EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000036502 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein F
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Minus strand
Length: 293 bases
Position: chrKE940132.1:172180-172472
Accession: 103261915
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000032602	LSM	PF01423.22	1.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000046056	-	258	XM_008059501	ENSTSYP00000032602	85 (aa)	XP_008057692	UPI000C2F42E0

Gene Model

Click here to download ENSTSYG00000036502's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000036502's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000036502	-	79	47.826	ENSTSYG00000026972	LSM6	85	47.826
ENSTSYG00000036502	-	94	87.805	ENSTSYG00000031636	-	61	89.189
ENSTSYG00000036502	-	87	80.263	ENSTSYG00000030635	-	87	80.263
ENSTSYG00000036502	-	72	44.444	ENSTSYG00000012759	-	82	44.444

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000036502	-	100	94.253	ENSG00000139343	SNRPF	100	94.253	Homo_sapiens
ENSTSYG00000036502	-	86	92.000	ENSAPOG00000003377	snrpf	58	92.000	Acanthochromis_polyacanthus
ENSTSYG00000036502	-	88	80.519	ENSAMEG00000018718	-	87	81.579	Ailuropoda_melanoleuca
ENSTSYG00000036502	-	99	94.186	ENSAMEG00000002166	-	100	94.186	Ailuropoda_melanoleuca
ENSTSYG00000036502	-	85	91.892	ENSACIG00000013216	snrpf	86	91.892	Amphilophus_citrinellus
ENSTSYG00000036502	-	85	91.892	ENSAOCG00000015108	snrpf	86	91.892	Amphiprion_ocellaris
ENSTSYG00000036502	-	85	91.892	ENSAPEG00000022022	snrpf	86	91.892	Amphiprion_percula
ENSTSYG00000036502	-	85	91.892	ENSATEG00000022625	snrpf	78	91.892	Anabas_testudineus
ENSTSYG00000036502	-	86	92.000	ENSACAG00000014073	SNRPF	85	92.000	Anolis_carolinensis
ENSTSYG00000036502	-	87	70.270	ENSANAG00000025860	-	85	70.270	Aotus_nancymaae
ENSTSYG00000036502	-	100	94.253	ENSANAG00000032845	SNRPF	100	94.253	Aotus_nancymaae
ENSTSYG00000036502	-	82	84.722	ENSANAG00000020297	-	65	84.722	Aotus_nancymaae
ENSTSYG00000036502	-	85	91.892	ENSACLG00000016066	snrpf	86	91.892	Astatotilapia_calliptera
ENSTSYG00000036502	-	87	89.474	ENSAMXG00000007421	snrpf	87	89.474	Astyanax_mexicanus
ENSTSYG00000036502	-	91	87.342	ENSBTAG00000050012	-	93	86.842	Bos_taurus
ENSTSYG00000036502	-	100	94.253	ENSBTAG00000016271	SNRPF	100	94.253	Bos_taurus
ENSTSYG00000036502	-	89	66.667	WBGene00004918	snr-5	85	68.493	Caenorhabditis_elegans
ENSTSYG00000036502	-	100	94.253	ENSCJAG00000002705	-	100	94.253	Callithrix_jacchus
ENSTSYG00000036502	-	85	86.486	ENSCAFG00000031151	-	85	87.838	Canis_familiaris
ENSTSYG00000036502	-	100	94.253	ENSCAFG00000006395	-	77	94.253	Canis_familiaris
ENSTSYG00000036502	-	85	86.486	ENSCAFG00020010823	-	85	87.838	Canis_lupus_dingo
ENSTSYG00000036502	-	91	82.278	ENSCAFG00020013161	-	74	90.141	Canis_lupus_dingo
ENSTSYG00000036502	-	99	94.186	ENSCAPG00000007242	SNRPF	100	94.186	Cavia_aperea
ENSTSYG00000036502	-	100	94.253	ENSCPOG00000013898	SNRPF	100	94.253	Cavia_porcellus
ENSTSYG00000036502	-	100	82.759	ENSCCAG00000033627	-	59	82.895	Cebus_capucinus
ENSTSYG00000036502	-	100	94.253	ENSCCAG00000037378	-	100	94.253	Cebus_capucinus
ENSTSYG00000036502	-	100	93.103	ENSCCAG00000017356	-	87	93.421	Cebus_capucinus
ENSTSYG00000036502	-	100	94.253	ENSCLAG00000007200	SNRPF	100	94.253	Chinchilla_lanigera
ENSTSYG00000036502	-	100	94.253	ENSCSAG00000003602	-	70	94.253	Chlorocebus_sabaeus
ENSTSYG00000036502	-	74	93.846	ENSCHOG00000009392	SNRPF	100	93.846	Choloepus_hoffmanni
ENSTSYG00000036502	-	87	85.526	ENSCPBG00000006227	-	87	85.526	Chrysemys_picta_bellii
ENSTSYG00000036502	-	99	88.372	ENSCPBG00000024287	-	60	89.333	Chrysemys_picta_bellii
ENSTSYG00000036502	-	100	83.908	ENSCPBG00000026463	-	87	84.211	Chrysemys_picta_bellii
ENSTSYG00000036502	-	100	82.759	ENSCPBG00000001985	-	89	84.211	Chrysemys_picta_bellii
ENSTSYG00000036502	-	99	83.721	ENSCSAVG00000007498	-	84	85.333	Ciona_savignyi
ENSTSYG00000036502	-	100	94.253	ENSCGRG00001017100	-	100	94.253	Cricetulus_griseus_chok1gshd
ENSTSYG00000036502	-	87	86.667	ENSCGRG00001008965	-	58	86.667	Cricetulus_griseus_chok1gshd
ENSTSYG00000036502	-	100	94.253	ENSCGRG00000000336	-	100	94.253	Cricetulus_griseus_crigri
ENSTSYG00000036502	-	93	87.500	ENSCGRG00000018878	-	94	86.667	Cricetulus_griseus_crigri
ENSTSYG00000036502	-	87	90.789	ENSCSEG00000004748	snrpf	87	90.789	Cynoglossus_semilaevis
ENSTSYG00000036502	-	86	92.000	ENSCVAG00000000397	snrpf	59	92.000	Cyprinodon_variegatus
ENSTSYG00000036502	-	87	89.744	ENSDARG00000105037	snrpf	88	89.744	Danio_rerio
ENSTSYG00000036502	-	87	78.947	ENSDNOG00000049373	-	65	78.947	Dasypus_novemcinctus
ENSTSYG00000036502	-	87	92.105	ENSDNOG00000048989	-	67	92.105	Dasypus_novemcinctus
ENSTSYG00000036502	-	100	94.253	ENSDNOG00000043775	-	55	94.253	Dasypus_novemcinctus
ENSTSYG00000036502	-	68	90.000	ENSDORG00000029740	-	72	90.000	Dipodomys_ordii
ENSTSYG00000036502	-	84	84.932	ENSDORG00000025351	-	100	84.932	Dipodomys_ordii
ENSTSYG00000036502	-	98	75.294	FBgn0000426	SmF	83	78.378	Drosophila_melanogaster
ENSTSYG00000036502	-	100	94.253	ENSETEG00000001558	-	100	94.253	Echinops_telfairi
ENSTSYG00000036502	-	95	73.494	ENSEBUG00000001793	-	76	80.556	Eptatretus_burgeri
ENSTSYG00000036502	-	100	94.253	ENSECAG00000019817	SNRPF	70	94.253	Equus_caballus
ENSTSYG00000036502	-	99	94.186	ENSEEUG00000013509	SNRPF	100	94.186	Erinaceus_europaeus
ENSTSYG00000036502	-	87	89.474	ENSELUG00000003121	RUXF	87	89.474	Esox_lucius
ENSTSYG00000036502	-	100	87.356	ENSELUG00000007737	RUXF	86	88.158	Esox_lucius
ENSTSYG00000036502	-	100	94.253	ENSFCAG00000029966	-	100	94.253	Felis_catus
ENSTSYG00000036502	-	87	72.368	ENSFCAG00000021942	-	87	72.368	Felis_catus
ENSTSYG00000036502	-	98	72.941	ENSFCAG00000031148	-	69	69.737	Felis_catus
ENSTSYG00000036502	-	99	94.186	ENSFALG00000010799	SNRPF	99	94.186	Ficedula_albicollis
ENSTSYG00000036502	-	100	94.253	ENSFDAG00000002831	-	100	94.253	Fukomys_damarensis
ENSTSYG00000036502	-	86	92.000	ENSFHEG00000003240	snrpf	65	92.000	Fundulus_heteroclitus
ENSTSYG00000036502	-	86	92.000	ENSGMOG00000007741	snrpf	87	92.000	Gadus_morhua
ENSTSYG00000036502	-	100	94.253	ENSGALG00000011409	SNRPF	100	94.253	Gallus_gallus
ENSTSYG00000036502	-	85	91.892	ENSGAFG00000016187	snrpf	84	91.892	Gambusia_affinis
ENSTSYG00000036502	-	86	90.667	ENSGACG00000020055	snrpf	87	90.667	Gasterosteus_aculeatus
ENSTSYG00000036502	-	80	81.429	ENSGAGG00000014132	-	83	81.429	Gopherus_agassizii
ENSTSYG00000036502	-	69	83.607	ENSGAGG00000011163	-	86	86.000	Gopherus_agassizii
ENSTSYG00000036502	-	72	90.476	ENSGAGG00000020974	-	54	87.692	Gopherus_agassizii
ENSTSYG00000036502	-	86	86.667	ENSGAGG00000012945	-	69	88.158	Gopherus_agassizii
ENSTSYG00000036502	-	92	85.000	ENSGAGG00000022991	-	80	86.957	Gopherus_agassizii
ENSTSYG00000036502	-	100	94.253	ENSGGOG00000001127	-	100	94.253	Gorilla_gorilla
ENSTSYG00000036502	-	98	76.471	ENSGGOG00000039936	-	83	73.684	Gorilla_gorilla
ENSTSYG00000036502	-	92	70.513	ENSGGOG00000039564	-	90	68.919	Gorilla_gorilla
ENSTSYG00000036502	-	100	94.253	ENSHGLG00000009108	SNRPF	100	94.253	Heterocephalus_glaber_female
ENSTSYG00000036502	-	87	92.105	ENSHGLG00000021172	-	87	92.105	Heterocephalus_glaber_female
ENSTSYG00000036502	-	99	94.186	ENSHGLG00100008103	-	100	94.186	Heterocephalus_glaber_male
ENSTSYG00000036502	-	87	92.105	ENSHGLG00100019596	-	87	92.105	Heterocephalus_glaber_male
ENSTSYG00000036502	-	73	81.429	ENSHCOG00000018663	snrpf	55	81.429	Hippocampus_comes
ENSTSYG00000036502	-	87	92.105	ENSIPUG00000018994	snrpf	87	92.105	Ictalurus_punctatus
ENSTSYG00000036502	-	100	94.253	ENSSTOG00000010434	-	100	94.253	Ictidomys_tridecemlineatus
ENSTSYG00000036502	-	100	75.862	ENSJJAG00000004558	-	89	76.316	Jaculus_jaculus
ENSTSYG00000036502	-	100	79.310	ENSJJAG00000010502	-	89	80.263	Jaculus_jaculus
ENSTSYG00000036502	-	78	88.235	ENSJJAG00000004828	-	86	89.474	Jaculus_jaculus
ENSTSYG00000036502	-	100	94.253	ENSJJAG00000011272	-	100	94.253	Jaculus_jaculus
ENSTSYG00000036502	-	87	90.789	ENSKMAG00000013566	snrpf	87	90.789	Kryptolebias_marmoratus
ENSTSYG00000036502	-	87	92.105	ENSLBEG00000008800	snrpf	87	92.105	Labrus_bergylta
ENSTSYG00000036502	-	100	93.103	ENSLACG00000002456	-	74	93.103	Latimeria_chalumnae
ENSTSYG00000036502	-	87	89.474	ENSLOCG00000015744	snrpf	87	89.474	Lepisosteus_oculatus
ENSTSYG00000036502	-	99	94.186	ENSLAFG00000017426	SNRPF	99	94.186	Loxodonta_africana
ENSTSYG00000036502	-	85	91.892	ENSMAMG00000016593	snrpf	86	91.892	Mastacembelus_armatus
ENSTSYG00000036502	-	85	91.892	ENSMZEG00005014701	snrpf	86	91.892	Maylandia_zebra
ENSTSYG00000036502	-	98	94.118	ENSMGAG00000011453	-	76	94.118	Meleagris_gallopavo
ENSTSYG00000036502	-	87	89.474	ENSMAUG00000008799	-	87	89.474	Mesocricetus_auratus
ENSTSYG00000036502	-	73	92.188	ENSMAUG00000019737	-	85	92.188	Mesocricetus_auratus
ENSTSYG00000036502	-	96	69.048	ENSMAUG00000010289	-	86	68.493	Mesocricetus_auratus
ENSTSYG00000036502	-	73	92.188	ENSMAUG00000016909	-	85	92.188	Mesocricetus_auratus
ENSTSYG00000036502	-	87	86.842	ENSMICG00000030494	-	60	86.842	Microcebus_murinus
ENSTSYG00000036502	-	100	94.253	ENSMICG00000012153	-	100	94.253	Microcebus_murinus
ENSTSYG00000036502	-	100	94.253	ENSMOCG00000020437	Snrpf	100	94.253	Microtus_ochrogaster
ENSTSYG00000036502	-	87	80.000	ENSMOCG00000022166	-	82	80.000	Microtus_ochrogaster
ENSTSYG00000036502	-	79	77.612	ENSMOCG00000020220	-	87	77.612	Microtus_ochrogaster
ENSTSYG00000036502	-	86	90.667	ENSMMOG00000007127	snrpf	87	90.667	Mola_mola
ENSTSYG00000036502	-	100	94.253	ENSMODG00000008091	SNRPF	75	94.253	Monodelphis_domestica
ENSTSYG00000036502	-	85	91.892	ENSMALG00000012328	snrpf	86	91.892	Monopterus_albus
ENSTSYG00000036502	-	100	94.253	MGP_CAROLIEiJ_G0015735	-	100	94.253	Mus_caroli
ENSTSYG00000036502	-	100	94.253	ENSMUSG00000020018	Snrpf	100	94.253	Mus_musculus
ENSTSYG00000036502	-	100	94.253	MGP_PahariEiJ_G0031350	Snrpf	100	94.253	Mus_pahari
ENSTSYG00000036502	-	100	94.253	MGP_SPRETEiJ_G0016553	Snrpf	100	94.253	Mus_spretus
ENSTSYG00000036502	-	100	94.253	ENSMPUG00000007176	-	77	94.253	Mustela_putorius_furo
ENSTSYG00000036502	-	100	94.253	ENSMLUG00000027932	-	81	94.253	Myotis_lucifugus
ENSTSYG00000036502	-	99	94.186	ENSMLUG00000013577	-	100	94.186	Myotis_lucifugus
ENSTSYG00000036502	-	100	94.253	ENSMLUG00000029201	-	81	94.253	Myotis_lucifugus
ENSTSYG00000036502	-	100	94.253	ENSMLUG00000026149	-	81	94.253	Myotis_lucifugus
ENSTSYG00000036502	-	100	77.011	ENSMLUG00000026269	-	71	75.000	Myotis_lucifugus
ENSTSYG00000036502	-	73	84.375	ENSNGAG00000005851	-	71	83.607	Nannospalax_galili
ENSTSYG00000036502	-	100	94.253	ENSNGAG00000024292	-	100	94.253	Nannospalax_galili
ENSTSYG00000036502	-	86	92.000	ENSNBRG00000011682	snrpf	76	92.000	Neolamprologus_brichardi
ENSTSYG00000036502	-	86	67.568	ENSMEUG00000000671	SNRPF	87	67.568	Notamacropus_eugenii
ENSTSYG00000036502	-	100	94.253	ENSODEG00000010328	-	100	94.253	Octodon_degus
ENSTSYG00000036502	-	100	93.103	ENSOCUG00000010925	SNRPF	76	93.103	Oryctolagus_cuniculus
ENSTSYG00000036502	-	86	89.333	ENSORLG00020008216	snrpf	87	89.333	Oryzias_latipes_hni
ENSTSYG00000036502	-	86	89.333	ENSORLG00015007418	snrpf	87	89.333	Oryzias_latipes_hsok
ENSTSYG00000036502	-	85	90.541	ENSOMEG00000003018	snrpf	86	90.541	Oryzias_melastigma
ENSTSYG00000036502	-	87	92.105	ENSOGAG00000030323	-	87	92.105	Otolemur_garnettii
ENSTSYG00000036502	-	100	94.253	ENSOARG00000011853	-	75	94.253	Ovis_aries
ENSTSYG00000036502	-	92	70.513	ENSPPAG00000037479	-	91	68.919	Pan_paniscus
ENSTSYG00000036502	-	98	76.471	ENSPPAG00000037544	-	83	73.684	Pan_paniscus
ENSTSYG00000036502	-	98	71.765	ENSPPRG00000007449	-	77	71.053	Panthera_pardus
ENSTSYG00000036502	-	100	94.253	ENSPPRG00000005875	-	100	94.253	Panthera_pardus
ENSTSYG00000036502	-	100	94.253	ENSPTIG00000007520	SNRPF	100	94.253	Panthera_tigris_altaica
ENSTSYG00000036502	-	98	74.118	ENSPTIG00000005117	-	89	71.053	Panthera_tigris_altaica
ENSTSYG00000036502	-	98	76.471	ENSPTRG00000043814	-	83	73.684	Pan_troglodytes
ENSTSYG00000036502	-	92	71.795	ENSPTRG00000047717	-	91	70.270	Pan_troglodytes
ENSTSYG00000036502	-	86	92.000	ENSPKIG00000014784	snrpf	81	92.000	Paramormyrops_kingsleyae
ENSTSYG00000036502	-	99	94.186	ENSPSIG00000016462	SNRPF	99	94.186	Pelodiscus_sinensis
ENSTSYG00000036502	-	86	90.667	ENSPMGG00000023548	snrpf	87	90.667	Periophthalmus_magnuspinnatus
ENSTSYG00000036502	-	100	94.253	ENSPEMG00000023326	Snrpf	100	94.253	Peromyscus_maniculatus_bairdii
ENSTSYG00000036502	-	85	91.892	ENSPLAG00000023932	snrpf	86	91.892	Poecilia_latipinna
ENSTSYG00000036502	-	85	91.892	ENSPMEG00000003377	snrpf	86	91.892	Poecilia_mexicana
ENSTSYG00000036502	-	85	91.892	ENSPREG00000022635	snrpf	84	91.892	Poecilia_reticulata
ENSTSYG00000036502	-	100	94.253	ENSPPYG00000004847	-	100	94.253	Pongo_abelii
ENSTSYG00000036502	-	100	94.253	ENSPCOG00000023833	-	100	94.253	Propithecus_coquereli
ENSTSYG00000036502	-	100	94.253	ENSPVAG00000009036	SNRPF	100	94.253	Pteropus_vampyrus
ENSTSYG00000036502	-	85	91.892	ENSPNYG00000021712	snrpf	86	91.892	Pundamilia_nyererei
ENSTSYG00000036502	-	85	90.541	ENSPNAG00000019117	snrpf	86	90.541	Pygocentrus_nattereri
ENSTSYG00000036502	-	100	94.253	ENSRNOG00000005556	Snrpf	100	94.253	Rattus_norvegicus
ENSTSYG00000036502	-	87	90.789	ENSRBIG00000030414	-	87	90.789	Rhinopithecus_bieti
ENSTSYG00000036502	-	87	90.789	ENSRROG00000021975	-	87	90.789	Rhinopithecus_roxellana
ENSTSYG00000036502	-	81	57.534	YPR182W	SMX3	85	56.000	Saccharomyces_cerevisiae
ENSTSYG00000036502	-	87	93.421	ENSSBOG00000012868	-	87	93.421	Saimiri_boliviensis_boliviensis
ENSTSYG00000036502	-	87	78.947	ENSSBOG00000032297	-	86	78.947	Saimiri_boliviensis_boliviensis
ENSTSYG00000036502	-	100	94.253	ENSSBOG00000036179	-	100	94.253	Saimiri_boliviensis_boliviensis
ENSTSYG00000036502	-	87	74.684	ENSSBOG00000027638	-	88	74.684	Saimiri_boliviensis_boliviensis
ENSTSYG00000036502	-	99	94.186	ENSSHAG00000012294	SNRPF	77	94.186	Sarcophilus_harrisii
ENSTSYG00000036502	-	74	92.308	ENSSFOG00015021523	snrpf	96	92.308	Scleropages_formosus
ENSTSYG00000036502	-	87	89.474	ENSSMAG00000005533	snrpf	86	89.474	Scophthalmus_maximus
ENSTSYG00000036502	-	75	92.424	ENSSDUG00000016283	snrpf	77	92.424	Seriola_dumerili
ENSTSYG00000036502	-	87	90.789	ENSSLDG00000005119	snrpf	87	90.789	Seriola_lalandi_dorsalis
ENSTSYG00000036502	-	93	69.136	ENSSLDG00000003885	-	88	73.973	Seriola_lalandi_dorsalis
ENSTSYG00000036502	-	98	94.118	ENSSPUG00000014590	-	99	94.118	Sphenodon_punctatus
ENSTSYG00000036502	-	86	92.000	ENSSPAG00000003283	snrpf	84	92.000	Stegastes_partitus
ENSTSYG00000036502	-	100	94.253	ENSSSCG00000000895	SNRPF	100	94.253	Sus_scrofa
ENSTSYG00000036502	-	67	89.831	ENSTRUG00000014956	snrpf	84	89.831	Takifugu_rubripes
ENSTSYG00000036502	-	87	92.105	ENSTNIG00000012672	snrpf	87	92.105	Tetraodon_nigroviridis
ENSTSYG00000036502	-	87	68.000	ENSTTRG00000006070	SNRPF	87	68.000	Tursiops_truncatus
ENSTSYG00000036502	-	100	94.253	ENSUAMG00000008176	-	100	94.253	Ursus_americanus
ENSTSYG00000036502	-	100	82.759	ENSUAMG00000001101	-	88	84.211	Ursus_americanus
ENSTSYG00000036502	-	100	94.253	ENSUMAG00000003528	-	100	94.253	Ursus_maritimus
ENSTSYG00000036502	-	87	84.211	ENSUMAG00000006177	-	88	84.211	Ursus_maritimus
ENSTSYG00000036502	-	100	94.253	ENSVPAG00000008712	-	100	94.253	Vicugna_pacos
ENSTSYG00000036502	-	91	86.076	ENSVVUG00000023821	-	96	85.526	Vulpes_vulpes
ENSTSYG00000036502	-	86	69.737	ENSXETG00000021630	snrpf	87	69.737	Xenopus_tropicalis
ENSTSYG00000036502	-	85	91.892	ENSXCOG00000013860	snrpf	84	91.892	Xiphophorus_couchianus
ENSTSYG00000036502	-	85	91.892	ENSXMAG00000015448	snrpf	86	91.892	Xiphophorus_maculatus