EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000000928 (Gene tree)
Gene ID: -
Gene Symbol: SRP54
Alias: -
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Plus strand
Length: 30297 bases
Position: chrGeneScaffold_3389:201494-231790
Accession: 11301
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000000875	SRP54	PF00448.22	5e-55	1	2
ENSTTRP00000000875	SRP54	PF00448.22	5e-55	2	2
ENSTTRP00000000875	SRP54_N	PF02881.19	1.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000000928	SRP54-201	1515	-	ENSTTRP00000000875	504 (aa)	-	UPI00018B6A5F

Gene Model

Click here to download ENSTTRG00000000928's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000000928's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000000928	SRP54	100	89.881	ENSG00000100883	SRP54	100	100.000	Homo_sapiens
ENSTTRG00000000928	SRP54	100	86.706	ENSAPOG00000011314	srp54	100	86.706	Acanthochromis_polyacanthus
ENSTTRG00000000928	SRP54	100	89.881	ENSAMEG00000015544	SRP54	100	89.881	Ailuropoda_melanoleuca
ENSTTRG00000000928	SRP54	89	84.410	ENSACIG00000022831	srp54	97	84.410	Amphilophus_citrinellus
ENSTTRG00000000928	SRP54	100	86.706	ENSAOCG00000019401	srp54	100	86.706	Amphiprion_ocellaris
ENSTTRG00000000928	SRP54	100	86.706	ENSAPEG00000001977	srp54	100	86.706	Amphiprion_percula
ENSTTRG00000000928	SRP54	100	86.905	ENSATEG00000013877	srp54	100	86.905	Anabas_testudineus
ENSTTRG00000000928	SRP54	94	87.975	ENSAPLG00000010125	SRP54	95	87.975	Anas_platyrhynchos
ENSTTRG00000000928	SRP54	100	88.492	ENSACAG00000002103	-	100	88.492	Anolis_carolinensis
ENSTTRG00000000928	SRP54	58	82.993	ENSACAG00000001124	-	91	82.993	Anolis_carolinensis
ENSTTRG00000000928	SRP54	86	83.871	ENSACAG00000010631	-	100	83.871	Anolis_carolinensis
ENSTTRG00000000928	SRP54	100	89.881	ENSANAG00000022133	SRP54	100	89.881	Aotus_nancymaae
ENSTTRG00000000928	SRP54	100	86.706	ENSACLG00000015866	srp54	100	86.706	Astatotilapia_calliptera
ENSTTRG00000000928	SRP54	100	86.310	ENSAMXG00000032669	SRP54	100	86.310	Astyanax_mexicanus
ENSTTRG00000000928	SRP54	100	89.881	ENSBTAG00000019085	SRP54	100	89.881	Bos_taurus
ENSTTRG00000000928	SRP54	98	63.454	WBGene00009012	F21D5.7	100	63.454	Caenorhabditis_elegans
ENSTTRG00000000928	SRP54	100	89.881	ENSCJAG00000006581	SRP54	100	89.881	Callithrix_jacchus
ENSTTRG00000000928	SRP54	100	89.881	ENSCAFG00000013331	SRP54	100	89.881	Canis_familiaris
ENSTTRG00000000928	SRP54	100	89.881	ENSCAFG00020023427	SRP54	100	89.881	Canis_lupus_dingo
ENSTTRG00000000928	SRP54	100	89.881	ENSCHIG00000026345	SRP54	100	89.881	Capra_hircus
ENSTTRG00000000928	SRP54	94	78.316	ENSTSYG00000035333	-	93	78.316	Carlito_syrichta
ENSTTRG00000000928	SRP54	100	89.683	ENSTSYG00000002680	-	100	89.683	Carlito_syrichta
ENSTTRG00000000928	SRP54	79	73.664	ENSCAPG00000008780	SRP54	80	73.664	Cavia_aperea
ENSTTRG00000000928	SRP54	100	89.484	ENSCPOG00000003691	SRP54	100	89.484	Cavia_porcellus
ENSTTRG00000000928	SRP54	90	87.619	ENSCCAG00000024179	SRP54	100	87.828	Cebus_capucinus
ENSTTRG00000000928	SRP54	100	89.881	ENSCATG00000034083	SRP54	100	89.881	Cercocebus_atys
ENSTTRG00000000928	SRP54	100	89.881	ENSCLAG00000015076	SRP54	100	89.881	Chinchilla_lanigera
ENSTTRG00000000928	SRP54	100	89.881	ENSCSAG00000015575	SRP54	100	89.881	Chlorocebus_sabaeus
ENSTTRG00000000928	SRP54	95	93.971	ENSCHOG00000008986	SRP54	100	93.971	Choloepus_hoffmanni
ENSTTRG00000000928	SRP54	100	89.087	ENSCPBG00000026195	SRP54	100	89.087	Chrysemys_picta_bellii
ENSTTRG00000000928	SRP54	100	72.817	ENSCING00000007380	-	100	72.817	Ciona_intestinalis
ENSTTRG00000000928	SRP54	100	89.881	ENSCANG00000028532	SRP54	100	89.881	Colobus_angolensis_palliatus
ENSTTRG00000000928	SRP54	100	89.881	ENSCGRG00001009525	-	100	89.881	Cricetulus_griseus_chok1gshd
ENSTTRG00000000928	SRP54	76	86.753	ENSCGRG00000009453	-	89	86.753	Cricetulus_griseus_crigri
ENSTTRG00000000928	SRP54	100	85.913	ENSCSEG00000012392	srp54	100	85.913	Cynoglossus_semilaevis
ENSTTRG00000000928	SRP54	100	86.706	ENSCVAG00000010395	srp54	100	86.706	Cyprinodon_variegatus
ENSTTRG00000000928	SRP54	100	86.706	ENSDARG00000098367	srp54	100	86.706	Danio_rerio
ENSTTRG00000000928	SRP54	100	89.881	ENSDNOG00000032525	SRP54	100	89.881	Dasypus_novemcinctus
ENSTTRG00000000928	SRP54	89	73.884	ENSDORG00000005159	-	97	73.884	Dipodomys_ordii
ENSTTRG00000000928	SRP54	96	69.691	FBgn0010747	Srp54k	98	69.478	Drosophila_melanogaster
ENSTTRG00000000928	SRP54	69	68.421	ENSETEG00000012102	-	85	68.421	Echinops_telfairi
ENSTTRG00000000928	SRP54	100	88.889	ENSETEG00000016307	-	100	88.889	Echinops_telfairi
ENSTTRG00000000928	SRP54	100	79.167	ENSEBUG00000009437	-	100	79.167	Eptatretus_burgeri
ENSTTRG00000000928	SRP54	100	89.881	ENSEASG00005002057	SRP54	100	89.881	Equus_asinus_asinus
ENSTTRG00000000928	SRP54	99	89.558	ENSECAG00000018042	SRP54	98	89.558	Equus_caballus
ENSTTRG00000000928	SRP54	80	100.000	ENSEEUG00000001511	SRP54	80	100.000	Erinaceus_europaeus
ENSTTRG00000000928	SRP54	100	86.310	ENSELUG00000003395	srp54	100	86.310	Esox_lucius
ENSTTRG00000000928	SRP54	100	89.881	ENSFCAG00000032033	SRP54	100	89.881	Felis_catus
ENSTTRG00000000928	SRP54	100	88.690	ENSFALG00000005995	SRP54	100	88.690	Ficedula_albicollis
ENSTTRG00000000928	SRP54	100	89.881	ENSFDAG00000016767	SRP54	100	89.881	Fukomys_damarensis
ENSTTRG00000000928	SRP54	100	86.310	ENSFHEG00000004263	srp54	100	86.310	Fundulus_heteroclitus
ENSTTRG00000000928	SRP54	95	90.586	ENSGMOG00000011391	srp54	100	90.586	Gadus_morhua
ENSTTRG00000000928	SRP54	100	88.690	ENSGALG00000023135	SRP54	100	88.690	Gallus_gallus
ENSTTRG00000000928	SRP54	100	86.905	ENSGAFG00000011586	srp54	100	86.905	Gambusia_affinis
ENSTTRG00000000928	SRP54	100	86.111	ENSGACG00000004181	srp54	100	86.111	Gasterosteus_aculeatus
ENSTTRG00000000928	SRP54	100	89.087	ENSGAGG00000014766	SRP54	100	89.087	Gopherus_agassizii
ENSTTRG00000000928	SRP54	100	89.881	ENSGGOG00000002926	SRP54	100	89.881	Gorilla_gorilla
ENSTTRG00000000928	SRP54	100	86.706	ENSHBUG00000005678	srp54	100	86.706	Haplochromis_burtoni
ENSTTRG00000000928	SRP54	100	89.881	ENSHGLG00000002850	SRP54	100	89.881	Heterocephalus_glaber_female
ENSTTRG00000000928	SRP54	100	89.881	ENSHGLG00100005263	SRP54	100	89.881	Heterocephalus_glaber_male
ENSTTRG00000000928	SRP54	86	74.170	ENSHGLG00100007281	-	89	74.170	Heterocephalus_glaber_male
ENSTTRG00000000928	SRP54	100	85.119	ENSHCOG00000021127	srp54	100	85.119	Hippocampus_comes
ENSTTRG00000000928	SRP54	100	85.913	ENSIPUG00000001420	srp54	100	85.913	Ictalurus_punctatus
ENSTTRG00000000928	SRP54	100	89.881	ENSSTOG00000016023	SRP54	100	89.881	Ictidomys_tridecemlineatus
ENSTTRG00000000928	SRP54	87	65.682	ENSJJAG00000016404	-	100	65.682	Jaculus_jaculus
ENSTTRG00000000928	SRP54	100	84.921	ENSJJAG00000013417	-	100	84.921	Jaculus_jaculus
ENSTTRG00000000928	SRP54	100	86.310	ENSKMAG00000007707	srp54	100	86.310	Kryptolebias_marmoratus
ENSTTRG00000000928	SRP54	100	86.706	ENSLBEG00000018690	srp54	100	86.706	Labrus_bergylta
ENSTTRG00000000928	SRP54	100	86.706	ENSLBEG00000021122	srp54	100	86.706	Labrus_bergylta
ENSTTRG00000000928	SRP54	100	86.706	ENSLACG00000017890	SRP54	100	86.706	Latimeria_chalumnae
ENSTTRG00000000928	SRP54	100	87.103	ENSLOCG00000009440	srp54	100	87.103	Lepisosteus_oculatus
ENSTTRG00000000928	SRP54	100	89.881	ENSLAFG00000012007	SRP54	100	89.881	Loxodonta_africana
ENSTTRG00000000928	SRP54	100	89.881	ENSMFAG00000044371	SRP54	100	89.881	Macaca_fascicularis
ENSTTRG00000000928	SRP54	100	89.881	ENSMMUG00000015073	FAM177A1	100	89.881	Macaca_mulatta
ENSTTRG00000000928	SRP54	100	89.881	ENSMNEG00000006947	SRP54	100	89.881	Macaca_nemestrina
ENSTTRG00000000928	SRP54	100	89.881	ENSMLEG00000042251	SRP54	100	89.881	Mandrillus_leucophaeus
ENSTTRG00000000928	SRP54	100	86.706	ENSMAMG00000004803	srp54	100	86.706	Mastacembelus_armatus
ENSTTRG00000000928	SRP54	100	86.706	ENSMZEG00005027528	srp54	100	86.706	Maylandia_zebra
ENSTTRG00000000928	SRP54	100	83.992	ENSMGAG00000012481	SRP54	100	83.992	Meleagris_gallopavo
ENSTTRG00000000928	SRP54	100	89.881	ENSMAUG00000014447	-	100	89.881	Mesocricetus_auratus
ENSTTRG00000000928	SRP54	100	89.881	ENSMICG00000010270	SRP54	100	89.881	Microcebus_murinus
ENSTTRG00000000928	SRP54	87	88.409	ENSMOCG00000000948	-	100	88.409	Microtus_ochrogaster
ENSTTRG00000000928	SRP54	89	83.893	ENSMMOG00000020303	srp54	98	83.893	Mola_mola
ENSTTRG00000000928	SRP54	100	89.683	ENSMODG00000012925	-	100	89.683	Monodelphis_domestica
ENSTTRG00000000928	SRP54	100	89.683	ENSMODG00000023150	-	100	89.683	Monodelphis_domestica
ENSTTRG00000000928	SRP54	88	84.876	ENSMALG00000009163	srp54	98	84.876	Monopterus_albus
ENSTTRG00000000928	SRP54	100	89.881	MGP_CAROLIEiJ_G0017754	-	100	89.881	Mus_caroli
ENSTTRG00000000928	SRP54	100	89.087	ENSMUSG00000079108	Srp54c	100	89.087	Mus_musculus
ENSTTRG00000000928	SRP54	100	89.881	ENSMUSG00000073079	Srp54a	100	100.000	Mus_musculus
ENSTTRG00000000928	SRP54	100	89.881	ENSMUSG00000112449	Srp54b	100	89.881	Mus_musculus
ENSTTRG00000000928	SRP54	100	89.881	MGP_PahariEiJ_G0029510	-	100	89.881	Mus_pahari
ENSTTRG00000000928	SRP54	100	89.881	ENSMPUG00000016302	SRP54	100	89.881	Mustela_putorius_furo
ENSTTRG00000000928	SRP54	100	89.286	ENSMLUG00000008958	SRP54	100	89.286	Myotis_lucifugus
ENSTTRG00000000928	SRP54	100	89.881	ENSNGAG00000019806	-	100	89.881	Nannospalax_galili
ENSTTRG00000000928	SRP54	87	85.000	ENSNBRG00000006000	srp54	100	85.000	Neolamprologus_brichardi
ENSTTRG00000000928	SRP54	100	89.881	ENSNLEG00000003496	SRP54	100	89.881	Nomascus_leucogenys
ENSTTRG00000000928	SRP54	57	100.000	ENSMEUG00000000138	-	65	100.000	Notamacropus_eugenii
ENSTTRG00000000928	SRP54	51	100.000	ENSOPRG00000014502	-	53	100.000	Ochotona_princeps
ENSTTRG00000000928	SRP54	100	89.881	ENSODEG00000004865	SRP54	100	89.881	Octodon_degus
ENSTTRG00000000928	SRP54	100	86.706	ENSONIG00000011768	srp54	100	86.706	Oreochromis_niloticus
ENSTTRG00000000928	SRP54	100	89.881	ENSOANG00000014051	SRP54	100	89.881	Ornithorhynchus_anatinus
ENSTTRG00000000928	SRP54	100	89.286	ENSOCUG00000007838	SRP54	100	89.286	Oryctolagus_cuniculus
ENSTTRG00000000928	SRP54	100	86.508	ENSORLG00000010027	srp54	100	86.508	Oryzias_latipes
ENSTTRG00000000928	SRP54	100	86.508	ENSORLG00020001878	srp54	100	86.508	Oryzias_latipes_hni
ENSTTRG00000000928	SRP54	100	86.508	ENSORLG00015021866	srp54	100	86.508	Oryzias_latipes_hsok
ENSTTRG00000000928	SRP54	100	86.508	ENSOMEG00000020952	srp54	100	86.508	Oryzias_melastigma
ENSTTRG00000000928	SRP54	100	89.881	ENSOGAG00000012188	SRP54	100	89.881	Otolemur_garnettii
ENSTTRG00000000928	SRP54	100	89.881	ENSOARG00000007160	SRP54	100	89.881	Ovis_aries
ENSTTRG00000000928	SRP54	100	89.881	ENSPPAG00000017434	SRP54	100	89.881	Pan_paniscus
ENSTTRG00000000928	SRP54	89	100.000	ENSPPRG00000014047	SRP54	90	100.000	Panthera_pardus
ENSTTRG00000000928	SRP54	100	89.881	ENSPTIG00000000744	SRP54	96	89.881	Panthera_tigris_altaica
ENSTTRG00000000928	SRP54	100	89.881	ENSPTRG00000006259	FAM177A1	100	89.881	Pan_troglodytes
ENSTTRG00000000928	SRP54	100	89.881	ENSPANG00000023853	SRP54	100	89.881	Papio_anubis
ENSTTRG00000000928	SRP54	100	86.508	ENSPKIG00000001953	srp54	100	86.508	Paramormyrops_kingsleyae
ENSTTRG00000000928	SRP54	100	88.889	ENSPSIG00000006476	SRP54	100	88.889	Pelodiscus_sinensis
ENSTTRG00000000928	SRP54	91	83.043	ENSPMGG00000004127	srp54	99	83.043	Periophthalmus_magnuspinnatus
ENSTTRG00000000928	SRP54	100	77.183	ENSPEMG00000019634	-	100	77.183	Peromyscus_maniculatus_bairdii
ENSTTRG00000000928	SRP54	100	80.556	ENSPMAG00000006078	-	100	80.556	Petromyzon_marinus
ENSTTRG00000000928	SRP54	100	89.683	ENSPCIG00000016175	SRP54	100	89.683	Phascolarctos_cinereus
ENSTTRG00000000928	SRP54	100	86.905	ENSPFOG00000008870	srp54	100	86.905	Poecilia_formosa
ENSTTRG00000000928	SRP54	100	86.905	ENSPLAG00000009889	srp54	100	86.905	Poecilia_latipinna
ENSTTRG00000000928	SRP54	100	86.905	ENSPMEG00000008601	srp54	100	86.905	Poecilia_mexicana
ENSTTRG00000000928	SRP54	100	86.905	ENSPREG00000004505	srp54	100	86.905	Poecilia_reticulata
ENSTTRG00000000928	SRP54	100	84.722	ENSPPYG00000005739	SRP54	100	84.722	Pongo_abelii
ENSTTRG00000000928	SRP54	100	93.651	ENSPCAG00000006268	SRP54	100	93.651	Procavia_capensis
ENSTTRG00000000928	SRP54	100	87.921	ENSPCOG00000022473	SRP54	100	87.921	Propithecus_coquereli
ENSTTRG00000000928	SRP54	53	100.000	ENSPVAG00000010056	SRP54	69	100.000	Pteropus_vampyrus
ENSTTRG00000000928	SRP54	100	86.706	ENSPNYG00000009717	srp54	100	86.706	Pundamilia_nyererei
ENSTTRG00000000928	SRP54	100	86.310	ENSPNAG00000008544	srp54	100	86.310	Pygocentrus_nattereri
ENSTTRG00000000928	SRP54	100	89.683	ENSRNOG00000032776	Srp54a	100	89.683	Rattus_norvegicus
ENSTTRG00000000928	SRP54	100	89.881	ENSRROG00000041292	SRP54	100	89.881	Rhinopithecus_roxellana
ENSTTRG00000000928	SRP54	86	45.805	YPR088C	SRP54	95	42.146	Saccharomyces_cerevisiae
ENSTTRG00000000928	SRP54	94	89.241	ENSSBOG00000035145	SRP54	100	89.241	Saimiri_boliviensis_boliviensis
ENSTTRG00000000928	SRP54	58	100.000	ENSSHAG00000000671	SRP54	85	100.000	Sarcophilus_harrisii
ENSTTRG00000000928	SRP54	100	87.103	ENSSFOG00015013920	srp54	100	87.103	Scleropages_formosus
ENSTTRG00000000928	SRP54	100	81.273	ENSSMAG00000002441	srp54	100	81.273	Scophthalmus_maximus
ENSTTRG00000000928	SRP54	100	86.508	ENSSDUG00000018586	srp54	100	86.508	Seriola_dumerili
ENSTTRG00000000928	SRP54	100	86.508	ENSSLDG00000010476	srp54	100	86.508	Seriola_lalandi_dorsalis
ENSTTRG00000000928	SRP54	100	89.881	ENSSARG00000002744	SRP54	100	89.881	Sorex_araneus
ENSTTRG00000000928	SRP54	100	89.087	ENSSPUG00000013101	SRP54	100	89.087	Sphenodon_punctatus
ENSTTRG00000000928	SRP54	100	86.706	ENSSPAG00000002354	srp54	100	86.706	Stegastes_partitus
ENSTTRG00000000928	SRP54	100	89.881	ENSSSCG00000001955	SRP54	100	89.881	Sus_scrofa
ENSTTRG00000000928	SRP54	94	87.975	ENSTGUG00000011945	-	95	87.975	Taeniopygia_guttata
ENSTTRG00000000928	SRP54	100	86.111	ENSTRUG00000007057	srp54	100	86.111	Takifugu_rubripes
ENSTTRG00000000928	SRP54	100	85.714	ENSTNIG00000002589	srp54	100	85.714	Tetraodon_nigroviridis
ENSTTRG00000000928	SRP54	89	80.089	ENSTBEG00000011409	SRP54	100	80.089	Tupaia_belangeri
ENSTTRG00000000928	SRP54	52	80.534	ENSUAMG00000012385	SRP54	100	80.534	Ursus_americanus
ENSTTRG00000000928	SRP54	100	89.881	ENSUMAG00000011234	SRP54	100	89.881	Ursus_maritimus
ENSTTRG00000000928	SRP54	94	89.030	ENSVPAG00000005668	SRP54	100	89.030	Vicugna_pacos
ENSTTRG00000000928	SRP54	100	89.881	ENSVVUG00000019962	SRP54	100	89.881	Vulpes_vulpes
ENSTTRG00000000928	SRP54	73	98.137	ENSXETG00000012290	srp54	100	73.242	Xenopus_tropicalis
ENSTTRG00000000928	SRP54	88	85.553	ENSXCOG00000004658	srp54	96	85.553	Xiphophorus_couchianus
ENSTTRG00000000928	SRP54	100	86.905	ENSXMAG00000018315	srp54	100	86.905	Xiphophorus_maculatus