EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000036351 (Gene tree)
Gene ID: 103253320
Gene Symbol: PABPC5
Alias: -
Full Name: poly(A) binding protein cytoplasmic 5
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Plus strand
Length: 1149 bases
Position: chrKE933529.1:22097-23245
Accession: 103253320
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000024525	RRM_5	PF13893.6	1.1e-12	1	3
ENSTSYP00000024525	RRM_5	PF13893.6	1.1e-12	2	3
ENSTSYP00000024525	RRM_5	PF13893.6	1.1e-12	3	3
ENSTSYP00000024525	RRM_1	PF00076.22	1.3e-78	1	4
ENSTSYP00000024525	RRM_1	PF00076.22	1.3e-78	2	4
ENSTSYP00000024525	RRM_1	PF00076.22	1.3e-78	3	4
ENSTSYP00000024525	RRM_1	PF00076.22	1.3e-78	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000037133	PABPC5-201	1149	XM_008051672	ENSTSYP00000024525	382 (aa)	XP_008049863	A0A1U7T0G9

Gene Model

Click here to download ENSTSYG00000036351's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000036351's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000036351	PABPC5	95	65.840	ENSTSYG00000004229	PABPC1	57	66.011
ENSTSYG00000036351	PABPC5	95	61.813	ENSTSYG00000033737	-	76	62.079
ENSTSYG00000036351	PABPC5	96	58.856	ENSTSYG00000037130	-	88	58.889
ENSTSYG00000036351	PABPC5	96	59.452	ENSTSYG00000006645	PABPC1L	59	59.497
ENSTSYG00000036351	PABPC5	95	67.769	ENSTSYG00000006532	PABPC4	58	67.978
ENSTSYG00000036351	PABPC5	97	35.802	ENSTSYG00000013066	ELAVL2	87	35.802
ENSTSYG00000036351	PABPC5	93	60.204	ENSTSYG00000001775	-	98	59.896

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000036351	PABPC5	99	97.900	ENSG00000174740	PABPC5	99	97.900	Homo_sapiens
ENSTSYG00000036351	PABPC5	99	96.850	ENSAMEG00000020114	PABPC5	100	96.850	Ailuropoda_melanoleuca
ENSTSYG00000036351	PABPC5	99	97.900	ENSANAG00000005063	PABPC5	99	97.900	Aotus_nancymaae
ENSTSYG00000036351	PABPC5	100	96.335	ENSBTAG00000019942	PABPC5	100	96.335	Bos_taurus
ENSTSYG00000036351	PABPC5	99	97.375	ENSCJAG00000003665	PABPC5	99	97.375	Callithrix_jacchus
ENSTSYG00000036351	PABPC5	100	96.859	ENSCAFG00000017452	PABPC5	100	96.859	Canis_familiaris
ENSTSYG00000036351	PABPC5	100	96.335	ENSCHIG00000019004	PABPC5	100	96.335	Capra_hircus
ENSTSYG00000036351	PABPC5	99	87.958	ENSCAPG00000010714	PABPC5	100	87.958	Cavia_aperea
ENSTSYG00000036351	PABPC5	100	93.717	ENSCPOG00000002555	PABPC5	100	93.717	Cavia_porcellus
ENSTSYG00000036351	PABPC5	99	97.900	ENSCCAG00000032154	PABPC5	99	97.900	Cebus_capucinus
ENSTSYG00000036351	PABPC5	99	97.638	ENSCATG00000043083	PABPC5	99	97.638	Cercocebus_atys
ENSTSYG00000036351	PABPC5	100	95.026	ENSCLAG00000000647	PABPC5	100	95.026	Chinchilla_lanigera
ENSTSYG00000036351	PABPC5	99	97.638	ENSCSAG00000000065	PABPC5	99	97.638	Chlorocebus_sabaeus
ENSTSYG00000036351	PABPC5	99	97.638	ENSCANG00000011473	PABPC5	99	97.638	Colobus_angolensis_palliatus
ENSTSYG00000036351	PABPC5	100	93.717	ENSCGRG00000018699	Pabpc5	100	93.717	Cricetulus_griseus_crigri
ENSTSYG00000036351	PABPC5	100	78.590	ENSETEG00000011832	PABPC5	100	78.590	Echinops_telfairi
ENSTSYG00000036351	PABPC5	100	97.120	ENSEASG00005014396	PABPC5	100	97.120	Equus_asinus_asinus
ENSTSYG00000036351	PABPC5	100	97.120	ENSECAG00000003452	PABPC5	100	97.120	Equus_caballus
ENSTSYG00000036351	PABPC5	100	96.597	ENSFCAG00000004998	PABPC5	100	96.597	Felis_catus
ENSTSYG00000036351	PABPC5	100	95.812	ENSFDAG00000000126	PABPC5	100	95.812	Fukomys_damarensis
ENSTSYG00000036351	PABPC5	99	97.900	ENSGGOG00000007622	PABPC5	99	97.900	Gorilla_gorilla
ENSTSYG00000036351	PABPC5	95	96.330	ENSJJAG00000011960	Pabpc5	100	96.330	Jaculus_jaculus
ENSTSYG00000036351	PABPC5	99	97.638	ENSMFAG00000024561	PABPC5	99	97.638	Macaca_fascicularis
ENSTSYG00000036351	PABPC5	99	97.638	ENSMMUG00000011562	PABPC5	99	97.638	Macaca_mulatta
ENSTSYG00000036351	PABPC5	99	97.638	ENSMNEG00000037604	PABPC5	99	97.638	Macaca_nemestrina
ENSTSYG00000036351	PABPC5	99	97.638	ENSMLEG00000028318	PABPC5	99	97.638	Mandrillus_leucophaeus
ENSTSYG00000036351	PABPC5	100	96.073	ENSMICG00000041706	PABPC5	100	96.073	Microcebus_murinus
ENSTSYG00000036351	PABPC5	100	95.288	ENSMOCG00000001554	Pabpc5	100	95.288	Microtus_ochrogaster
ENSTSYG00000036351	PABPC5	99	94.211	MGP_CAROLIEiJ_G0033367	Pabpc5	99	94.211	Mus_caroli
ENSTSYG00000036351	PABPC5	99	94.737	ENSMUSG00000034732	Pabpc5	99	94.737	Mus_musculus
ENSTSYG00000036351	PABPC5	100	95.026	MGP_PahariEiJ_G0031908	Pabpc5	100	95.026	Mus_pahari
ENSTSYG00000036351	PABPC5	99	94.737	MGP_SPRETEiJ_G0034533	Pabpc5	99	94.737	Mus_spretus
ENSTSYG00000036351	PABPC5	100	95.812	ENSMPUG00000018465	PABPC5	100	95.812	Mustela_putorius_furo
ENSTSYG00000036351	PABPC5	100	95.812	ENSMLUG00000008244	PABPC5	100	95.812	Myotis_lucifugus
ENSTSYG00000036351	PABPC5	95	95.413	ENSNGAG00000004371	Pabpc5	100	95.413	Nannospalax_galili
ENSTSYG00000036351	PABPC5	99	97.900	ENSNLEG00000035086	PABPC5	99	97.900	Nomascus_leucogenys
ENSTSYG00000036351	PABPC5	98	97.738	ENSOPRG00000000856	PABPC5	100	97.738	Ochotona_princeps
ENSTSYG00000036351	PABPC5	100	97.382	ENSOCUG00000010919	PABPC5	100	97.382	Oryctolagus_cuniculus
ENSTSYG00000036351	PABPC5	100	96.335	ENSOGAG00000006882	PABPC5	100	96.335	Otolemur_garnettii
ENSTSYG00000036351	PABPC5	100	96.597	ENSOARG00000010260	PABPC5	100	96.597	Ovis_aries
ENSTSYG00000036351	PABPC5	99	97.638	ENSPPAG00000007378	PABPC5	99	97.638	Pan_paniscus
ENSTSYG00000036351	PABPC5	100	96.597	ENSPPRG00000010742	PABPC5	100	96.597	Panthera_pardus
ENSTSYG00000036351	PABPC5	100	96.597	ENSPTIG00000001480	PABPC5	100	96.597	Panthera_tigris_altaica
ENSTSYG00000036351	PABPC5	99	97.900	ENSPTRG00000022078	PABPC5	99	97.900	Pan_troglodytes
ENSTSYG00000036351	PABPC5	99	97.638	ENSPANG00000018282	PABPC5	99	97.638	Papio_anubis
ENSTSYG00000036351	PABPC5	100	94.764	ENSPEMG00000000171	Pabpc5	100	94.764	Peromyscus_maniculatus_bairdii
ENSTSYG00000036351	PABPC5	99	97.900	ENSPPYG00000020526	PABPC5	99	97.900	Pongo_abelii
ENSTSYG00000036351	PABPC5	99	97.455	ENSPCAG00000015577	PABPC5	100	97.455	Procavia_capensis
ENSTSYG00000036351	PABPC5	100	96.859	ENSPCOG00000000676	PABPC5	100	96.859	Propithecus_coquereli
ENSTSYG00000036351	PABPC5	100	97.382	ENSPVAG00000006465	PABPC5	100	97.382	Pteropus_vampyrus
ENSTSYG00000036351	PABPC5	100	94.764	ENSRNOG00000003354	Pabpc5	100	94.764	Rattus_norvegicus
ENSTSYG00000036351	PABPC5	99	97.638	ENSRBIG00000011760	PABPC5	99	97.638	Rhinopithecus_bieti
ENSTSYG00000036351	PABPC5	99	97.638	ENSRROG00000036708	PABPC5	99	97.638	Rhinopithecus_roxellana
ENSTSYG00000036351	PABPC5	99	97.638	ENSSBOG00000008658	PABPC5	99	97.638	Saimiri_boliviensis_boliviensis
ENSTSYG00000036351	PABPC5	100	93.717	ENSSARG00000014012	PABPC5	100	93.717	Sorex_araneus
ENSTSYG00000036351	PABPC5	100	96.335	ENSSSCG00000040194	PABPC5	100	96.335	Sus_scrofa
ENSTSYG00000036351	PABPC5	100	97.644	ENSTBEG00000016482	PABPC5	100	97.644	Tupaia_belangeri
ENSTSYG00000036351	PABPC5	100	96.335	ENSUAMG00000013627	PABPC5	100	96.335	Ursus_americanus
ENSTSYG00000036351	PABPC5	100	96.073	ENSUMAG00000023934	PABPC5	100	96.073	Ursus_maritimus
ENSTSYG00000036351	PABPC5	100	97.120	ENSVPAG00000001063	PABPC5	100	97.120	Vicugna_pacos
ENSTSYG00000036351	PABPC5	100	97.120	ENSVVUG00000013172	PABPC5	100	97.120	Vulpes_vulpes