EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000000096 (Gene tree)
Gene ID: -
Gene Symbol: FUBP1
Alias: FBP|FUBP
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 29898 bases
Position: chrGeneScaffold_2031:631733-661630
Accession: 4004
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000000088	KH_1	PF00013.29	1e-69	1	4
ENSTTRP00000000088	KH_1	PF00013.29	1e-69	2	4
ENSTTRP00000000088	KH_1	PF00013.29	1e-69	3	4
ENSTTRP00000000088	KH_1	PF00013.29	1e-69	4	4
ENSTTRP00000000088	KH_2	PF07650.17	1.1e-22	1	2
ENSTTRP00000000088	KH_2	PF07650.17	1.1e-22	2	2
ENSTTRP00000000088	DUF1897	PF09005.10	4.8e-12	1	2
ENSTTRP00000000088	DUF1897	PF09005.10	4.8e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000000096	FUBP1-201	1968	-	ENSTTRP00000000088	655 (aa)	-	UPI00018B86D3

Gene Model

Click here to download ENSTTRG00000000096's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000000096's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000000096	FUBP1	91	42.974	ENSTTRG00000015138	FUBP3	81	50.877
ENSTTRG00000000096	FUBP1	51	40.625	ENSTTRG00000015075	-	68	30.973
ENSTTRG00000000096	FUBP1	91	59.217	ENSTTRG00000010390	KHSRP	60	66.590

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000000096	FUBP1	100	99.695	ENSG00000162613	FUBP1	100	99.695	Homo_sapiens
ENSTTRG00000000096	FUBP1	100	69.231	ENSAPOG00000014845	fubp1	70	75.652	Acanthochromis_polyacanthus
ENSTTRG00000000096	FUBP1	98	96.396	ENSAMEG00000007372	FUBP1	99	96.396	Ailuropoda_melanoleuca
ENSTTRG00000000096	FUBP1	98	69.278	ENSACIG00000020024	fubp1	69	73.904	Amphilophus_citrinellus
ENSTTRG00000000096	FUBP1	98	68.105	ENSAPEG00000012232	fubp1	72	76.638	Amphiprion_percula
ENSTTRG00000000096	FUBP1	99	71.385	ENSATEG00000018619	fubp1	70	77.753	Anabas_testudineus
ENSTTRG00000000096	FUBP1	92	97.347	ENSAPLG00000005965	FUBP1	100	97.347	Anas_platyrhynchos
ENSTTRG00000000096	FUBP1	98	85.860	ENSACAG00000006310	FUBP1	96	87.135	Anolis_carolinensis
ENSTTRG00000000096	FUBP1	98	71.166	ENSACLG00000006708	fubp1	72	77.974	Astatotilapia_calliptera
ENSTTRG00000000096	FUBP1	87	77.612	ENSAMXG00000005525	fubp1	64	86.337	Astyanax_mexicanus
ENSTTRG00000000096	FUBP1	100	99.542	ENSCJAG00000007062	FUBP1	100	99.542	Callithrix_jacchus
ENSTTRG00000000096	FUBP1	98	99.844	ENSCAFG00000020361	FUBP1	99	99.844	Canis_familiaris
ENSTTRG00000000096	FUBP1	94	99.187	ENSTSYG00000000148	FUBP1	100	99.187	Carlito_syrichta
ENSTTRG00000000096	FUBP1	57	98.535	ENSCAPG00000011052	-	67	98.535	Cavia_aperea
ENSTTRG00000000096	FUBP1	100	98.632	ENSCPOG00000002757	FUBP1	100	98.632	Cavia_porcellus
ENSTTRG00000000096	FUBP1	100	84.682	ENSCCAG00000036537	FUBP1	100	84.971	Cebus_capucinus
ENSTTRG00000000096	FUBP1	100	99.542	ENSCATG00000042126	FUBP1	100	99.542	Cercocebus_atys
ENSTTRG00000000096	FUBP1	100	99.389	ENSCLAG00000005621	FUBP1	100	100.000	Chinchilla_lanigera
ENSTTRG00000000096	FUBP1	98	99.689	ENSCSAG00000001402	FUBP1	99	99.689	Chlorocebus_sabaeus
ENSTTRG00000000096	FUBP1	100	99.237	ENSCHOG00000008177	FUBP1	100	99.237	Choloepus_hoffmanni
ENSTTRG00000000096	FUBP1	100	98.176	ENSCGRG00001007103	Fubp1	100	98.176	Cricetulus_griseus_chok1gshd
ENSTTRG00000000096	FUBP1	94	98.867	ENSCGRG00000003372	Fubp1	100	98.867	Cricetulus_griseus_crigri
ENSTTRG00000000096	FUBP1	98	70.615	ENSCSEG00000021412	fubp1	70	76.316	Cynoglossus_semilaevis
ENSTTRG00000000096	FUBP1	98	68.935	ENSCVAG00000014487	fubp1	60	84.986	Cyprinodon_variegatus
ENSTTRG00000000096	FUBP1	98	69.565	ENSDARG00000029248	fubp1	70	76.774	Danio_rerio
ENSTTRG00000000096	FUBP1	82	56.213	ENSDNOG00000034565	-	83	74.699	Dasypus_novemcinctus
ENSTTRG00000000096	FUBP1	100	99.695	ENSDORG00000016534	Fubp1	100	99.695	Dipodomys_ordii
ENSTTRG00000000096	FUBP1	77	97.983	ENSETEG00000000948	-	62	97.983	Echinops_telfairi
ENSTTRG00000000096	FUBP1	81	47.197	ENSEBUG00000016143	fubp1	64	65.152	Eptatretus_burgeri
ENSTTRG00000000096	FUBP1	100	85.802	ENSEEUG00000001287	FUBP1	100	85.802	Erinaceus_europaeus
ENSTTRG00000000096	FUBP1	98	68.485	ENSELUG00000007990	fubp1	70	74.298	Esox_lucius
ENSTTRG00000000096	FUBP1	98	95.969	ENSFALG00000005768	FUBP1	98	95.969	Ficedula_albicollis
ENSTTRG00000000096	FUBP1	100	99.084	ENSFDAG00000014210	FUBP1	100	100.000	Fukomys_damarensis
ENSTTRG00000000096	FUBP1	98	71.189	ENSFHEG00000005230	fubp1	70	78.384	Fundulus_heteroclitus
ENSTTRG00000000096	FUBP1	98	66.308	ENSGMOG00000003370	fubp1	70	69.956	Gadus_morhua
ENSTTRG00000000096	FUBP1	98	96.589	ENSGALG00000008939	FUBP1	99	96.589	Gallus_gallus
ENSTTRG00000000096	FUBP1	98	69.865	ENSGAFG00000020972	fubp1	91	77.778	Gambusia_affinis
ENSTTRG00000000096	FUBP1	98	70.138	ENSGACG00000016563	fubp1	70	75.877	Gasterosteus_aculeatus
ENSTTRG00000000096	FUBP1	98	70.030	ENSHBUG00000009835	fubp1	85	76.923	Haplochromis_burtoni
ENSTTRG00000000096	FUBP1	99	82.424	ENSHGLG00000002808	-	72	91.228	Heterocephalus_glaber_female
ENSTTRG00000000096	FUBP1	100	98.784	ENSHGLG00000008415	-	100	100.000	Heterocephalus_glaber_female
ENSTTRG00000000096	FUBP1	99	83.030	ENSHGLG00100001414	-	72	91.886	Heterocephalus_glaber_male
ENSTTRG00000000096	FUBP1	100	98.784	ENSHGLG00100003417	-	100	98.784	Heterocephalus_glaber_male
ENSTTRG00000000096	FUBP1	98	68.209	ENSHCOG00000000910	fubp1	70	74.735	Hippocampus_comes
ENSTTRG00000000096	FUBP1	98	74.125	ENSIPUG00000009896	fubp1	70	76.840	Ictalurus_punctatus
ENSTTRG00000000096	FUBP1	100	99.392	ENSSTOG00000014312	FUBP1	100	99.392	Ictidomys_tridecemlineatus
ENSTTRG00000000096	FUBP1	100	96.336	ENSJJAG00000020069	Fubp1	100	100.000	Jaculus_jaculus
ENSTTRG00000000096	FUBP1	98	70.353	ENSKMAG00000018897	fubp1	69	76.432	Kryptolebias_marmoratus
ENSTTRG00000000096	FUBP1	98	67.166	ENSLBEG00000012700	fubp1	72	74.790	Labrus_bergylta
ENSTTRG00000000096	FUBP1	96	71.196	ENSLOCG00000003745	fubp1	92	74.180	Lepisosteus_oculatus
ENSTTRG00000000096	FUBP1	100	96.154	ENSLAFG00000003273	FUBP1	99	98.014	Loxodonta_africana
ENSTTRG00000000096	FUBP1	100	99.542	ENSMFAG00000031825	FUBP1	100	99.542	Macaca_fascicularis
ENSTTRG00000000096	FUBP1	100	99.542	ENSMMUG00000002899	FUBP1	100	99.542	Macaca_mulatta
ENSTTRG00000000096	FUBP1	100	99.542	ENSMNEG00000045212	FUBP1	100	99.542	Macaca_nemestrina
ENSTTRG00000000096	FUBP1	98	71.385	ENSMZEG00005024298	fubp1	70	78.384	Maylandia_zebra
ENSTTRG00000000096	FUBP1	92	96.860	ENSMGAG00000009424	FUBP1	99	96.860	Meleagris_gallopavo
ENSTTRG00000000096	FUBP1	100	98.784	ENSMAUG00000016428	Fubp1	100	98.784	Mesocricetus_auratus
ENSTTRG00000000096	FUBP1	100	98.632	ENSMOCG00000014751	Fubp1	100	98.632	Microtus_ochrogaster
ENSTTRG00000000096	FUBP1	87	73.818	ENSMMOG00000019463	fubp1	64	82.817	Mola_mola
ENSTTRG00000000096	FUBP1	94	91.038	ENSMODG00000020804	FUBP1	100	91.038	Monodelphis_domestica
ENSTTRG00000000096	FUBP1	98	70.489	ENSMALG00000015173	fubp1	70	76.856	Monopterus_albus
ENSTTRG00000000096	FUBP1	100	98.321	MGP_CAROLIEiJ_G0025740	Fubp1	100	98.658	Mus_caroli
ENSTTRG00000000096	FUBP1	100	98.015	ENSMUSG00000028034	Fubp1	100	98.015	Mus_musculus
ENSTTRG00000000096	FUBP1	100	98.779	MGP_PahariEiJ_G0027191	Fubp1	100	98.779	Mus_pahari
ENSTTRG00000000096	FUBP1	100	98.168	MGP_SPRETEiJ_G0026693	Fubp1	100	98.658	Mus_spretus
ENSTTRG00000000096	FUBP1	98	95.217	ENSMLUG00000014802	FUBP1	99	95.217	Myotis_lucifugus
ENSTTRG00000000096	FUBP1	100	94.833	ENSNGAG00000014302	Fubp1	100	98.658	Nannospalax_galili
ENSTTRG00000000096	FUBP1	98	69.302	ENSNBRG00000015099	fubp1	72	77.974	Neolamprologus_brichardi
ENSTTRG00000000096	FUBP1	100	95.738	ENSNLEG00000009772	FUBP1	100	95.738	Nomascus_leucogenys
ENSTTRG00000000096	FUBP1	90	100.000	ENSMEUG00000007917	-	79	100.000	Notamacropus_eugenii
ENSTTRG00000000096	FUBP1	91	98.630	ENSOPRG00000001175	FUBP1	91	98.630	Ochotona_princeps
ENSTTRG00000000096	FUBP1	100	99.237	ENSODEG00000002600	-	100	100.000	Octodon_degus
ENSTTRG00000000096	FUBP1	98	66.978	ENSODEG00000003657	-	99	66.199	Octodon_degus
ENSTTRG00000000096	FUBP1	98	69.985	ENSONIG00000018381	fubp1	69	78.384	Oreochromis_niloticus
ENSTTRG00000000096	FUBP1	87	92.727	ENSOANG00000009777	FUBP1	99	92.562	Ornithorhynchus_anatinus
ENSTTRG00000000096	FUBP1	98	68.896	ENSORLG00000003540	fubp1	71	77.753	Oryzias_latipes
ENSTTRG00000000096	FUBP1	98	69.276	ENSORLG00020005908	fubp1	70	77.093	Oryzias_latipes_hni
ENSTTRG00000000096	FUBP1	98	70.607	ENSORLG00015008779	fubp1	70	77.093	Oryzias_latipes_hsok
ENSTTRG00000000096	FUBP1	98	70.342	ENSOMEG00000021943	fubp1	70	76.211	Oryzias_melastigma
ENSTTRG00000000096	FUBP1	98	95.821	ENSOGAG00000014233	FUBP1	99	95.821	Otolemur_garnettii
ENSTTRG00000000096	FUBP1	98	96.833	ENSOARG00000013259	FUBP1	99	96.682	Ovis_aries
ENSTTRG00000000096	FUBP1	100	99.847	ENSPPRG00000000413	FUBP1	100	99.847	Panthera_pardus
ENSTTRG00000000096	FUBP1	100	99.847	ENSPTIG00000019450	FUBP1	100	99.847	Panthera_tigris_altaica
ENSTTRG00000000096	FUBP1	93	96.072	ENSPSIG00000012965	FUBP1	99	96.791	Pelodiscus_sinensis
ENSTTRG00000000096	FUBP1	98	71.296	ENSPMGG00000009060	fubp1	71	76.739	Periophthalmus_magnuspinnatus
ENSTTRG00000000096	FUBP1	100	97.872	ENSPEMG00000021802	Fubp1	100	99.315	Peromyscus_maniculatus_bairdii
ENSTTRG00000000096	FUBP1	57	62.393	ENSPMAG00000001644	-	90	63.514	Petromyzon_marinus
ENSTTRG00000000096	FUBP1	98	68.000	ENSPLAG00000021170	fubp1	72	78.384	Poecilia_latipinna
ENSTTRG00000000096	FUBP1	98	72.558	ENSPMEG00000004747	fubp1	73	78.384	Poecilia_mexicana
ENSTTRG00000000096	FUBP1	98	71.298	ENSPREG00000017911	fubp1	70	78.384	Poecilia_reticulata
ENSTTRG00000000096	FUBP1	71	99.567	ENSPPYG00000001219	-	70	99.567	Pongo_abelii
ENSTTRG00000000096	FUBP1	100	98.931	ENSPCAG00000012617	FUBP1	100	98.931	Procavia_capensis
ENSTTRG00000000096	FUBP1	100	99.847	ENSPCOG00000024974	FUBP1	100	99.847	Propithecus_coquereli
ENSTTRG00000000096	FUBP1	100	95.420	ENSPVAG00000014637	FUBP1	100	95.420	Pteropus_vampyrus
ENSTTRG00000000096	FUBP1	98	71.210	ENSPNYG00000004552	fubp1	73	78.414	Pundamilia_nyererei
ENSTTRG00000000096	FUBP1	98	72.255	ENSPNAG00000016207	fubp1	87	77.223	Pygocentrus_nattereri
ENSTTRG00000000096	FUBP1	98	98.142	ENSRNOG00000043370	Fubp1	99	98.142	Rattus_norvegicus
ENSTTRG00000000096	FUBP1	98	99.689	ENSRBIG00000042950	FUBP1	99	99.689	Rhinopithecus_bieti
ENSTTRG00000000096	FUBP1	98	99.689	ENSRROG00000043534	FUBP1	99	99.689	Rhinopithecus_roxellana
ENSTTRG00000000096	FUBP1	100	99.542	ENSSBOG00000027299	FUBP1	100	99.542	Saimiri_boliviensis_boliviensis
ENSTTRG00000000096	FUBP1	94	97.900	ENSSHAG00000005367	FUBP1	100	97.900	Sarcophilus_harrisii
ENSTTRG00000000096	FUBP1	97	74.062	ENSSFOG00015010213	fubp1	70	79.167	Scleropages_formosus
ENSTTRG00000000096	FUBP1	98	69.774	ENSSDUG00000007383	fubp1	68	76.333	Seriola_dumerili
ENSTTRG00000000096	FUBP1	98	69.820	ENSSLDG00000022863	fubp1	72	76.754	Seriola_lalandi_dorsalis
ENSTTRG00000000096	FUBP1	100	97.491	ENSSARG00000011730	FUBP1	57	100.000	Sorex_araneus
ENSTTRG00000000096	FUBP1	98	88.253	ENSSPUG00000008389	FUBP1	99	86.091	Sphenodon_punctatus
ENSTTRG00000000096	FUBP1	98	72.136	ENSSPAG00000010161	fubp1	69	77.753	Stegastes_partitus
ENSTTRG00000000096	FUBP1	92	96.223	ENSTGUG00000006841	FUBP1	100	96.223	Taeniopygia_guttata
ENSTTRG00000000096	FUBP1	91	72.139	ENSTRUG00000004615	fubp1	65	77.729	Takifugu_rubripes
ENSTTRG00000000096	FUBP1	82	100.000	ENSTBEG00000017333	FUBP1	67	100.000	Tupaia_belangeri
ENSTTRG00000000096	FUBP1	99	100.000	ENSVPAG00000004709	FUBP1	100	100.000	Vicugna_pacos
ENSTTRG00000000096	FUBP1	98	68.615	ENSXCOG00000019354	fubp1	72	76.856	Xiphophorus_couchianus
ENSTTRG00000000096	FUBP1	95	71.677	ENSXMAG00000007168	fubp1	73	78.166	Xiphophorus_maculatus