EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000000559 (Gene tree)
Gene ID: -
Gene Symbol: LSG1
Alias: FLJ11301
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 24365 bases
Position: chrGeneScaffold_115:1502-25866
Accession: 25652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000000525	MMR_HSR1	PF01926.23	4.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000000560	LSG1-201	1962	-	ENSTTRP00000000525	653 (aa)	-	UPI00018B5347

Gene Model

Click here to download ENSTTRG00000000559's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000000559's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000000559	LSG1	99	76.480	ENSG00000041802	LSG1	98	92.529	Homo_sapiens
ENSTTRG00000000559	LSG1	91	65.926	ENSAPOG00000009694	lsg1	90	67.290	Acanthochromis_polyacanthus
ENSTTRG00000000559	LSG1	100	75.189	ENSAMEG00000009343	LSG1	100	75.189	Ailuropoda_melanoleuca
ENSTTRG00000000559	LSG1	98	60.938	ENSACIG00000012406	lsg1	100	60.949	Amphilophus_citrinellus
ENSTTRG00000000559	LSG1	91	65.556	ENSAOCG00000016066	lsg1	90	66.542	Amphiprion_ocellaris
ENSTTRG00000000559	LSG1	91	66.355	ENSAPEG00000003252	lsg1	90	66.355	Amphiprion_percula
ENSTTRG00000000559	LSG1	89	73.333	ENSATEG00000011794	lsg1	91	73.333	Anabas_testudineus
ENSTTRG00000000559	LSG1	86	67.843	ENSACAG00000004222	LSG1	90	67.843	Anolis_carolinensis
ENSTTRG00000000559	LSG1	99	77.086	ENSANAG00000021153	LSG1	99	77.997	Aotus_nancymaae
ENSTTRG00000000559	LSG1	100	58.806	ENSACLG00000000520	lsg1	100	59.552	Astatotilapia_calliptera
ENSTTRG00000000559	LSG1	91	70.000	ENSAMXG00000008271	lsg1	91	70.000	Astyanax_mexicanus
ENSTTRG00000000559	LSG1	99	83.896	ENSBTAG00000008461	LSG1	99	83.896	Bos_taurus
ENSTTRG00000000559	LSG1	65	50.811	WBGene00016907	C53H9.2	82	57.364	Caenorhabditis_elegans
ENSTTRG00000000559	LSG1	99	77.086	ENSCJAG00000013962	LSG1	99	77.997	Callithrix_jacchus
ENSTTRG00000000559	LSG1	95	75.279	ENSCAFG00000013445	LSG1	100	75.279	Canis_familiaris
ENSTTRG00000000559	LSG1	100	74.661	ENSCAFG00020002216	LSG1	100	74.661	Canis_lupus_dingo
ENSTTRG00000000559	LSG1	100	82.263	ENSCHIG00000015769	LSG1	100	83.639	Capra_hircus
ENSTTRG00000000559	LSG1	99	76.480	ENSTSYG00000001447	LSG1	99	77.238	Carlito_syrichta
ENSTTRG00000000559	LSG1	95	67.412	ENSCAPG00000009856	LSG1	99	68.051	Cavia_aperea
ENSTTRG00000000559	LSG1	99	76.176	ENSCCAG00000035744	LSG1	99	77.086	Cebus_capucinus
ENSTTRG00000000559	LSG1	91	93.220	ENSCATG00000042060	LSG1	91	93.220	Cercocebus_atys
ENSTTRG00000000559	LSG1	99	77.086	ENSCSAG00000008796	LSG1	92	77.997	Chlorocebus_sabaeus
ENSTTRG00000000559	LSG1	91	73.333	ENSCPBG00000015941	LSG1	76	73.333	Chrysemys_picta_bellii
ENSTTRG00000000559	LSG1	70	61.453	ENSCING00000007079	-	94	61.453	Ciona_intestinalis
ENSTTRG00000000559	LSG1	82	48.507	ENSCSAVG00000002514	-	96	48.507	Ciona_savignyi
ENSTTRG00000000559	LSG1	99	76.176	ENSCANG00000030709	LSG1	99	77.086	Colobus_angolensis_palliatus
ENSTTRG00000000559	LSG1	99	74.006	ENSCGRG00001019846	Lsg1	99	75.229	Cricetulus_griseus_chok1gshd
ENSTTRG00000000559	LSG1	99	74.006	ENSCGRG00000014617	Lsg1	99	75.229	Cricetulus_griseus_crigri
ENSTTRG00000000559	LSG1	98	59.633	ENSCSEG00000008522	lsg1	100	59.070	Cynoglossus_semilaevis
ENSTTRG00000000559	LSG1	98	61.381	ENSCVAG00000002484	lsg1	100	61.562	Cyprinodon_variegatus
ENSTTRG00000000559	LSG1	100	61.702	ENSDARG00000015352	lsg1	100	61.912	Danio_rerio
ENSTTRG00000000559	LSG1	99	76.256	ENSDNOG00000006224	LSG1	99	76.256	Dasypus_novemcinctus
ENSTTRG00000000559	LSG1	67	61.929	FBgn0266284	Ns3	81	51.866	Drosophila_melanogaster
ENSTTRG00000000559	LSG1	75	86.667	ENSETEG00000003888	LSG1	76	86.667	Echinops_telfairi
ENSTTRG00000000559	LSG1	79	59.958	ENSEBUG00000003119	lsg1	75	59.958	Eptatretus_burgeri
ENSTTRG00000000559	LSG1	99	77.997	ENSEASG00005000678	LSG1	99	78.907	Equus_asinus_asinus
ENSTTRG00000000559	LSG1	99	78.149	ENSECAG00000017659	LSG1	99	79.059	Equus_caballus
ENSTTRG00000000559	LSG1	78	88.333	ENSEEUG00000015217	LSG1	78	88.333	Erinaceus_europaeus
ENSTTRG00000000559	LSG1	100	57.991	ENSELUG00000023973	lsg1	100	58.143	Esox_lucius
ENSTTRG00000000559	LSG1	100	78.030	ENSFCAG00000024957	LSG1	100	78.030	Felis_catus
ENSTTRG00000000559	LSG1	99	58.079	ENSFALG00000007210	LSG1	99	58.841	Ficedula_albicollis
ENSTTRG00000000559	LSG1	99	70.245	ENSFDAG00000017373	LSG1	99	71.057	Fukomys_damarensis
ENSTTRG00000000559	LSG1	97	59.531	ENSFHEG00000003680	lsg1	99	59.970	Fundulus_heteroclitus
ENSTTRG00000000559	LSG1	74	75.806	ENSGMOG00000015834	lsg1	78	75.806	Gadus_morhua
ENSTTRG00000000559	LSG1	99	58.234	ENSGALG00000007058	LSG1	87	59.940	Gallus_gallus
ENSTTRG00000000559	LSG1	97	60.407	ENSGAFG00000015831	lsg1	99	60.736	Gambusia_affinis
ENSTTRG00000000559	LSG1	89	66.667	ENSGACG00000009323	lsg1	91	66.667	Gasterosteus_aculeatus
ENSTTRG00000000559	LSG1	99	76.783	ENSGGOG00000000520	LSG1	99	77.693	Gorilla_gorilla
ENSTTRG00000000559	LSG1	100	59.009	ENSHBUG00000005659	lsg1	100	59.760	Haplochromis_burtoni
ENSTTRG00000000559	LSG1	99	68.892	ENSHGLG00000017390	LSG1	99	70.136	Heterocephalus_glaber_female
ENSTTRG00000000559	LSG1	99	68.892	ENSHGLG00100018587	LSG1	99	70.136	Heterocephalus_glaber_male
ENSTTRG00000000559	LSG1	89	70.000	ENSHCOG00000016848	lsg1	91	70.000	Hippocampus_comes
ENSTTRG00000000559	LSG1	91	73.333	ENSIPUG00000008631	lsg1	91	73.333	Ictalurus_punctatus
ENSTTRG00000000559	LSG1	81	75.758	ENSSTOG00000010234	LSG1	99	75.758	Ictidomys_tridecemlineatus
ENSTTRG00000000559	LSG1	99	71.908	ENSJJAG00000015513	Lsg1	99	72.672	Jaculus_jaculus
ENSTTRG00000000559	LSG1	98	58.502	ENSKMAG00000009681	lsg1	100	58.104	Kryptolebias_marmoratus
ENSTTRG00000000559	LSG1	89	71.186	ENSLBEG00000024261	lsg1	90	71.186	Labrus_bergylta
ENSTTRG00000000559	LSG1	100	61.619	ENSLACG00000013399	LSG1	100	61.619	Latimeria_chalumnae
ENSTTRG00000000559	LSG1	89	67.857	ENSLOCG00000004918	lsg1	91	67.459	Lepisosteus_oculatus
ENSTTRG00000000559	LSG1	99	74.885	ENSLAFG00000012919	-	99	75.651	Loxodonta_africana
ENSTTRG00000000559	LSG1	99	77.390	ENSMFAG00000039903	LSG1	99	76.935	Macaca_fascicularis
ENSTTRG00000000559	LSG1	99	77.390	ENSMMUG00000010708	LSG1	99	78.300	Macaca_mulatta
ENSTTRG00000000559	LSG1	99	77.390	ENSMNEG00000031538	LSG1	99	76.783	Macaca_nemestrina
ENSTTRG00000000559	LSG1	99	77.238	ENSMLEG00000041184	LSG1	99	78.149	Mandrillus_leucophaeus
ENSTTRG00000000559	LSG1	91	71.667	ENSMAMG00000000470	lsg1	91	71.667	Mastacembelus_armatus
ENSTTRG00000000559	LSG1	100	59.337	ENSMZEG00005017865	lsg1	100	60.090	Maylandia_zebra
ENSTTRG00000000559	LSG1	89	59.359	ENSMGAG00000007050	LSG1	99	61.121	Meleagris_gallopavo
ENSTTRG00000000559	LSG1	82	79.740	ENSMAUG00000016976	Lsg1	83	81.227	Mesocricetus_auratus
ENSTTRG00000000559	LSG1	99	75.762	ENSMICG00000049087	LSG1	99	76.524	Microcebus_murinus
ENSTTRG00000000559	LSG1	99	73.893	ENSMOCG00000022136	Lsg1	99	74.198	Microtus_ochrogaster
ENSTTRG00000000559	LSG1	75	82.796	ENSMMOG00000008884	lsg1	90	82.796	Mola_mola
ENSTTRG00000000559	LSG1	91	63.333	ENSMODG00000019828	LSG1	90	63.333	Monodelphis_domestica
ENSTTRG00000000559	LSG1	100	72.936	MGP_CAROLIEiJ_G0020648	Lsg1	100	73.853	Mus_caroli
ENSTTRG00000000559	LSG1	100	73.242	ENSMUSG00000022538	Lsg1	100	73.853	Mus_musculus
ENSTTRG00000000559	LSG1	98	73.602	MGP_PahariEiJ_G0016352	Lsg1	100	74.656	Mus_pahari
ENSTTRG00000000559	LSG1	100	73.089	MGP_SPRETEiJ_G0021544	Lsg1	100	74.006	Mus_spretus
ENSTTRG00000000559	LSG1	100	77.273	ENSMPUG00000003734	LSG1	100	77.273	Mustela_putorius_furo
ENSTTRG00000000559	LSG1	100	78.015	ENSMLUG00000012548	LSG1	100	78.779	Myotis_lucifugus
ENSTTRG00000000559	LSG1	99	73.201	ENSNGAG00000021872	Lsg1	99	74.119	Nannospalax_galili
ENSTTRG00000000559	LSG1	99	76.631	ENSNLEG00000008293	LSG1	99	77.542	Nomascus_leucogenys
ENSTTRG00000000559	LSG1	60	76.891	ENSMEUG00000009041	-	74	76.891	Notamacropus_eugenii
ENSTTRG00000000559	LSG1	100	58.027	ENSONIG00000002635	lsg1	100	60.212	Oreochromis_niloticus
ENSTTRG00000000559	LSG1	86	74.104	ENSOANG00000012742	LSG1	89	74.104	Ornithorhynchus_anatinus
ENSTTRG00000000559	LSG1	99	75.569	ENSOCUG00000004817	LSG1	99	76.935	Oryctolagus_cuniculus
ENSTTRG00000000559	LSG1	98	61.275	ENSORLG00000007695	lsg1	100	60.823	Oryzias_latipes
ENSTTRG00000000559	LSG1	98	60.469	ENSORLG00020016286	lsg1	100	60.184	Oryzias_latipes_hni
ENSTTRG00000000559	LSG1	98	60.312	ENSORLG00015012025	lsg1	100	60.337	Oryzias_latipes_hsok
ENSTTRG00000000559	LSG1	98	59.750	ENSOMEG00000022379	lsg1	100	59.327	Oryzias_melastigma
ENSTTRG00000000559	LSG1	99	74.510	ENSOGAG00000003475	LSG1	99	74.510	Otolemur_garnettii
ENSTTRG00000000559	LSG1	100	83.792	ENSOARG00000020403	LSG1	100	83.792	Ovis_aries
ENSTTRG00000000559	LSG1	99	77.542	ENSPPAG00000029271	LSG1	99	77.542	Pan_paniscus
ENSTTRG00000000559	LSG1	100	77.061	ENSPPRG00000010281	LSG1	100	77.061	Panthera_pardus
ENSTTRG00000000559	LSG1	100	77.727	ENSPTIG00000010789	LSG1	100	77.727	Panthera_tigris_altaica
ENSTTRG00000000559	LSG1	99	77.390	ENSPTRG00000015760	LSG1	99	77.390	Pan_troglodytes
ENSTTRG00000000559	LSG1	99	77.238	ENSPANG00000018249	LSG1	99	76.783	Papio_anubis
ENSTTRG00000000559	LSG1	89	72.881	ENSPKIG00000002895	lsg1	91	72.881	Paramormyrops_kingsleyae
ENSTTRG00000000559	LSG1	96	59.750	ENSPSIG00000009821	LSG1	100	59.750	Pelodiscus_sinensis
ENSTTRG00000000559	LSG1	86	67.323	ENSPMGG00000000931	lsg1	90	67.323	Periophthalmus_magnuspinnatus
ENSTTRG00000000559	LSG1	99	74.351	ENSPEMG00000012082	-	99	74.351	Peromyscus_maniculatus_bairdii
ENSTTRG00000000559	LSG1	91	60.141	ENSPMAG00000007451	lsg1	91	60.141	Petromyzon_marinus
ENSTTRG00000000559	LSG1	91	83.562	ENSPCIG00000013890	LSG1	75	83.562	Phascolarctos_cinereus
ENSTTRG00000000559	LSG1	97	61.250	ENSPFOG00000021882	lsg1	99	61.339	Poecilia_formosa
ENSTTRG00000000559	LSG1	97	60.469	ENSPLAG00000019536	lsg1	99	60.578	Poecilia_latipinna
ENSTTRG00000000559	LSG1	89	69.492	ENSPMEG00000017281	lsg1	90	69.492	Poecilia_mexicana
ENSTTRG00000000559	LSG1	97	51.064	ENSPREG00000006048	lsg1	99	51.335	Poecilia_reticulata
ENSTTRG00000000559	LSG1	82	84.658	ENSPPYG00000014425	LSG1	89	84.658	Pongo_abelii
ENSTTRG00000000559	LSG1	90	85.333	ENSPCAG00000005511	LSG1	90	85.333	Procavia_capensis
ENSTTRG00000000559	LSG1	99	76.024	ENSPCOG00000012360	LSG1	99	76.783	Propithecus_coquereli
ENSTTRG00000000559	LSG1	100	58.657	ENSPNYG00000021994	lsg1	100	59.403	Pundamilia_nyererei
ENSTTRG00000000559	LSG1	91	71.667	ENSPNAG00000015533	lsg1	91	71.667	Pygocentrus_nattereri
ENSTTRG00000000559	LSG1	100	73.516	ENSRNOG00000001727	Lsg1	100	74.772	Rattus_norvegicus
ENSTTRG00000000559	LSG1	99	75.873	ENSRBIG00000029053	LSG1	99	76.783	Rhinopithecus_bieti
ENSTTRG00000000559	LSG1	99	75.873	ENSRROG00000037702	LSG1	99	76.783	Rhinopithecus_roxellana
ENSTTRG00000000559	LSG1	67	56.051	YGL099W	LSG1	69	56.051	Saccharomyces_cerevisiae
ENSTTRG00000000559	LSG1	99	76.935	ENSSBOG00000034938	LSG1	99	77.845	Saimiri_boliviensis_boliviensis
ENSTTRG00000000559	LSG1	69	68.932	ENSSHAG00000003487	LSG1	89	68.932	Sarcophilus_harrisii
ENSTTRG00000000559	LSG1	89	74.194	ENSSFOG00015008955	lsg1	91	74.194	Scleropages_formosus
ENSTTRG00000000559	LSG1	89	70.000	ENSSDUG00000004622	lsg1	91	70.000	Seriola_dumerili
ENSTTRG00000000559	LSG1	89	70.000	ENSSLDG00000010869	lsg1	91	70.000	Seriola_lalandi_dorsalis
ENSTTRG00000000559	LSG1	82	69.971	ENSSARG00000012981	LSG1	84	69.806	Sorex_araneus
ENSTTRG00000000559	LSG1	91	76.667	ENSSPUG00000016347	LSG1	100	76.667	Sphenodon_punctatus
ENSTTRG00000000559	LSG1	91	68.333	ENSSPAG00000005508	lsg1	90	68.333	Stegastes_partitus
ENSTTRG00000000559	LSG1	100	81.930	ENSSSCG00000011827	LSG1	100	81.930	Sus_scrofa
ENSTTRG00000000559	LSG1	80	65.136	ENSTGUG00000009068	LSG1	90	66.180	Taeniopygia_guttata
ENSTTRG00000000559	LSG1	89	66.667	ENSTRUG00000017380	lsg1	91	66.667	Takifugu_rubripes
ENSTTRG00000000559	LSG1	89	68.333	ENSTNIG00000015570	lsg1	91	68.333	Tetraodon_nigroviridis
ENSTTRG00000000559	LSG1	100	76.061	ENSUAMG00000012454	LSG1	100	76.061	Ursus_americanus
ENSTTRG00000000559	LSG1	100	76.061	ENSUMAG00000000855	LSG1	100	76.061	Ursus_maritimus
ENSTTRG00000000559	LSG1	95	76.518	ENSVPAG00000012400	LSG1	100	76.518	Vicugna_pacos
ENSTTRG00000000559	LSG1	95	74.641	ENSVVUG00000008956	LSG1	97	74.641	Vulpes_vulpes
ENSTTRG00000000559	LSG1	100	61.725	ENSXETG00000003451	lsg1	100	62.236	Xenopus_tropicalis
ENSTTRG00000000559	LSG1	97	59.718	ENSXCOG00000003239	lsg1	99	59.939	Xiphophorus_couchianus
ENSTTRG00000000559	LSG1	97	60.063	ENSXMAG00000005536	lsg1	99	60.123	Xiphophorus_maculatus