EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000000293 (Gene tree)
Gene ID: -
Gene Symbol: ZNF550
Alias: MGC41917
Full Name: zinc finger protein 550
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 14190 bases
Position: chrGeneScaffold_3312:72910-87099
Accession: 28643
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000000275	zf-C2H2	PF00096.26	4.8e-41	1	7
ENSTTRP00000000275	zf-C2H2	PF00096.26	4.8e-41	2	7
ENSTTRP00000000275	zf-C2H2	PF00096.26	4.8e-41	3	7
ENSTTRP00000000275	zf-C2H2	PF00096.26	4.8e-41	4	7
ENSTTRP00000000275	zf-C2H2	PF00096.26	4.8e-41	5	7
ENSTTRP00000000275	zf-C2H2	PF00096.26	4.8e-41	6	7
ENSTTRP00000000275	zf-C2H2	PF00096.26	4.8e-41	7	7
ENSTTRP00000000275	zf-met	PF12874.7	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000000293	ZNF550-201	1212	-	ENSTTRP00000000275	403 (aa)	-	UPI00018B553D

Gene Model

Click here to download ENSTTRG00000000293's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000000293's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000000293	ZNF550	99	54.545	ENSTTRG00000004537	ZNF699	96	55.909
ENSTTRG00000000293	ZNF550	57	54.299	ENSTTRG00000008110	-	87	54.299
ENSTTRG00000000293	ZNF550	99	51.479	ENSTTRG00000015632	-	87	48.560
ENSTTRG00000000293	ZNF550	99	56.364	ENSTTRG00000003667	ZNF234	98	56.364
ENSTTRG00000000293	ZNF550	55	55.474	ENSTTRG00000001737	ZNF768	52	53.182
ENSTTRG00000000293	ZNF550	99	58.273	ENSTTRG00000011290	ZNF582	86	58.273
ENSTTRG00000000293	ZNF550	67	44.444	ENSTTRG00000017233	-	77	45.050
ENSTTRG00000000293	ZNF550	99	50.455	ENSTTRG00000000768	-	99	50.455
ENSTTRG00000000293	ZNF550	99	40.284	ENSTTRG00000008949	ZFP1	98	40.284
ENSTTRG00000000293	ZNF550	55	56.818	ENSTTRG00000006712	ZNF112	74	56.818
ENSTTRG00000000293	ZNF550	99	46.324	ENSTTRG00000004968	ZNF2	96	50.000
ENSTTRG00000000293	ZNF550	57	44.545	ENSTTRG00000003286	ZNF236	57	43.636
ENSTTRG00000000293	ZNF550	53	34.848	ENSTTRG00000008538	GTF3A	62	33.333
ENSTTRG00000000293	ZNF550	99	53.695	ENSTTRG00000014179	-	99	53.695
ENSTTRG00000000293	ZNF550	78	60.656	ENSTTRG00000006707	ZNF235	80	60.656
ENSTTRG00000000293	ZNF550	57	40.244	ENSTTRG00000002029	SNAI1	53	40.244
ENSTTRG00000000293	ZNF550	99	54.950	ENSTTRG00000011818	ZNF233	98	54.762
ENSTTRG00000000293	ZNF550	59	37.302	ENSTTRG00000008426	ZNF319	91	39.545
ENSTTRG00000000293	ZNF550	57	52.727	ENSTTRG00000003482	-	99	52.727
ENSTTRG00000000293	ZNF550	60	38.272	ENSTTRG00000008336	ZNF526	81	34.538
ENSTTRG00000000293	ZNF550	68	57.466	ENSTTRG00000015342	-	99	57.466
ENSTTRG00000000293	ZNF550	55	44.304	ENSTTRG00000001861	ZNF784	70	41.860
ENSTTRG00000000293	ZNF550	99	48.131	ENSTTRG00000004891	-	98	48.131
ENSTTRG00000000293	ZNF550	56	42.857	ENSTTRG00000010996	PRDM5	72	42.857
ENSTTRG00000000293	ZNF550	99	48.515	ENSTTRG00000002210	ZNF317	89	47.805
ENSTTRG00000000293	ZNF550	93	55.385	ENSTTRG00000012945	ZFP69B	99	55.385
ENSTTRG00000000293	ZNF550	99	55.909	ENSTTRG00000003670	ZNF226	99	55.909
ENSTTRG00000000293	ZNF550	56	39.362	ENSTTRG00000008326	ZNF574	64	37.981

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000000293	ZNF550	100	80.435	ENSG00000251369	ZNF550	99	80.531	Homo_sapiens
ENSTTRG00000000293	ZNF550	100	78.502	ENSCATG00000020915	ZNF550	98	78.502	Cercocebus_atys
ENSTTRG00000000293	ZNF550	91	66.578	ENSCLAG00000000250	ZNF550	95	66.578	Chinchilla_lanigera
ENSTTRG00000000293	ZNF550	100	77.778	ENSCSAG00000001629	ZNF550	100	77.778	Chlorocebus_sabaeus
ENSTTRG00000000293	ZNF550	100	78.019	ENSCANG00000033735	ZNF550	98	78.019	Colobus_angolensis_palliatus
ENSTTRG00000000293	ZNF550	86	70.506	ENSDNOG00000033330	-	99	70.506	Dasypus_novemcinctus
ENSTTRG00000000293	ZNF550	99	71.046	ENSFCAG00000034766	ZNF550	98	71.046	Felis_catus
ENSTTRG00000000293	ZNF550	100	79.952	ENSGGOG00000014068	ZNF550	98	79.952	Gorilla_gorilla
ENSTTRG00000000293	ZNF550	100	68.116	ENSHGLG00000018048	ZNF550	98	68.116	Heterocephalus_glaber_female
ENSTTRG00000000293	ZNF550	100	78.502	ENSMFAG00000036005	ZNF550	98	78.502	Macaca_fascicularis
ENSTTRG00000000293	ZNF550	100	78.019	ENSMMUG00000006122	ZNF550	98	78.019	Macaca_mulatta
ENSTTRG00000000293	ZNF550	100	78.502	ENSMNEG00000041366	ZNF550	98	78.502	Macaca_nemestrina
ENSTTRG00000000293	ZNF550	100	78.261	ENSMLEG00000034688	ZNF550	98	78.261	Mandrillus_leucophaeus
ENSTTRG00000000293	ZNF550	100	77.670	ENSMICG00000007561	ZNF550	98	77.670	Microcebus_murinus
ENSTTRG00000000293	ZNF550	99	70.803	ENSPPRG00000013475	ZNF550	98	70.803	Panthera_pardus
ENSTTRG00000000293	ZNF550	100	69.277	ENSPTIG00000018007	ZNF550	80	69.277	Panthera_tigris_altaica
ENSTTRG00000000293	ZNF550	100	80.193	ENSPTRG00000011560	ZNF550	98	80.193	Pan_troglodytes
ENSTTRG00000000293	ZNF550	100	77.778	ENSPANG00000030602	ZNF550	98	77.778	Papio_anubis
ENSTTRG00000000293	ZNF550	100	79.612	ENSPCOG00000018751	ZNF550	98	79.612	Propithecus_coquereli
ENSTTRG00000000293	ZNF550	100	73.966	ENSPVAG00000000908	ZNF550	98	73.966	Pteropus_vampyrus
ENSTTRG00000000293	ZNF550	100	78.986	ENSRBIG00000017275	ZNF550	98	78.986	Rhinopithecus_bieti
ENSTTRG00000000293	ZNF550	100	78.986	ENSRROG00000040063	ZNF550	98	78.986	Rhinopithecus_roxellana