.481	Acanthochromis_polyacanthus
ENSTSYG00000035658	CHD3	74	93.791	ENSAMEG00000003025	-	100	97.141	Ailuropoda_melanoleuca
ENSTSYG00000035658	CHD3	86	87.791	ENSACIG00000019671	chd3	98	87.791	Amphilophus_citrinellus
ENSTSYG00000035658	CHD3	91	79.863	ENSAOCG00000023784	chd3	96	87.791	Amphiprion_ocellaris
ENSTSYG00000035658	CHD3	91	79.522	ENSAPEG00000006341	chd3	95	77.792	Amphiprion_percula
ENSTSYG00000035658	CHD3	91	80.969	ENSATEG00000000848	chd3	99	74.364	Anabas_testudineus
ENSTSYG00000035658	CHD3	99	83.055	ENSACAG00000004276	CHD3	96	84.635	Anolis_carolinensis
ENSTSYG00000035658	CHD3	100	95.852	ENSANAG00000034323	CHD3	99	99.041	Aotus_nancymaae
ENSTSYG00000035658	CHD3	93	81.029	ENSACLG00000009222	chd3	99	74.921	Astatotilapia_calliptera
ENSTSYG00000035658	CHD3	98	97.970	ENSBTAG00000014377	CHD3	97	98.021	Bos_taurus
ENSTSYG00000035658	CHD3	99	98.728	ENSCJAG00000014766	CHD3	99	98.728	Callithrix_jacchus
ENSTSYG00000035658	CHD3	100	97.601	ENSCAFG00000016859	CHD3	100	97.601	Canis_familiaris
ENSTSYG00000035658	CHD3	99	95.806	ENSCAFG00020007422	CHD3	100	98.309	Canis_lupus_dingo
ENSTSYG00000035658	CHD3	99	98.282	ENSCHIG00000016737	CHD3	100	98.282	Capra_hircus
ENSTSYG00000035658	CHD3	99	94.782	ENSCAPG00000014864	CHD3	99	94.782	Cavia_aperea
ENSTSYG00000035658	CHD3	99	97.291	ENSCPOG00000022653	CHD3	99	97.291	Cavia_porcellus
ENSTSYG00000035658	CHD3	100	98.501	ENSCCAG00000034792	CHD3	100	98.501	Cebus_capucinus
ENSTSYG00000035658	CHD3	100	98.932	ENSCATG00000041717	CHD3	100	98.932	Cercocebus_atys
ENSTSYG00000035658	CHD3	98	98.448	ENSCLAG00000010523	CHD3	100	98.448	Chinchilla_lanigera
ENSTSYG00000035658	CHD3	98	98.782	ENSCSAG00000011122	CHD3	100	98.782	Chlorocebus_sabaeus
ENSTSYG00000035658	CHD3	92	84.245	ENSCPBG00000011966	CHD3	99	87.627	Chrysemys_picta_bellii
ENSTSYG00000035658	CHD3	100	98.831	ENSCANG00000037641	CHD3	100	98.831	Colobus_angolensis_palliatus
ENSTSYG00000035658	CHD3	98	97.673	ENSCGRG00001011306	Chd3	100	97.673	Cricetulus_griseus_chok1gshd
ENSTSYG00000035658	CHD3	93	96.324	ENSCGRG00000007878	Chd3	99	96.324	Cricetulus_griseus_crigri
ENSTSYG00000035658	CHD3	85	85.776	ENSCSEG00000004489	chd3	99	76.156	Cynoglossus_semilaevis
ENSTSYG00000035658	CHD3	88	82.258	ENSCVAG00000007293	chd3	95	81.673	Cyprinodon_variegatus
ENSTSYG00000035658	CHD3	93	82.215	ENSDARG00000021405	chd3	94	84.502	Danio_rerio
ENSTSYG00000035658	CHD3	98	83.561	ENSDNOG00000047846	CHD3	98	83.409	Dasypus_novemcinctus
ENSTSYG00000035658	CHD3	98	97.931	ENSDORG00000010713	Chd3	100	97.931	Dipodomys_ordii
ENSTSYG00000035658	CHD3	98	90.813	ENSETEG00000017733	CHD3	100	92.060	Echinops_telfairi
ENSTSYG00000035658	CHD3	57	74.840	ENSEBUG00000008310	chd3	99	70.351	Eptatretus_burgeri
ENSTSYG00000035658	CHD3	99	96.133	ENSEASG00005019360	CHD3	100	98.636	Equus_asinus_asinus
ENSTSYG00000035658	CHD3	99	96.187	ENSECAG00000010051	CHD3	100	98.691	Equus_caballus
ENSTSYG00000035658	CHD3	91	98.305	ENSEEUG00000015205	CHD3	92	100.000	Erinaceus_europaeus
ENSTSYG00000035658	CHD3	86	77.049	ENSELUG00000019499	chd3	99	77.311	Esox_lucius
ENSTSYG00000035658	CHD3	98	97.918	ENSFCAG00000009629	CHD3	96	97.918	Felis_catus
ENSTSYG00000035658	CHD3	99	95.806	ENSFDAG00000008220	CHD3	99	95.411	Fukomys_damarensis
ENSTSYG00000035658	CHD3	89	80.305	ENSGMOG00000013599	chd3	91	80.914	Gadus_morhua
ENSTSYG00000035658	CHD3	59	74.915	ENSGAFG00000004055	chd3	99	76.581	Gambusia_affinis
ENSTSYG00000035658	CHD3	99	70.134	ENSGACG00000019275	chd3	100	70.745	Gasterosteus_aculeatus
ENSTSYG00000035658	CHD3	81	82.956	ENSGAGG00000013164	CHD3	98	87.033	Gopherus_agassizii
ENSTSYG00000035658	CHD3	100	98.983	ENSGGOG00000013496	CHD3	100	98.983	Gorilla_gorilla
ENSTSYG00000035658	CHD3	98	98.398	ENSHGLG00000012017	CHD3	99	97.247	Heterocephalus_glaber_female
ENSTSYG00000035658	CHD3	88	90.870	ENSHGLG00100013902	CHD3	99	90.870	Heterocephalus_glaber_male
ENSTSYG00000035658	CHD3	96	72.519	ENSHCOG00000010170	chd3	96	73.306	Hippocampus_comes
ENSTSYG00000035658	CHD3	91	76.446	ENSIPUG00000003271	chd3	96	78.495	Ictalurus_punctatus
ENSTSYG00000035658	CHD3	99	98.249	ENSSTOG00000025907	CHD3	100	98.707	Ictidomys_tridecemlineatus
ENSTSYG00000035658	CHD3	100	96.502	ENSJJAG00000017633	Chd3	100	97.517	Jaculus_jaculus
ENSTSYG00000035658	CHD3	86	90.047	ENSKMAG00000019292	chd3	97	75.862	Kryptolebias_marmoratus
ENSTSYG00000035658	CHD3	98	67.795	ENSLBEG00000028485	chd3	91	87.826	Labrus_bergylta
ENSTSYG00000035658	CHD3	95	75.154	ENSLACG00000008031	CHD3	99	74.028	Latimeria_chalumnae
ENSTSYG00000035658	CHD3	99	76.163	ENSLOCG00000013965	chd3	97	77.381	Lepisosteus_oculatus
ENSTSYG00000035658	CHD3	94	94.277	ENSLAFG00000000572	CHD3	100	94.277	Loxodonta_africana
ENSTSYG00000035658	CHD3	100	98.882	ENSMFAG00000020113	CHD3	100	98.882	Macaca_fascicularis
ENSTSYG00000035658	CHD3	100	96.452	ENSMMUG00000022221	CHD3	100	96.452	Macaca_mulatta
ENSTSYG00000035658	CHD3	100	98.882	ENSMNEG00000001728	CHD3	100	98.882	Macaca_nemestrina
ENSTSYG00000035658	CHD3	100	98.932	ENSMLEG00000032249	CHD3	100	98.932	Mandrillus_leucophaeus
ENSTSYG00000035658	CHD3	92	72.216	ENSMAMG00000000564	chd3	93	87.791	Mastacembelus_armatus
ENSTSYG00000035658	CHD3	98	97.315	ENSMAUG00000013873	Chd3	99	94.533	Mesocricetus_auratus
ENSTSYG00000035658	CHD3	98	98.933	ENSMICG00000008741	CHD3	100	95.464	Microcebus_murinus
ENSTSYG00000035658	CHD3	98	97.719	ENSMOCG00000004848	Chd3	100	97.719	Microtus_ochrogaster
ENSTSYG00000035658	CHD3	98	73.763	ENSMMOG00000012699	chd3	99	74.082	Mola_mola
ENSTSYG00000035658	CHD3	99	90.582	ENSMODG00000007509	CHD3	100	94.611	Monodelphis_domestica
ENSTSYG00000035658	CHD3	98	97.472	MGP_CAROLIEiJ_G0016564	Chd3	100	97.614	Mus_caroli
ENSTSYG00000035658	CHD3	98	97.523	ENSMUSG00000018474	Chd3	99	97.667	Mus_musculus
ENSTSYG00000035658	CHD3	98	97.677	MGP_PahariEiJ_G0017695	Chd3	100	97.825	Mus_pahari
ENSTSYG00000035658	CHD3	98	97.523	MGP_SPRETEiJ_G0017400	Chd3	100	97.667	Mus_spretus
ENSTSYG00000035658	CHD3	93	95.343	ENSMPUG00000008861	CHD3	100	98.016	Mustela_putorius_furo
ENSTSYG00000035658	CHD3	100	96.805	ENSMLUG00000014643	-	100	96.805	Myotis_lucifugus
ENSTSYG00000035658	CHD3	99	97.179	ENSNGAG00000000773	Chd3	99	97.179	Nannospalax_galili
ENSTSYG00000035658	CHD3	92	72.998	ENSNBRG00000000636	chd3	98	75.897	Neolamprologus_brichardi
ENSTSYG00000035658	CHD3	98	96.108	ENSNLEG00000009770	CHD3	100	96.108	Nomascus_leucogenys
ENSTSYG00000035658	CHD3	86	90.962	ENSMEUG00000005852	CHD3	87	91.209	Notamacropus_eugenii
ENSTSYG00000035658	CHD3	99	94.336	ENSOPRG00000011069	CHD3	100	96.903	Ochotona_princeps
ENSTSYG00000035658	CHD3	99	97.437	ENSODEG00000017785	CHD3	100	97.437	Octodon_degus
ENSTSYG00000035658	CHD3	98	73.882	ENSONIG00000009292	chd3	100	74.794	Oreochromis_niloticus
ENSTSYG00000035658	CHD3	98	93.642	ENSOCUG00000029299	CHD3	100	93.543	Oryctolagus_cuniculus
ENSTSYG00000035658	CHD3	84	68.987	ENSORLG00000007107	chd3	93	71.850	Oryzias_latipes
ENSTSYG00000035658	CHD3	57	73.016	ENSORLG00020008387	chd3	95	73.786	Oryzias_latipes_hni
ENSTSYG00000035658	CHD3	75	77.817	ENSOMEG00000013691	chd3	99	77.837	Oryzias_melastigma
ENSTSYG00000035658	CHD3	98	98.426	ENSOGAG00000003216	CHD3	100	98.426	Otolemur_garnettii
ENSTSYG00000035658	CHD3	99	95.407	ENSOARG00000017855	CHD3	99	95.407	Ovis_aries
ENSTSYG00000035658	CHD3	100	96.643	ENSPPAG00000032886	CHD3	100	96.643	Pan_paniscus
ENSTSYG00000035658	CHD3	99	97.406	ENSPPRG00000000626	CHD3	99	97.406	Panthera_pardus
ENSTSYG00000035658	CHD3	100	99.085	ENSPTRG00000008714	CHD3	100	99.085	Pan_troglodytes
ENSTSYG00000035658	CHD3	100	98.851	ENSPANG00000023938	CHD3	100	98.851	Papio_anubis
ENSTSYG00000035658	CHD3	93	80.364	ENSPKIG00000006305	chd3	99	79.183	Paramormyrops_kingsleyae
ENSTSYG00000035658	CHD3	55	90.602	ENSPSIG00000010177	CHD3	98	90.876	Pelodiscus_sinensis
ENSTSYG00000035658	CHD3	99	96.924	ENSPEMG00000014262	Chd3	100	96.924	Peromyscus_maniculatus_bairdii
ENSTSYG00000035658	CHD3	99	93.188	ENSPCIG00000005442	CHD3	98	95.142	Phascolarctos_cinereus
ENSTSYG00000035658	CHD3	94	76.782	ENSPFOG00000012464	chd3	92	73.933	Poecilia_formosa
ENSTSYG00000035658	CHD3	85	87.826	ENSPLAG00000002887	chd3	98	72.343	Poecilia_latipinna
ENSTSYG00000035658	CHD3	53	81.374	ENSPMEG00000016725	chd3	94	73.247	Poecilia_mexicana
ENSTSYG00000035658	CHD3	90	84.502	ENSPREG00000011044	chd3	99	78.236	Poecilia_reticulata
ENSTSYG00000035658	CHD3	100	94.153	ENSPPYG00000007940	CHD3	100	94.153	Pongo_abelii
ENSTSYG00000035658	CHD3	96	98.000	ENSPCAG00000004350	CHD3	96	97.502	Procavia_capensis
ENSTSYG00000035658	CHD3	100	98.102	ENSPCOG00000020952	CHD3	100	98.102	Propithecus_coquereli
ENSTSYG00000035658	CHD3	85	97.108	ENSPVAG00000016344	CHD3	87	97.108	Pteropus_vampyrus
ENSTSYG00000035658	CHD3	94	78.585	ENSPNAG00000020393	chd3	98	82.246	Pygocentrus_nattereri
ENSTSYG00000035658	CHD3	99	94.018	ENSRNOG00000009722	Chd3	100	96.895	Rattus_norvegicus
ENSTSYG00000035658	CHD3	100	95.683	ENSRBIG00000033562	CHD3	100	95.683	Rhinopithecus_bieti
ENSTSYG00000035658	CHD3	100	98.932	ENSRROG00000029554	CHD3	100	98.932	Rhinopithecus_roxellana
ENSTSYG00000035658	CHD3	100	98.678	ENSSBOG00000020719	CHD3	100	98.678	Saimiri_boliviensis_boliviensis
ENSTSYG00000035658	CHD3	98	94.808	ENSSHAG00000014412	CHD3	100	94.808	Sarcophilus_harrisii
ENSTSYG00000035658	CHD3	94	77.186	ENSSFOG00015023123	chd3	98	75.229	Scleropages_formosus
ENSTSYG00000035658	CHD3	85	91.304	ENSSMAG00000006451	chd3	94	87.209	Scophthalmus_maximus
ENSTSYG00000035658	CHD3	56	72.570	ENSSDUG00000005792	chd3	95	73.535	Seriola_dumerili
ENSTSYG00000035658	CHD3	84	87.209	ENSSPAG00000013694	chd3	97	87.209	Stegastes_partitus
ENSTSYG00000035658	CHD3	99	98.225	ENSSSCG00000021363	CHD3	100	98.364	Sus_scrofa
ENSTSYG00000035658	CHD3	75	76.560	ENSTRUG00000014990	chd3	89	76.335	Takifugu_rubripes
ENSTSYG00000035658	CHD3	99	72.017	ENSTNIG00000012998	chd3	100	72.948	Tetraodon_nigroviridis
ENSTSYG00000035658	CHD3	68	100.000	ENSTBEG00000011454	-	71	100.000	Tupaia_belangeri
ENSTSYG00000035658	CHD3	99	99.468	ENSTTRG00000010295	CHD3	97	98.479	Tursiops_truncatus
ENSTSYG00000035658	CHD3	99	94.628	ENSUAMG00000005475	CHD3	99	97.169	Ursus_americanus
ENSTSYG00000035658	CHD3	59	100.000	ENSVPAG00000010794	-	62	100.000	Vicugna_pacos
ENSTSYG00000035658	CHD3	99	95.806	ENSVVUG00000028011	CHD3	99	98.189	Vulpes_vulpes
ENSTSYG00000035658	CHD3	99	71.972	ENSXETG00000012991	chd3	92	73.963	Xenopus_tropicalis
ENSTSYG00000035658	CHD3	52	82.864	ENSXCOG00000000809	chd3	96	83.089	Xiphophorus_couchianus
ENSTSYG00000035658	CHD3	84	86.705	ENSXMAG00000016035	chd3	99	86.705	Xiphophorus_maculatus