EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSTTRG00000000861 (Gene tree)
Gene ID
-
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Tursiops_truncatus
Status
putative
Strand
Plus strand
Length
39835 bases
Position
chrGeneScaffold_1966:256111-295945
Accession
2326
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTTRP00000000813CPSF73-100_CPF11718.84.2e-4511
ENSTTRP00000000813Beta-CaspPF10996.82.1e-0711
ENSTTRP00000000813Lactamase_BPF00753.279.6e-1911
ENSTTRP00000000813RMMBLPF07521.121.2e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTTRT00000000862CPSF3-2012052-ENSTTRP00000000813683 (aa)-UPI00018B7F4A
Gene Model
Click here to download ENSTTRG00000000861's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000000861's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTTRG00000000861CPSF38898.387ENSG00000119203CPSF3100100.000Homo_sapiens
ENSTTRG00000000861CPSF38773.479ENSAPOG00000022087cpsf38673.479Acanthochromis_polyacanthus
ENSTTRG00000000861CPSF36074.939ENSAPOG00000012241CPSF36891.228Acanthochromis_polyacanthus
ENSTTRG00000000861CPSF38899.462ENSAMEG00000008493CPSF38899.462Ailuropoda_melanoleuca
ENSTTRG00000000861CPSF38068.975ENSACIG00000023663CPSF38668.975Amphilophus_citrinellus
ENSTTRG00000000861CPSF37967.222ENSACIG00000009846cpsf38567.222Amphilophus_citrinellus
ENSTTRG00000000861CPSF38774.939ENSAOCG00000010077CPSF38674.939Amphiprion_ocellaris
ENSTTRG00000000861CPSF38773.479ENSAOCG00000022056cpsf38673.479Amphiprion_ocellaris
ENSTTRG00000000861CPSF38773.479ENSAPEG00000019526cpsf38673.479Amphiprion_percula
ENSTTRG00000000861CPSF38774.939ENSAPEG00000021167CPSF38674.939Amphiprion_percula
ENSTTRG00000000861CPSF38773.236ENSATEG00000003959cpsf38673.236Anabas_testudineus
ENSTTRG00000000861CPSF38374.939ENSATEG00000014525CPSF38474.939Anabas_testudineus
ENSTTRG00000000861CPSF38686.559ENSAPLG00000006941CPSF38686.559Anas_platyrhynchos
ENSTTRG00000000861CPSF38076.344ENSACAG00000001759CPSF38776.344Anolis_carolinensis
ENSTTRG00000000861CPSF38884.946ENSANAG00000031254CPSF38884.946Aotus_nancymaae
ENSTTRG00000000861CPSF38572.796ENSACLG00000014484cpsf38772.796Astatotilapia_calliptera
ENSTTRG00000000861CPSF38069.252ENSACLG00000018846CPSF38669.252Astatotilapia_calliptera
ENSTTRG00000000861CPSF38774.696ENSAMXG00000004786cpsf38774.696Astyanax_mexicanus
ENSTTRG00000000861CPSF388100.000ENSBTAG00000019735CPSF388100.000Bos_taurus
ENSTTRG00000000861CPSF37851.825WBGene00013460cpsf-37751.825Caenorhabditis_elegans
ENSTTRG00000000861CPSF38897.312ENSCJAG00000006276CPSF38897.312Callithrix_jacchus
ENSTTRG00000000861CPSF38899.462ENSCAFG00000003375CPSF38499.462Canis_familiaris
ENSTTRG00000000861CPSF378100.000ENSCAFG00020026799CPSF386100.000Canis_lupus_dingo
ENSTTRG00000000861CPSF388100.000ENSCHIG00000013973CPSF388100.000Capra_hircus
ENSTTRG00000000861CPSF38898.387ENSTSYG00000002967CPSF38898.387Carlito_syrichta
ENSTTRG00000000861CPSF38593.548ENSCAPG00000013851CPSF38793.548Cavia_aperea
ENSTTRG00000000861CPSF38893.548ENSCPOG00000011299CPSF38893.548Cavia_porcellus
ENSTTRG00000000861CPSF38897.849ENSCCAG00000036730CPSF38897.849Cebus_capucinus
ENSTTRG00000000861CPSF38888.770ENSCATG00000014770CPSF385100.000Cercocebus_atys
ENSTTRG00000000861CPSF38891.935ENSCLAG00000002727CPSF38891.935Chinchilla_lanigera
ENSTTRG00000000861CPSF38898.387ENSCSAG00000007125CPSF38798.387Chlorocebus_sabaeus
ENSTTRG00000000861CPSF360100.000ENSCHOG00000000180CPSF35974.634Choloepus_hoffmanni
ENSTTRG00000000861CPSF38785.946ENSCPBG00000014074CPSF38785.946Chrysemys_picta_bellii
ENSTTRG00000000861CPSF38759.268ENSCING00000007214-8659.268Ciona_intestinalis
ENSTTRG00000000861CPSF38876.329ENSCANG00000034435CPSF38776.329Colobus_angolensis_palliatus
ENSTTRG00000000861CPSF38897.312ENSCGRG00001013134Cpsf38897.312Cricetulus_griseus_chok1gshd
ENSTTRG00000000861CPSF38897.312ENSCGRG00000018319Cpsf38897.312Cricetulus_griseus_crigri
ENSTTRG00000000861CPSF38774.209ENSCSEG00000002021CPSF38674.209Cynoglossus_semilaevis
ENSTTRG00000000861CPSF38774.939ENSCVAG00000015067CPSF38674.939Cyprinodon_variegatus
ENSTTRG00000000861CPSF38774.939ENSDARG00000027649cpsf38674.939Danio_rerio
ENSTTRG00000000861CPSF38797.849ENSDNOG00000008940CPSF38397.849Dasypus_novemcinctus
ENSTTRG00000000861CPSF38396.078ENSDORG00000014263Cpsf38796.078Dipodomys_ordii
ENSTTRG00000000861CPSF38761.017FBgn0261065Cpsf738661.017Drosophila_melanogaster
ENSTTRG00000000861CPSF38392.157ENSETEG00000003893CPSF38792.157Echinops_telfairi
ENSTTRG00000000861CPSF38770.488ENSEBUG00000009018cpsf38670.488Eptatretus_burgeri
ENSTTRG00000000861CPSF38899.462ENSEASG00005003970CPSF38899.462Equus_asinus_asinus
ENSTTRG00000000861CPSF38899.462ENSECAG00000019911CPSF38899.462Equus_caballus
ENSTTRG00000000861CPSF37496.237ENSEEUG00000015422CPSF37496.237Erinaceus_europaeus
ENSTTRG00000000861CPSF38774.029ENSELUG00000013775cpsf38674.029Esox_lucius
ENSTTRG00000000861CPSF388100.000ENSFCAG00000007852CPSF388100.000Felis_catus
ENSTTRG00000000861CPSF38284.946ENSFALG00000006572CPSF38784.946Ficedula_albicollis
ENSTTRG00000000861CPSF38791.848ENSFDAG00000006317CPSF38791.848Fukomys_damarensis
ENSTTRG00000000861CPSF38772.993ENSFHEG00000014774cpsf38672.993Fundulus_heteroclitus
ENSTTRG00000000861CPSF38773.236ENSGMOG00000003157cpsf38673.236Gadus_morhua
ENSTTRG00000000861CPSF38783.333ENSGALG00000016424CPSF38783.333Gallus_gallus
ENSTTRG00000000861CPSF38774.939ENSGAFG00000008016CPSF38674.939Gambusia_affinis
ENSTTRG00000000861CPSF38066.757ENSGAFG00000019449cpsf38666.757Gambusia_affinis
ENSTTRG00000000861CPSF35084.783ENSGAGG00000025583CPSF36884.783Gopherus_agassizii
ENSTTRG00000000861CPSF38898.925ENSGGOG00000001757CPSF38898.925Gorilla_gorilla
ENSTTRG00000000861CPSF38773.123ENSHBUG00000001188cpsf38673.123Haplochromis_burtoni
ENSTTRG00000000861CPSF38889.785ENSHGLG00000000666CPSF38789.785Heterocephalus_glaber_female
ENSTTRG00000000861CPSF38889.785ENSHGLG00100007765CPSF38789.785Heterocephalus_glaber_male
ENSTTRG00000000861CPSF38773.123ENSHCOG00000007251cpsf38673.123Hippocampus_comes
ENSTTRG00000000861CPSF38774.696ENSHCOG00000015957CPSF38574.696Hippocampus_comes
ENSTTRG00000000861CPSF38774.209ENSIPUG00000023488cpsf38674.209Ictalurus_punctatus
ENSTTRG00000000861CPSF38897.312ENSSTOG00000004476CPSF38897.312Ictidomys_tridecemlineatus
ENSTTRG00000000861CPSF38894.624ENSJJAG00000023415Cpsf38894.624Jaculus_jaculus
ENSTTRG00000000861CPSF38774.696ENSKMAG00000007317CPSF38674.696Kryptolebias_marmoratus
ENSTTRG00000000861CPSF38773.236ENSKMAG00000002806cpsf38673.236Kryptolebias_marmoratus
ENSTTRG00000000861CPSF38274.939ENSLBEG00000013492CPSF38574.939Labrus_bergylta
ENSTTRG00000000861CPSF38773.236ENSLBEG00000020569cpsf38373.236Labrus_bergylta
ENSTTRG00000000861CPSF37381.962ENSLACG00000008308CPSF37881.962Latimeria_chalumnae
ENSTTRG00000000861CPSF38774.939ENSLOCG00000016823cpsf38674.939Lepisosteus_oculatus
ENSTTRG00000000861CPSF38798.387ENSLAFG00000009467CPSF38898.387Loxodonta_africana
ENSTTRG00000000861CPSF38898.387ENSMFAG00000001339CPSF38898.387Macaca_fascicularis
ENSTTRG00000000861CPSF38298.387ENSMMUG00000018038CPSF38798.387Macaca_mulatta
ENSTTRG00000000861CPSF364100.000ENSMNEG00000039447CPSF370100.000Macaca_nemestrina
ENSTTRG00000000861CPSF38898.925ENSMLEG00000026825CPSF38898.925Mandrillus_leucophaeus
ENSTTRG00000000861CPSF38068.975ENSMAMG00000008835CPSF38668.975Mastacembelus_armatus
ENSTTRG00000000861CPSF38773.723ENSMAMG00000003076cpsf38673.723Mastacembelus_armatus
ENSTTRG00000000861CPSF38774.939ENSMZEG00005006258CPSF38674.939Maylandia_zebra
ENSTTRG00000000861CPSF38773.123ENSMZEG00005014358cpsf38673.123Maylandia_zebra
ENSTTRG00000000861CPSF38583.871ENSMGAG00000013995CPSF38783.871Meleagris_gallopavo
ENSTTRG00000000861CPSF378100.000ENSMICG00000002363CPSF379100.000Microcebus_murinus
ENSTTRG00000000861CPSF38880.108ENSMOCG00000020067Cpsf38780.108Microtus_ochrogaster
ENSTTRG00000000861CPSF37160.443ENSMMOG00000011923CPSF36692.157Mola_mola
ENSTTRG00000000861CPSF38271.353ENSMMOG00000018212CPSF38571.353Mola_mola
ENSTTRG00000000861CPSF38887.047ENSMODG00000014703CPSF38887.047Monodelphis_domestica
ENSTTRG00000000861CPSF38773.123ENSMALG00000016416cpsf38673.123Monopterus_albus
ENSTTRG00000000861CPSF38069.189ENSMALG00000011474CPSF38669.189Monopterus_albus
ENSTTRG00000000861CPSF38896.237MGP_CAROLIEiJ_G0017640Cpsf38896.237Mus_caroli
ENSTTRG00000000861CPSF38896.237ENSMUSG00000054309Cpsf38896.237Mus_musculus
ENSTTRG00000000861CPSF38895.699MGP_PahariEiJ_G0029397Cpsf38895.699Mus_pahari
ENSTTRG00000000861CPSF38896.237MGP_SPRETEiJ_G0018481Cpsf38896.237Mus_spretus
ENSTTRG00000000861CPSF38896.774ENSMPUG00000013213CPSF38896.774Mustela_putorius_furo
ENSTTRG00000000861CPSF38895.187ENSMLUG00000010636CPSF38895.187Myotis_lucifugus
ENSTTRG00000000861CPSF38896.774ENSNGAG00000019836Cpsf38896.774Nannospalax_galili
ENSTTRG00000000861CPSF38069.252ENSNBRG00000010525CPSF38669.252Neolamprologus_brichardi
ENSTTRG00000000861CPSF38773.123ENSNBRG00000004770cpsf38673.123Neolamprologus_brichardi
ENSTTRG00000000861CPSF38898.387ENSNLEG00000013359CPSF38898.387Nomascus_leucogenys
ENSTTRG00000000861CPSF364100.000ENSMEUG00000013117-64100.000Notamacropus_eugenii
ENSTTRG00000000861CPSF364100.000ENSOPRG00000008902CPSF364100.000Ochotona_princeps
ENSTTRG00000000861CPSF38890.860ENSODEG00000003129CPSF38890.860Octodon_degus
ENSTTRG00000000861CPSF38773.123ENSONIG00000018812cpsf38673.123Oreochromis_niloticus
ENSTTRG00000000861CPSF37090.860ENSOANG00000008577CPSF38590.860Ornithorhynchus_anatinus
ENSTTRG00000000861CPSF38897.849ENSOCUG00000003728CPSF38897.849Oryctolagus_cuniculus
ENSTTRG00000000861CPSF38772.397ENSORLG00000018854cpsf38672.397Oryzias_latipes
ENSTTRG00000000861CPSF38772.397ENSORLG00020013331cpsf38672.397Oryzias_latipes_hni
ENSTTRG00000000861CPSF38772.397ENSORLG00015011017cpsf38672.397Oryzias_latipes_hsok
ENSTTRG00000000861CPSF38772.397ENSOMEG00000010647cpsf38372.397Oryzias_melastigma
ENSTTRG00000000861CPSF37497.849ENSOGAG00000001680CPSF37497.849Otolemur_garnettii
ENSTTRG00000000861CPSF388100.000ENSOARG00000015073CPSF388100.000Ovis_aries
ENSTTRG00000000861CPSF38898.925ENSPPAG00000042457CPSF38898.925Pan_paniscus
ENSTTRG00000000861CPSF38898.925ENSPPRG00000016790CPSF38898.925Panthera_pardus
ENSTTRG00000000861CPSF38798.925ENSPTIG00000003920CPSF38798.925Panthera_tigris_altaica
ENSTTRG00000000861CPSF38898.925ENSPTRG00000011638CPSF38898.925Pan_troglodytes
ENSTTRG00000000861CPSF38897.849ENSPANG00000016798CPSF38897.849Papio_anubis
ENSTTRG00000000861CPSF38775.000ENSPKIG00000023646cpsf38675.000Paramormyrops_kingsleyae
ENSTTRG00000000861CPSF38782.258ENSPSIG00000016144CPSF38882.258Pelodiscus_sinensis
ENSTTRG00000000861CPSF36867.500ENSPMGG00000006141-8167.500Periophthalmus_magnuspinnatus
ENSTTRG00000000861CPSF38895.161ENSPEMG00000017668Cpsf38895.161Peromyscus_maniculatus_bairdii
ENSTTRG00000000861CPSF35893.564ENSPMAG00000004841cpsf37393.564Petromyzon_marinus
ENSTTRG00000000861CPSF38592.473ENSPCIG00000009823CPSF38692.473Phascolarctos_cinereus
ENSTTRG00000000861CPSF38774.939ENSPFOG00000010418-8674.939Poecilia_formosa
ENSTTRG00000000861CPSF38773.123ENSPFOG00000015922cpsf38673.123Poecilia_formosa
ENSTTRG00000000861CPSF38773.123ENSPLAG00000000882cpsf38773.123Poecilia_latipinna
ENSTTRG00000000861CPSF38773.123ENSPMEG00000018309cpsf38773.123Poecilia_mexicana
ENSTTRG00000000861CPSF38066.757ENSPREG00000014875cpsf38666.757Poecilia_reticulata
ENSTTRG00000000861CPSF38774.939ENSPREG00000004482CPSF38574.939Poecilia_reticulata
ENSTTRG00000000861CPSF38898.387ENSPPYG00000012666CPSF38798.387Pongo_abelii
ENSTTRG00000000861CPSF36889.028ENSPCAG00000015042CPSF37289.028Procavia_capensis
ENSTTRG00000000861CPSF364100.000ENSPCOG00000023016CPSF372100.000Propithecus_coquereli
ENSTTRG00000000861CPSF38798.370ENSPVAG00000005324CPSF38798.370Pteropus_vampyrus
ENSTTRG00000000861CPSF36774.490ENSPNYG00000021047CPSF37774.490Pundamilia_nyererei
ENSTTRG00000000861CPSF38773.123ENSPNYG00000004405cpsf38673.123Pundamilia_nyererei
ENSTTRG00000000861CPSF38774.696ENSPNAG00000023060cpsf38674.696Pygocentrus_nattereri
ENSTTRG00000000861CPSF38796.196ENSRNOG00000052418Cpsf38796.196Rattus_norvegicus
ENSTTRG00000000861CPSF38898.919ENSRBIG00000041615CPSF39098.919Rhinopithecus_bieti
ENSTTRG00000000861CPSF38898.925ENSRROG00000033792CPSF38898.925Rhinopithecus_roxellana
ENSTTRG00000000861CPSF35838.983YLR277CYSH15338.983Saccharomyces_cerevisiae
ENSTTRG00000000861CPSF38798.352ENSSBOG00000027263CPSF38798.352Saimiri_boliviensis_boliviensis
ENSTTRG00000000861CPSF38893.011ENSSHAG00000007024CPSF38893.011Sarcophilus_harrisii
ENSTTRG00000000861CPSF38774.818ENSSFOG00015002108cpsf38674.818Scleropages_formosus
ENSTTRG00000000861CPSF38274.696ENSSMAG00000020534CPSF38374.696Scophthalmus_maximus
ENSTTRG00000000861CPSF38774.939ENSSDUG00000018498CPSF38674.939Seriola_dumerili
ENSTTRG00000000861CPSF38772.881ENSSDUG00000002828cpsf38472.881Seriola_dumerili
ENSTTRG00000000861CPSF38774.939ENSSLDG00000005234CPSF38674.939Seriola_lalandi_dorsalis
ENSTTRG00000000861CPSF38772.881ENSSLDG00000008469cpsf38472.881Seriola_lalandi_dorsalis
ENSTTRG00000000861CPSF38865.054ENSSARG00000005186CPSF38865.054Sorex_araneus
ENSTTRG00000000861CPSF38581.183ENSSPUG00000015525CPSF38581.183Sphenodon_punctatus
ENSTTRG00000000861CPSF38773.723ENSSPAG00000018579cpsf38673.723Stegastes_partitus
ENSTTRG00000000861CPSF38774.939ENSSPAG00000002906CPSF38674.939Stegastes_partitus
ENSTTRG00000000861CPSF38898.919ENSSSCG00000020799CPSF38898.919Sus_scrofa
ENSTTRG00000000861CPSF38784.409ENSTGUG00000013016CPSF38784.409Taeniopygia_guttata
ENSTTRG00000000861CPSF38773.723ENSTRUG00000007030cpsf38473.723Takifugu_rubripes
ENSTTRG00000000861CPSF37477.429ENSTBEG00000002707CPSF37377.429Tupaia_belangeri
ENSTTRG00000000861CPSF38788.043ENSUAMG00000007535CPSF38688.043Ursus_americanus
ENSTTRG00000000861CPSF38299.462ENSUMAG00000003676CPSF38799.462Ursus_maritimus
ENSTTRG00000000861CPSF38084.314ENSVPAG00000008041CPSF38784.314Vicugna_pacos
ENSTTRG00000000861CPSF38899.462ENSVVUG00000002194CPSF38899.462Vulpes_vulpes
ENSTTRG00000000861CPSF38775.545ENSXETG00000008263cpsf38675.545Xenopus_tropicalis
ENSTTRG00000000861CPSF38773.123ENSXCOG00000019695cpsf38673.123Xiphophorus_couchianus
ENSTTRG00000000861CPSF380100.000ENSXMAG00000027291CPSF374100.000Xiphophorus_maculatus
ENSTTRG00000000861CPSF38773.123ENSXMAG00000009784cpsf38673.123Xiphophorus_maculatus

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